EY735921

Overview
NameEY735921
Unique NameEY735921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_VARPS (1-aminocyclopropane-1-carboxylate deaminase OS=Variovorax paradoxus (strain S110) GN=acdS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19
Identity = 65/190 (34.21%), Postives = 97/190 (51.05%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    E++ KR+D  SG+   GNK RKLE+L+ +A+  G D +++IGGIQSN  R  A  A +L L C L+        D     +GN+ + R++GA + L S      IG           + K G +P+ IP G S      +G  G+ E +++ E +L     G KFD IV    +G T AG+ +G
Sbjct:   27 HLGGEVELYAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDSAG--FDIGIRKSWEEAMADVRKAGGKPFPIPAGCSEHPRGGLGFVGFAEEVRQQEAEL-----GFKFDYIVTCSVTGSTQAGMVVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_PSESM (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. tomato GN=acdS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18
Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    +++ KR+D  SG+   GNK RKLE+L+ +A+  G D +++IGGIQSN  R  A  A +L + C L+        D     +GN+ + R++GA + L S      IG           +++ G +P+ IP G S +  G  G++    E+ QQ +    G KFD IVV   +G T AG+ +G
Sbjct:   27 HLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLVPEAIEGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDSAG--FDIGIRPSWEKAMADVVESGGKPFPIPAGCSEHPYGGLGFVRFADEVRQQEE--ELGFKFDYIVVCSVTGSTHAGMLVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_PSE14 (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=acdS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.540e-18
Identity = 64/187 (34.22%), Postives = 97/187 (51.87%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    E++ KR+D  SG+   GNK RKLE+L+ +A+  G D +++IGGIQSN  R  A  A +L + C L+        D     +GN+ + R++GA + L S      IG           + + G +P+ IP G S +  G  G++    E+ QQ +    G KFD IVV   +G T AG+ +G
Sbjct:   27 HLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDSAG--FDIGIRPSWEKAMSDVEESGGKPFPIPAGCSEHPYGGLGFVRFADEVRQQEE--ELGFKFDYIVVCSVTGSTHAGMLVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_ACIAC (1-aminocyclopropane-1-carboxylate deaminase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=acdS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.540e-18
Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    E++ KR+D  SG+   GNK RKLE+L+ +A+  G D +++IGGIQSN  R  A  A +L + C L+        D     +GN+ + R++GA + L +      IG         E + + G +P+ IP G S +  G  G++   +E+ QQ +    G +FD IVV   +G T AG+ +G
Sbjct:   27 HLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIEGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDAAG--FDIGIRPSWEQAMEDVRRAGGKPFPIPAGCSEHPRGGLGFVAFAEEVRQQEE--ELGFQFDYIVVCSVTGSTQAGMVVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_PSEU2 (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=acdS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.011e-18
Identity = 64/187 (34.22%), Postives = 97/187 (51.87%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    E++ KR+D  SG+   GNK RKLE+L+ +A+  G D +++IGGIQSN  R  A  A +L + C L+        D     +GN+ + R++GA + L S      IG           + + G +P+ IP G S +  G  G++    E+ QQ +    G KFD IVV   +G T AG+ +G
Sbjct:   27 HLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDSAG--FDIGIRPSWEKAMADVEESGGKPFPIPAGCSEHPYGGLGFVRFADEVRQQEE--ELGFKFDYIVVCSVTGSTHAGMLVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_CRYNE (Probable 1-aminocyclopropane-1-carboxylate deaminase OS=Cryptococcus neoformans GN=CNB00190 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.011e-18
Identity = 69/207 (33.33%), Postives = 109/207 (52.66%), Query Frame = 3
Query:   12 LPNLPH----NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGL---IGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVM 605
