EY735911

Overview
NameEY735911
Unique NameEY735911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_ECOLU (Multidrug resistance protein mdtC OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_ECO5E (Multidrug resistance protein mdtC OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_ECO57 (Multidrug resistance protein mdtC OS=Escherichia coli O157:H7 GN=mdtC PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_ECO55 (Multidrug resistance protein mdtC OS=Escherichia coli (strain 55989 / EAEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_ECO24 (Multidrug resistance protein mdtC OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_YERPY (Multidrug resistance protein mdtC OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mdtC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  +    AVLL I R+PGAN+I  VDRI+A LP++  ++PA + + +  DR+ TIRAS+ +V+  L+IA+ALV++V F+FLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSAGQPAVLLVISREPGANIIATVDRIRAELPALRASIPASIQLNIAQDRSPTIRASLDEVERSLVIAVALVILVVFIFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_YERPS (Multidrug resistance protein mdtC OS=Yersinia pseudotuberculosis GN=mdtC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  +    AVLL I R+PGAN+I  VDRI+A LP++  ++PA + + +  DR+ TIRAS+ +V+  L+IA+ALV++V F+FLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSAGQPAVLLVISREPGANIIATVDRIRAELPALRASIPASIQLNIAQDRSPTIRASLDEVERSLVIAVALVILVVFIFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_YERPN (Multidrug resistance protein mdtC OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mdtC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  +    AVLL I R+PGAN+I  VDRI+A LP++  ++PA + + +  DR+ TIRAS+ +V+  L+IA+ALV++V F+FLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSAGQPAVLLVISREPGANIIATVDRIRAELPALRASIPASIQLNIAQDRSPTIRASLDEVERSLVIAVALVILVVFIFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_YERPG (Multidrug resistance protein mdtC OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdtC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  +    AVLL I R+PGAN+I  VDRI+A LP++  ++PA + + +  DR+ TIRAS+ +V+  L+IA+ALV++V F+FLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSAGQPAVLLVISREPGANIIATVDRIRAELPALRASIPASIQLNIAQDRSPTIRASLDEVERSLVIAVALVILVVFIFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_YERPE (Multidrug resistance protein mdtC OS=Yersinia pestis GN=mdtC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  +    AVLL I R+PGAN+I  VDRI+A LP++  ++PA + + +  DR+ TIRAS+ +V+  L+IA+ALV++V F+FLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSAGQPAVLLVISREPGANIIATVDRIRAELPALRASIPASIQLNIAQDRSPTIRASLDEVERSLVIAVALVILVVFIFLRSGRATLIPAVAVPVSLIGTF 374
The following BLAST results are available for this feature:
BLAST of EY735911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MDTC_ECOLU3.474e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECO5E3.474e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECO573.474e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECO553.474e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECO243.474e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_YERPY5.926e-2449.07Multidrug resistance protein mdtC OS=Yersinia pseu... [more]
MDTC_YERPS5.926e-2449.07Multidrug resistance protein mdtC OS=Yersinia pseu... [more]
MDTC_YERPN5.926e-2449.07Multidrug resistance protein mdtC OS=Yersinia pest... [more]
MDTC_YERPG5.926e-2449.07Multidrug resistance protein mdtC OS=Yersinia pest... [more]
MDTC_YERPE5.926e-2449.07Multidrug resistance protein mdtC OS=Yersinia pest... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-F05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735911 ID=EY735911; Name=EY735911; organism=Citrus sinensis; type=EST; length=333bp
GAGCCGAGAACGAACGCCTCGCGGCCTGGGCCAATGAAAACCAGGCGGTC
TTGCTGAACATTCAGCGCCAGCCCGGGGCCAACGTCATCGAAGTGGTGGA
CCGGATCAAGGCATTGTTGCCGAGCATCACCGACAACCTGCCGGCCGGCC
TGGACGTGACGGTGCTCACTGACCGGACCCAGACCATCCGGGCCTCGGTC
AAGGACGTACAACACGAATTGCTGATCGCCATTGCCCTGGTGGTGATGGT
GACGTTCCTGTTCCTGCGCCGCTTCAGCGCGACCATCATCCCGTCCATTG
CCGTGCCACTGTCCCTGGTGGGCACCTTTGGCG
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