EY736000

Overview
NameEY736000
Unique NameEY736000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.191e-12
Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = 2
Query:  308 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDC--DHEC 739
            F  FK  F+K YAT EE +   + F  +L+  +  +         +   SDL+  EF+ ++L        L  +  L A+     I   N +P++ D R    VT ++  G CGSCW+ S   A E A+       + LSEQ+LVDC   H C
Sbjct:   26 FEEFKKAFNKNYATVEEEEVARKNFLESLKYVEANK-------GAINHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVN-VPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDCASQHGC 170          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.191e-12
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 2
Query:  560 LPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 805
            +P   DWRD+GAV  V++ G CG CW+ +A   +EG + +  G LV LSEQ+++DC          +   GC GG +N A++
Sbjct:    2 VPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC----------AVSYGCKGGWVNRAYD 73          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.086e-12
Identity = 60/215 (27.91%), Postives = 95/215 (44.19%), Query Frame = 2
Query:  242 IRQV--VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFR---------RQFLGLNRRLRLPADAQKAPILPTN-----------DLPT----DFDWRDHGAVTGVQDXGA-CGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 805
            IRQ   + SD E   D L+     F  F  K+ K + + ++   RF  F+ N    K  +  +P ++  + KFSDL+  EF+         + +  L++ L     + K PI  +            DL      + +W    AV+ ++D G  CGSCW+ S+  ++E  + L   +   LSEQ+LV+CD             GC GGL  +A E
Sbjct:  100 IRQTGKITSDAESELDMLIE----FDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVKTHKPTEPYSLD-LNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCD---------KSSMGCAGGLPITALE 300          
The following BLAST results are available for this feature:
BLAST of EY736000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
PEPT1_DERFA6.191e-1231.37Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
MDO1_PSEMR6.191e-1239.02Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CYSP_THEAN8.086e-1227.91Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-G06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736000 ID=EY736000; Name=EY736000; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAGAAATTAGGTGTC
GAAATCTCATAAGCGGACCCAACCACAAGTTTCTTCTGTCTTTTTGGAAA
CATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTGAAACAAATCAAA
AATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCCTCCTATCTGCTG
TGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCTATGATCAGACAG
GTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCTCCTGAACGCGGA
GCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACTTACGCCACTC
AGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAACCTCCGCCGA
GCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACGGTGTCACCAA
GTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGCTTGA
ATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCTCCTATCCTCCCT
ACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCGTTAC
TGGCGTTCAAGACCNAGGCGCATGTGGATCGTGCTGGTCGTNTAGTGCAA
CCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGTCAGC
CTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAGAGGA
ATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCTGCCT
TTGAGTAATACTCAAGGCTGGTGGGGTTGANCGAAANAAAGGATACCCTT
ACC
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