EY735921

Overview
NameEY735921
Unique NameEY735921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_RHIRD (1-aminocyclopropane-1-carboxylate deaminase OS=Rhizobium radiobacter GN=acdS PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.438e-24
Identity = 66/183 (36.07%), Postives = 104/183 (56.83%), Query Frame = 3
Query:   30 NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            + E+W KR+D  SG+ + GNK+RKLE+++ DA+A  AD +++IGG+QSNH R  A  A  L + C L+  +     D     +GN+L+ RL+GA   ++  ++   IG         + ++ EG +PY IP G S +  G  GY+   +E+ +  Q    G KFD I+V   +G T AG+ +G
Sbjct:   30 DVEIWAKREDCNSGLAMGGNKLRKLEYIVPDAIASNADTLVSIGGVQSNHTRMVAAVAAKLGMKCRLVQESWVPHEDAVYDRVGNILMTRLMGADSRIV--DDGFDIGIRQSWEDAIQSVIDEGGKPYAIPAGASVHKYGGLGYVAFAEEVAR--QEADLGFKFDYIIVCVVTGSTQAGMIVG 208          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_SCHPO (Probable 1-aminocyclopropane-1-carboxylate deaminase OS=Schizosaccharomyces pombe GN=SPAC922.03 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.217e-23
Identity = 95/286 (33.22%), Postives = 142/286 (49.65%), Query Frame = 3
Query:   36 EVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVMLFLFVMTPITSSTIPKAYLMGSMQELTPVQLLTF--NMRRVLGMEVDLWR-DLFLSEISSSEGWGV*Y--TVGARR--GGGEGVLVVPKLE 857
            E++ KR+D  SG+   GNK+RKLE+L+ +A+  G D +++IGGIQSN  R  A  A +L LDC LI        D     +GN+ + R+V A + L S +    IG         E+L K+G++P+ IP G S      +G  G +E I E E+QL     G KFD IVV   +G + AG+ +G  L   +  V+        I +S  P         E T  Q+L    N  +++G+E +L   D+ +    +   +G+    T+ A +  G  EGVL  P  E
Sbjct:   33 EIFAKREDCNSGLAFGGNKIRKLEYLIPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGLDCVLIQEDWVDYKDTMYDRVGNIELSRIVNADVRLDSSK--FDIGIRPSFKNALEELTKKGKKPFPIPAGCSEHPYGGLGFVGCVEEIYEQEKQL-----GFKFDKIVVCTVTGSSFAGIIVGMALTGRQKDVI-------GIDASATP---------EKTKAQVLRIAQNTAKLIGLEKELTESDVNIDTRFAHPAYGIPNEGTIEAIKLCGATEGVLTDPVYE 295          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCM (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=acdS PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.076e-23
Identity = 69/190 (36.32%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    E++ KR+D  SG+   GNK RKLE+L+ DA+AQGAD +++IGG+QSN  R  A  A +L + C L+        D     +GN+ + R++GA + L++  +   IG         E + + G +PY IP G S      +G  G+ E ++E E QL     G KFD +VV   +G T AG+ +G
Sbjct:   27 HLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVA--DGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVREQEAQL-----GFKFDYVVVCSVTGSTQAGMVVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_BRAJA (1-aminocyclopropane-1-carboxylate deaminase OS=Bradyrhizobium japonicum GN=acdS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.711e-23
Identity = 66/187 (35.29%), Postives = 104/187 (55.61%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L  N E++ KR+D  SG+   GNK+RKLE+++ DA+A  AD +++IGG+QSNH R  A  A  + + C L+        D     +GN+++ R++GA + L+  ++   IG         E++   G +PY IP G S +  G  GY+   +E+ +  Q    G KFD IVV   +G T AG+ +G
