EY735990

Overview
NameEY735990
Unique NameEY735990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735990 vs. ExPASy Swiss-Prot
Match: GPI8_BOVIN (GPI-anchor transamidase OS=Bos taurus GN=PIGK PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 8.310e-18
Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 3
Query:  162 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDV 359
            WAVL+  S  ++NYRH A+    Y+ +++ G+ D +I++ + DD+A N  NP+P  + +H       +GDDV
Sbjct:   46 WAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDDV 117          

HSP 2 Score: 53.5286 bits (127), Expect = 8.310e-18
Identity = 33/112 (29.46%), Postives = 54/112 (48.21%), Query Frame = 1
Query:  385 RGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFILYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLISMHHSFNAEES 720
            R  +VTVENF  V+ G   + T  S +++ S    +I I  + HGG G L    S  I   EL D  ++      Y  L+F ++ C+  S++E      ++++  S   E+S
Sbjct:  122 RSYEVTVENFLRVLTGRIPSSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSPNIMALASSQVGEDS 232          
BLAST of EY735990 vs. ExPASy Swiss-Prot
Match: GPI8_PONAB (GPI-anchor transamidase OS=Pongo abelii GN=PIGK PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.080e-17
Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 3
Query:  162 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDV 359
            WAVL+  S  ++NYRH A+    Y+ +++ G+ D +I++ + DD+A N  NP+P  + +H       +GDDV
Sbjct:   46 WAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDDV 117          

HSP 2 Score: 52.7582 bits (125), Expect = 1.080e-17
Identity = 33/112 (29.46%), Postives = 53/112 (47.32%), Query Frame = 1
Query:  385 RGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFILYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLISMHHSFNAEES 720
            R  +VTVENF  V+ G     T  S +++ S    +I I  + HGG G L    S  I   EL D  ++      Y  L+F ++ C+  S++E      ++++  S   E+S
Sbjct:  122 RSYEVTVENFLRVLTGRIPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSPNIMALASSQVGEDS 232          
BLAST of EY735990 vs. ExPASy Swiss-Prot
Match: GPI8_HUMAN (GPI-anchor transamidase OS=Homo sapiens GN=PIGK PE=1 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 1.080e-17
Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 3
Query:  162 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDV 359
            WAVL+  S  ++NYRH A+    Y+ +++ G+ D +I++ + DD+A N  NP+P  + +H       +GDDV
Sbjct:   46 WAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDDV 117          

HSP 2 Score: 52.7582 bits (125), Expect = 1.080e-17
Identity = 33/112 (29.46%), Postives = 53/112 (47.32%), Query Frame = 1
Query:  385 RGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFILYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLISMHHSFNAEES 720
            R  +VTVENF  V+ G     T  S +++ S    +I I  + HGG G L    S  I   EL D  ++      Y  L+F ++ C+  S++E      ++++  S   E+S
Sbjct:  122 RSYEVTVENFLRVLTGRIPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSPNIMALASSQVGEDS 232          
BLAST of EY735990 vs. ExPASy Swiss-Prot
Match: GPI8_CAEEL (Putative GPI-anchor transamidase OS=Caenorhabditis elegans GN=T05E11.6 PE=1 SV=3)

HSP 1 Score: 62.003 bits (149), Expect = 3.104e-17
Identity = 33/97 (34.02%), Postives = 54/97 (55.67%), Query Frame = 3
Query:  108 NGGGGAKVNDDDDSVG--TRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVY-KGVPKDYTG 389
            N G   K+++  D+ G    WAVL+  S  ++NYRH +++   Y  +++ G+ D NII+ + +D+  N  NPRPG +     G ++Y   V  DY G
Sbjct:   19 NTGLQLKIDELFDTPGHTNNWAVLVCTSKFWFNYRHVSNVLALYHSIKRLGIPDSNIIMMLAEDVPCNSRNPRPGTVYAARAGTNLYGSDVEVDYRG 115          

