EY735911

Overview
NameEY735911
Unique NameEY735911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SHIBS (Multidrug resistance protein mdtB OS=Shigella boydii serotype 4 (strain Sb227) GN=mdtB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ERWCT (Multidrug resistance protein mdtB OS=Erwinia carotovora subsp. atroseptica GN=mdtB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 72/109 (66.06%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN  QA+++N+QRQPGANVI   D I  +LP++  +LP  ++V  LTDRT +IRASVKDVQ ELL+AIALVVMV +LFLR   AT+IPSIAVPLSLVGTF
Sbjct:  275 AENIYLGAWANRQQAIIINVQRQPGANVITTTDSINKMLPALKASLPNSVEVATLTDRTTSIRASVKDVQFELLLAIALVVMVIYLFLRNAVATLIPSIAVPLSLVGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOUT (Multidrug resistance protein mdtB OS=Escherichia coli (strain UTI89 / UPEC) GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOSM (Multidrug resistance protein mdtB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOSE (Multidrug resistance protein mdtB OS=Escherichia coli (strain SE11) GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOLI (Multidrug resistance protein mdtB OS=Escherichia coli (strain K12) GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOLC (Multidrug resistance protein mdtB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOL6 (Multidrug resistance protein mdtB OS=Escherichia coli O6 GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOL5 (Multidrug resistance protein mdtB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOK1 (Multidrug resistance protein mdtB OS=Escherichia coli O1:K1 / APEC GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
The following BLAST results are available for this feature:
BLAST of EY735911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MDTB_SHIBS1.407e-3361.47Multidrug resistance protein mdtB OS=Shigella boyd... [more]
MDTB_ERWCT1.407e-3366.06Multidrug resistance protein mdtB OS=Erwinia carot... [more]
MDTB_ECOUT1.407e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_ECOSM1.407e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_ECOSE1.407e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_ECOLI1.407e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_ECOLC1.407e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_ECOL61.407e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_ECOL51.407e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_ECOK11.407e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-F05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735911 ID=EY735911; Name=EY735911; organism=Citrus sinensis; type=EST; length=333bp
GAGCCGAGAACGAACGCCTCGCGGCCTGGGCCAATGAAAACCAGGCGGTC
TTGCTGAACATTCAGCGCCAGCCCGGGGCCAACGTCATCGAAGTGGTGGA
CCGGATCAAGGCATTGTTGCCGAGCATCACCGACAACCTGCCGGCCGGCC
TGGACGTGACGGTGCTCACTGACCGGACCCAGACCATCCGGGCCTCGGTC
AAGGACGTACAACACGAATTGCTGATCGCCATTGCCCTGGTGGTGATGGT
GACGTTCCTGTTCCTGCGCCGCTTCAGCGCGACCATCATCCCGTCCATTG
CCGTGCCACTGTCCCTGGTGGGCACCTTTGGCG
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