Sbjct:   26 HLGGNVEIYAKREDCNSGLAYGGNKLRKLEYIIPDAIASNADTLVSIGGVQSNHTRMIAAVAAKIGMKCRLVQEAWVPHEDAVYDRVGNIMLSRIMGADVRLV--DDGFDIGIRKSWEQAIEEVKAAGGKPYAIPAGASVHKYGGLGYVGFAEEVRK--QEAELGFKFDYIVVCTVTGSTHAGMLVG 208          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCC (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia cenocepacia (strain MC0-3) GN=acdS PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.625e-23
Identity = 69/190 (36.32%), Postives = 103/190 (54.21%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    E++ KR+D  SG+   GNK RKLE+L+ DA+AQGAD +++IGG+QSN  R  A  A +L + C L+        D     +GN+ + R++GA + L+S  +   IG         E + + G +PY IP G S      +G  G+ E ++  E QL     G KFD +VV   +G T AG+ +G
Sbjct:   27 HLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVS--DGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVRAQEAQL-----GFKFDYVVVCSVTGSTQAGMVVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_BURVG (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=acdS PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 68/190 (35.79%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    E++ KR+D  SG+   GNK RKLE+L+ DA+AQGAD +++IGG+QSN  R  A  A +L + C L+        D     +GN+ + R++GA + L++  +   IG         E + + G +PY IP G S      +G  G+ E ++E E QL     G +FD +VV   +G T AG+ +G
Sbjct:   27 HLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYDDPVYDRVGNIQLSRMMGADVRLVA--DGFDIGIRRSWEDAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVREQEAQL-----GFRFDYVVVCSVTGSTQAGMVVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCH (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia cenocepacia (strain HI2424) GN=acdS PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.030e-22
Identity = 68/190 (35.79%), Postives = 103/190 (54.21%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    +++ KR+D  SG+   GNK RKLE+L+ DA+AQGAD +++IGG+QSN  R  A  A +L + C L+        D     +GN+ + R++GA + L+S  +   IG         E + + G +PY IP G S      +G  G+ E ++  E QL     G KFD +VV   +G T AG+ +G
Sbjct:   27 HLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVS--DGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVRAQEAQL-----GFKFDYVVVCSVTGSTQAGMVVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCA (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia cenocepacia (strain AU 1054) GN=acdS PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.030e-22
Identity = 68/190 (35.79%), Postives = 103/190 (54.21%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    +++ KR+D  SG+   GNK RKLE+L+ DA+AQGAD +++IGG+QSN  R  A  A +L + C L+        D     +GN+ + R++GA + L+S  +   IG         E + + G +PY IP G S      +G  G+ E ++  E QL     G KFD +VV   +G T AG+ +G
Sbjct:   27 HLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVS--DGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVRAQEAQL-----GFKFDYVVVCSVTGSTQAGMVVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_AGRRK (1-aminocyclopropane-1-carboxylate deaminase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=acdS PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.030e-22
Identity = 65/190 (34.21%), Postives = 106/190 (55.79%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    +++ KR+D  SG+   GNK+RKLE+++ DA+A  AD +++IGG+QSNH R  A  A  +   C L+  +     D     +GN+L+ R++GA ++++  +E   IG         E +  +G +PY IP G S      +G  G+ E ++  E++L     G KFD IVV   +G T AG+++G
