EY735911

Overview
NameEY735911
Unique NameEY735911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SALG2 (Multidrug resistance protein mdtB OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=mdtB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.094e-33
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV+D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANQAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SALEP (Multidrug resistance protein mdtB OS=Salmonella enteritidis PT4 (strain P125109) GN=mdtB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.094e-33
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV+D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANQAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SALDC (Multidrug resistance protein mdtB OS=Salmonella dublin (strain CT_02021853) GN=mdtB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.094e-33
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV+D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANQAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SALCH (Multidrug resistance protein mdtB OS=Salmonella choleraesuis GN=mdtB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.094e-33
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV+D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANQAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SALA4 (Multidrug resistance protein mdtB OS=Salmonella agona (strain SL483) GN=mdtB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.094e-33
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV+D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANQAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECO5E (Multidrug resistance protein mdtB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=mdtB PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.094e-33
Identity = 66/109 (60.55%), Postives = 85/109 (77.98%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AI LVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAITLVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SALAR (Multidrug resistance protein mdtB OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=mdtB PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.347e-33
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV+D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ENT38 (Multidrug resistance protein mdtB OS=Enterobacter sp. (strain 638) GN=mdtB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.984e-33
Identity = 65/109 (59.63%), Postives = 88/109 (80.73%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I+  D I+A+LP + ++LP  ++V VL+DRT  IRASV D Q EL++A+ALVVM+ ++FLR   ATIIP++AVPLSLVGTF
Sbjct:  275 AENRWLGAWANKEQAIVMNVQRQPGANIIDTADSIRAMLPQLIESLPKSVNVKVLSDRTTNIRASVSDTQFELMLAMALVVMIIYVFLRNVPATIIPAVAVPLSLVGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SALPC (Multidrug resistance protein mdtB OS=Salmonella paratyphi C (strain RKS4594) GN=mdtB PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.191e-32
Identity = 65/109 (59.63%), Postives = 85/109 (77.98%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IR SV+D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANQAPAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRTSVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SALSV (Multidrug resistance protein mdtB OS=Salmonella schwarzengrund (strain CVM19633) GN=mdtB PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.032e-32
Identity = 66/109 (60.55%), Postives = 85/109 (77.98%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A ++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV+D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANQAPANVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVRDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
The following BLAST results are available for this feature:
BLAST of EY735911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MDTB_SALG24.094e-3360.55Multidrug resistance protein mdtB OS=Salmonella ga... [more]
MDTB_SALEP4.094e-3360.55Multidrug resistance protein mdtB OS=Salmonella en... [more]
MDTB_SALDC4.094e-3360.55Multidrug resistance protein mdtB OS=Salmonella du... [more]
MDTB_SALCH4.094e-3360.55Multidrug resistance protein mdtB OS=Salmonella ch... [more]
MDTB_SALA44.094e-3360.55Multidrug resistance protein mdtB OS=Salmonella ag... [more]
MDTB_ECO5E4.094e-3360.55Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_SALAR5.347e-3360.55Multidrug resistance protein mdtB OS=Salmonella ar... [more]
MDTB_ENT386.984e-3359.63Multidrug resistance protein mdtB OS=Enterobacter ... [more]
MDTB_SALPC1.191e-3259.63Multidrug resistance protein mdtB OS=Salmonella pa... [more]
MDTB_SALSV2.032e-3260.55Multidrug resistance protein mdtB OS=Salmonella sc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-F05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735911 ID=EY735911; Name=EY735911; organism=Citrus sinensis; type=EST; length=333bp
GAGCCGAGAACGAACGCCTCGCGGCCTGGGCCAATGAAAACCAGGCGGTC
TTGCTGAACATTCAGCGCCAGCCCGGGGCCAACGTCATCGAAGTGGTGGA
CCGGATCAAGGCATTGTTGCCGAGCATCACCGACAACCTGCCGGCCGGCC
TGGACGTGACGGTGCTCACTGACCGGACCCAGACCATCCGGGCCTCGGTC
AAGGACGTACAACACGAATTGCTGATCGCCATTGCCCTGGTGGTGATGGT
GACGTTCCTGTTCCTGCGCCGCTTCAGCGCGACCATCATCCCGTCCATTG
CCGTGCCACTGTCCCTGGTGGGCACCTTTGGCG
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