EY736000

Overview
NameEY736000
Unique NameEY736000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.615e-14
Identity = 46/121 (38.02%), Postives = 61/121 (50.41%), Query Frame = 2
Query:  428 TAVHGVTKFSDLTPSEFRRQFLGLNRRL--RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGG 784
            TA +GV +FS L P EF+  +LG       R PA+ Q+   +P   LP  FDWRD   V  V++   CG CW+ S   A+E A  +    L  LS QQ++DC            +SGC GG
Sbjct:   55 TAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP--IPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGG 164          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.615e-14
Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = 2
Query:  308 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 805
            + L+K    K Y ++ +   R  +++ NL++     L      H     +    D+T  E  ++  GL      P+ +     L T +    +P   D+R  G VT V++ G CGSCW+ S+ GALEG     TG+L++LS Q LVDC  E         + GC GG M +AF+
Sbjct:   26 WELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVP---PSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSE---------NYGCGGGYMTTAFQ 187          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.639e-14
Identity = 63/204 (30.88%), Postives = 93/204 (45.59%), Query Frame = 2
Query:  290 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTN-----DLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSG----------CNGGLMNSAFE*YSRLVGL 829
            L+ +  +  +K K+ K Y+ +EE   R  V++ N+++     +   L   T    +  F+D+T  EF+   +G      N   RL   A  +   P +      LP   DWR+ G VT V+  G C SCW+   TGA+EG  F  TG+L+ LS Q L+DC     P+ +  C  G           NGGL   A   Y R  G+
Sbjct:   23 LSLDVQWQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGS-FFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCS---KPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGV 221          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13
Identity = 53/130 (40.77%), Postives = 65/130 (50.00%), Query Frame = 2
Query:  458 DLTPSEFRRQFLGL---------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRL 820
            D+T  E  R   GL         N  L +P  + +AP           DWR  G VT V+D G CGSCW+ S+ GALEG     TG+L+SLS Q LV C          S ++GC GG M +AFE Y RL
Sbjct:   85 DMTSEEVVRTMTGLRVPRSRPRPNGTLYVPDWSSRAPAA--------VDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC---------VSNNNGCGGGYMTNAFE-YVRL 196          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 2
Query:  563 PTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 805
            P   DWRD GAVT V++   CGSCW+ S    +EG + + TG+L+SLSEQ+L+DCD             GC GG    + +
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR---------SHGCKGGYQTGSIQ 73          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 2
Query:  560 LPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 805
            LP   DWR  GAVT V++ G+CGSCW+ S    +E  + + TG L+SLSEQ+LVDCD +         + GC GG    A++
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK---------NHGCLGGAFVFAYQ 73          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.629e-12
Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 2
Query:  563 PTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 805
            P   DWR+ GAVT V++   CGSCW+ S    +EG + + TG+L+SLSEQ+L+DC++            GC+GG    + +
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR---------SHGCDGGYQTPSLQ 73          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 49/153 (32.03%), Postives = 71/153 (46.41%), Query Frame = 2
Query:  308 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDC--DHEC 739
            F  FK  F+K Y T E      + F A+L        ++      + +FSD++  EF+ Q+L        L +   L A AQ   I   N +P + D R  G VT +++  ACGSCW+ S    +E  +       + LSEQ+LVDC   H C
Sbjct:   26 FEEFKKAFNKHYVTPEAEQEARQNFLASLEH------IEKAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVN-IPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDCASQHGC 171          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 50/173 (28.90%), Postives = 78/173 (45.09%), Query Frame = 2
Query:  308 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 805
            F  FK  F+KTYAT E+ +   + F  +L+  +  +         +   SDL+  EF+ QFL        L  +  L A+     I   + LP++ D R    VT ++  G CGSCW+ S   + E A+       + L+EQ+LVDC          +  +GC+G  +    E
Sbjct:   26 FEEFKKAFNKTYATPEKEEVARKNFLESLKYVESNK-------GAINHLSDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVS-LPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC----------ASQNGCHGDTIPRGIE 180          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 57/183 (31.15%), Postives = 87/183 (47.54%), Query Frame = 2
Query:  281 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 805
            D  L+AE  +  +K K++K+Y+ +EE   R  V++  L+  K     +    +G T    +F D T  EFR+  + ++    R  +     +   ILP        DWR  G VT V+  G C +CW+ + TGA+E      TG+L  LS Q LVDC            ++GC GG   +AF+
Sbjct:   22 DSSLDAE--WQDWKIKYNKSYSLKEEKLKRV-VWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSILPKF-----VDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDC-------SKPQGNNGCLGGDTYNAFQ 189          
The following BLAST results are available for this feature:
BLAST of EY736000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
CATO_MOUSE6.615e-1438.02Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATK_RAT6.615e-1431.03Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATQ_RAT8.639e-1430.88Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATK_CHICK3.283e-1340.77Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
MEX2_JACME4.288e-1341.98Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
ERVC_TABDI4.288e-1343.90Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
MEX1_JACME1.629e-1239.51Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
PEPT1_PSOOV2.779e-1232.03Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
PEPT1_EURMA4.741e-1228.90Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CATR_MOUSE4.741e-1231.15Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-G06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736000 ID=EY736000; Name=EY736000; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAGAAATTAGGTGTC
GAAATCTCATAAGCGGACCCAACCACAAGTTTCTTCTGTCTTTTTGGAAA
CATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTGAAACAAATCAAA
AATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCCTCCTATCTGCTG
TGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCTATGATCAGACAG
GTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCTCCTGAACGCGGA
GCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACTTACGCCACTC
AGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAACCTCCGCCGA
GCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACGGTGTCACCAA
GTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGCTTGA
ATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCTCCTATCCTCCCT
ACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCGTTAC
TGGCGTTCAAGACCNAGGCGCATGTGGATCGTGCTGGTCGTNTAGTGCAA
CCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGTCAGC
CTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAGAGGA
ATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCTGCCT
TTGAGTAATACTCAAGGCTGGTGGGGTTGANCGAAANAAAGGATACCCTT
ACC
back to top