Sbjct:   26 HLGGKVQLYAKREDCNSGLAFGGNKLRKLEYIIPDAIASNADTLVSIGGVQSNHTRMIAAVAAKIGFKCRLVQESWVPHEDAVYDRVGNILLSRIMGADVQMV--DEGFDIGIRQSWEEAIEDVKAKGGKPYPIPAGASVHKYGGLGYVGFAEEVRVQEEEL-----GFKFDYIVVCTVTGSTHAGMTVG 208          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_METNO (1-aminocyclopropane-1-carboxylate deaminase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=acdS PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.346e-22
Identity = 65/187 (34.76%), Postives = 104/187 (55.61%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    E++ KR+D  SG+   GNK+RKLE+++ DA+A GAD +++IGG+QSNH R  A  A  + + C L+        D     +GN+++ R++GA + L+  ++   IG  +      + +  +G RPY IP G S +  G  GY+   +E+  + Q    G  FD IVV   +G T AG+ +G
Sbjct:   26 HLGGQVELYAKREDCNSGLAFGGNKLRKLEYIVPDAIASGADTLVSIGGVQSNHTRMVAAVAAKIGMKCRLVQEAWVPHEDAVYDRVGNIMLSRILGADVRLV--DDGFDIGIRSSWQEAIDDVKAKGGRPYAIPAGASVHKFGGLGYVGFAEEV--RAQERDLGFTFDYIVVCTVTGSTHAGMVVG 208          
The following BLAST results are available for this feature:
BLAST of EY735921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
1A1D_RHIRD1.438e-2436.071-aminocyclopropane-1-carboxylate deaminase OS=Rhi... [more]
1A1D_SCHPO1.217e-2333.22Probable 1-aminocyclopropane-1-carboxylate deamina... [more]
1A1D_BURCM2.076e-2336.321-aminocyclopropane-1-carboxylate deaminase OS=Bur... [more]
1A1D_BRAJA2.711e-2335.291-aminocyclopropane-1-carboxylate deaminase OS=Bra... [more]
1A1D_BURCC4.625e-2336.321-aminocyclopropane-1-carboxylate deaminase OS=Bur... [more]
1A1D_BURVG6.040e-2335.791-aminocyclopropane-1-carboxylate deaminase OS=Bur... [more]
1A1D_BURCH1.030e-2235.791-aminocyclopropane-1-carboxylate deaminase OS=Bur... [more]
1A1D_BURCA1.030e-2235.791-aminocyclopropane-1-carboxylate deaminase OS=Bur... [more]
1A1D_AGRRK1.030e-2234.211-aminocyclopropane-1-carboxylate deaminase OS=Agr... [more]
1A1D_METNO1.346e-2234.761-aminocyclopropane-1-carboxylate deaminase OS=Met... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735921 ID=EY735921; Name=EY735921; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGCTCCCTAATTTGCCCCATAATACTGAGGTCTGGCTCAAG
CGTGATGACCTTTCCGGCATGCAATTGAGTGGAAACAAGGTAAGGAAATT
AGAGTTTTTGATGGCAGATGCAGTGGCTCAAGGTGCTGATTGCATCATCA
CCATTGGAGGCATCCAAAGCAATCATTGTCGTGCTGCTGCCGTTGCTGCC
AAGTATCTCAATCTTGATTGTTATCTTATTCTTCGTACCTCTAAGGTTCT
GGTGGACCAAGATCCTGGTTTGATCGGCAATCTACTAGTTGAACGTTTAG
TTGGAGCTCATATTGAACTTATCTCTAAAGAAGAGTATTCAAAAATTGGG
AGTGTGACTCTTACTAACATTTTAAAAGAAAAGTTGCTAAAGGAAGGGAG
AAGACCATATGTTATTCCTGTTGGTGGATCAAACTCAATAGGGACATGGG
GTTATATTGAAGCAATTAAGGAGATTGAGCAGCAACTTCAGACTGGGACT
GGTGGAGTGAAATTTGATGATATTGTTGTAGCTTGTGGCAGTGGAGGAAC
AATTGCTGGTTTGTCATTGGGGTCATGGCTTGGAACATTGAAAGCAAAAG
TCATGCTTTTTCTGTTTGTGATGACCCCGATTACTTCTTCGACTATACCC
AAGGCCTACTTGATGGGCTCAATGCAGGAGTTGACTCCCGTGCAATTGTT
AACATTCAACATGCGAAGGGTGCTAGGTATGGAAGTAGACCTTTGGAGGG
ACCTATTTTTGTCAGAAATTTCGTCCAGCGAAGGGTGGGGAGTCTGATAC
ACAGTAGGCGCGAGAAGGGGGGGCGGGGAGGGTGTGTTAGTGGTGCCTAA
GTTGGAGAANTN
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