            LPNL        +++ KR+D  SG+   GNKVRKLE+L+ADA A+G + ++++GG+QSNH RA    A    L    +    +  V  DP L    GN+L+ RL+G  + L   +E   I     T    + +  +G +PY IP G S + +G  G+   + E+ +Q +    GV FD ++V   +G + AG  +G+     K K++
Sbjct:   28 LPNLTAVLGGKVKLYAKREDCNSGLAYGGNKVRKLEYLVADAKAKGCNTLVSVGGVQSNHTRAVTAVAVASGLKAVTV---QEKWVPIDPPLYSETGNILLSRLMGGDVRL--NQETFDIRHKKATEDAFKDVEAKGGKPYYIPAGASDHPLGGLGFTNWVVELAKQEK--ELGVFFDVVIVCSVTGSSHAGTVVGAVAEGRKRKII 227          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_VARPD (1-aminocyclopropane-1-carboxylate deaminase OS=Variovorax paradoxus GN=acdS PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18
Identity = 62/190 (32.63%), Postives = 98/190 (51.58%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L    +++ KR+D  SG+   GNK RKLE+L+ +A+  G D +++IGGIQSN  R  A  A +L L C L+        D     +GN+ + R++GA + L +      IG           +   G +P+ IP G S      +G+ G+ E +++ E +L     G KFD +VV   +G T AG+ +G
Sbjct:   27 HLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDAAG--FDIGIRQSWEQAMADVRAAGGKPFPIPAGCSEHPRGGLGSVGFAEEVRQQEAEL-----GFKFDYLVVCSVTGSTQAGMVVG 209          
BLAST of EY735921 vs. ExPASy Swiss-Prot
Match: 1A1D_WILSA (1-aminocyclopropane-1-carboxylate deaminase OS=Williopsis saturnus PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.223e-17
Identity = 67/192 (34.90%), Postives = 102/192 (53.12%), Query Frame = 3
Query:   18 NLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGL---IGNLLVERLVGAHIELISKEEYSKIG-SVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKE-IEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLG 572
            +L     V+ KR+D  SG+   GNK+RKLE+++ D V      +++IGG QSN  R  A  A  L   C LI      + + +  +   +GN+ + R++GA + +I  E+   IG   +  N L+E L   G +PY IP G S +  G  G++    E I Q+++    G+KFD IVV C +G T AG+  G
Sbjct:   27 HLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVI--EDGFDIGMRKSFANALQE-LEDAGHKPYPIPAGCSEHKYGGLGFVGFADEVINQEVEL---GIKFDKIVVCCVTGSTTAGILAG 212          
The following BLAST results are available for this feature:
BLAST of EY735921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
1A1D_VARPS6.911e-1934.211-aminocyclopropane-1-carboxylate deaminase OS=Var... [more]
1A1D_PSESM1.179e-1833.691-aminocyclopropane-1-carboxylate deaminase OS=Pse... [more]
1A1D_PSE141.540e-1834.221-aminocyclopropane-1-carboxylate deaminase OS=Pse... [more]
1A1D_ACIAC1.540e-1833.691-aminocyclopropane-1-carboxylate deaminase OS=Aci... [more]
1A1D_PSEU22.011e-1834.221-aminocyclopropane-1-carboxylate deaminase OS=Pse... [more]
1A1D_CRYNE2.011e-1833.33Probable 1-aminocyclopropane-1-carboxylate deamina... [more]
1A1D_VARPD4.479e-1832.631-aminocyclopropane-1-carboxylate deaminase OS=Var... [more]
1A1D_WILSA2.223e-1734.901-aminocyclopropane-1-carboxylate deaminase OS=Wil... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735921 ID=EY735921; Name=EY735921; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGCTCCCTAATTTGCCCCATAATACTGAGGTCTGGCTCAAG
CGTGATGACCTTTCCGGCATGCAATTGAGTGGAAACAAGGTAAGGAAATT
AGAGTTTTTGATGGCAGATGCAGTGGCTCAAGGTGCTGATTGCATCATCA
CCATTGGAGGCATCCAAAGCAATCATTGTCGTGCTGCTGCCGTTGCTGCC
AAGTATCTCAATCTTGATTGTTATCTTATTCTTCGTACCTCTAAGGTTCT
GGTGGACCAAGATCCTGGTTTGATCGGCAATCTACTAGTTGAACGTTTAG
TTGGAGCTCATATTGAACTTATCTCTAAAGAAGAGTATTCAAAAATTGGG
AGTGTGACTCTTACTAACATTTTAAAAGAAAAGTTGCTAAAGGAAGGGAG
AAGACCATATGTTATTCCTGTTGGTGGATCAAACTCAATAGGGACATGGG
GTTATATTGAAGCAATTAAGGAGATTGAGCAGCAACTTCAGACTGGGACT
GGTGGAGTGAAATTTGATGATATTGTTGTAGCTTGTGGCAGTGGAGGAAC
AATTGCTGGTTTGTCATTGGGGTCATGGCTTGGAACATTGAAAGCAAAAG
TCATGCTTTTTCTGTTTGTGATGACCCCGATTACTTCTTCGACTATACCC
AAGGCCTACTTGATGGGCTCAATGCAGGAGTTGACTCCCGTGCAATTGTT
AACATTCAACATGCGAAGGGTGCTAGGTATGGAAGTAGACCTTTGGAGGG
ACCTATTTTTGTCAGAAATTTCGTCCAGCGAAGGGTGGGGAGTCTGATAC
ACAGTAGGCGCGAGAAGGGGGGGCGGGGAGGGTGTGTTAGTGGTGCCTAA
GTTGGAGAANTN
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