HSP 2 Score: 47.7506 bits (112), Expect = 3.104e-17
Identity = 28/112 (25.00%), Postives = 53/112 (47.32%), Query Frame = 1
Query:  385 RGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFILYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLISMHHSFNAEES 720
            RGE+VTVE+F  V+ G     T  S +++ +    ++ I  + HGG   +    S  +   +L   ++       Y  ++   ++C S S++E +    ++S+  S   EES
Sbjct:  114 RGEEVTVESFIRVLTGRHHPATPRSKRLL-TDHQSNVLIYLTGHGGDSFMKFQDSEELTNVDLAYAIQTMFEDNRYHEMLVIADSCRSASMYEWIDSPNVLSLSSSLTHEES 224          
BLAST of EY735990 vs. ExPASy Swiss-Prot
Match: GPI8_YEAST (GPI-anchor transamidase OS=Saccharomyces cerevisiae GN=GPI8 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.145e-16
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 3
Query:  162 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINH-PHGDDVY-KGVPKDYTG 389
            WAVL++ S  ++NYRH A++   Y+ +++ G+ D  II+ + DD+A N  N  PG + N+  H  D+Y   V  DY G
Sbjct:   39 WAVLVSTSRFWFNYRHMANVLSMYRTVKRLGIPDSQIILMLSDDVACNSRNLFPGSVFNNKDHAIDLYGDSVEVDYRG 116          

HSP 2 Score: 48.1358 bits (113), Expect = 1.145e-16
Identity = 27/114 (23.68%), Postives = 58/114 (50.88%), Query Frame = 1
Query:  385 RGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFILYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLISMHHSFNAEESSW 726
            RG +VTVENF  ++    T     S +++ +  N +IFI  + HGG   L    +  I ++++ D  ++ +    Y  + F ++ C++ +++       ++++  S   +ESS+
Sbjct:  115 RGYEVTVENFIRLLTDRWTEDHPKSKRLL-TDENSNIFIYMTGHGGDDFLKFQDAEEIASEDIADAFQQMYEKKRYNEIFFMIDTCQANTMYSKFYSPNILAVGSS-EMDESSY 226          
The following BLAST results are available for this feature:
BLAST of EY735990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GPI8_BOVIN8.310e-1836.11GPI-anchor transamidase OS=Bos taurus GN=PIGK PE=2... [more]
GPI8_PONAB1.080e-1736.11GPI-anchor transamidase OS=Pongo abelii GN=PIGK PE... [more]
GPI8_HUMAN1.080e-1736.11GPI-anchor transamidase OS=Homo sapiens GN=PIGK PE... [more]
GPI8_CAEEL3.104e-1734.02Putative GPI-anchor transamidase OS=Caenorhabditis... [more]
GPI8_YEAST1.145e-1638.46GPI-anchor transamidase OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-F06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735990 ID=EY735990; Name=EY735990; organism=Citrus sinensis; type=EST; length=844bp
CACGCGTCCGCACGCTCCTAGTCGCTCTTGCAGGAATCGCCGATGGAAGC
AGAGACATAGCAGGTGACATTCTGAAGCTACCATCGGAAGCCTATAGGTT
CTTCCATAATGGTGGGGGAGGGGCAAAGGTCAACGATGATGATGATTCTG
TCGGCACGAGATGGGCCGTCCTGCTTGCCGGATCTAATGGCTTCTGGAAT
TACAGGCATCAGGCTGATATTTGTCATGCTTATCAACTCTTGAGGAAAGG
TGGGCTGAAGGATGAAAATATTATTGTTTTCATGTATGATGACATCGCTT
TCAATGAAGAGAACCCAAGGCCTGGAGTCATCATTAACCACCCCCATGGC
GATGATGTTTACAAAGGAGTTCCAAAGGATTACACGGGGGGAAGATGTTA
CTGTTGAAAACTTTTTTGCTGTTGTCCTGGGAAATAAAACAGCTCTTACA
GGGGGCAGTGGGAAGGTTGTGGATAGCGGCCCCAATGATCATATTTTCAT
ATTGTACTCAGATCATGGTGGCCCTGGGGTGCTAGGGATGCCCACCAGTC
GATACATATATGCTGATGAACTGATCGATGTCTTAAAAAAGAAGCATGCT
TCTGGGAACTACAAAAGCTTGGTATTTTATCTCGAAGCCTGTGAATCTGG
AAGTATCTTTGAGGGTCTGCTTCCTGAGGGCTTAATATCTATGCACCACA
GCTTCAATGCTGAAGAGAGCAGTTGGGGGGGACTATTGTCTGGGAAAAAT
CCCGGTCCCCCCCGTAATATAGCACTTGTTGGGGTGACTGTATAGTATTG
CTGGATGGAGGAAGTTACATACCCACTTGCCGGACAAAACTCTT
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