EY735911

Overview
NameEY735911
Unique NameEY735911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_ECOSE (Multidrug resistance protein mdtC OS=Escherichia coli (strain SE11) GN=mdtC PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.011e-23
Identity = 51/108 (47.22%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++ VP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVVVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_ECO8A (Multidrug resistance protein mdtC OS=Escherichia coli O8 (strain IAI1) GN=mdtC PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.011e-23
Identity = 51/108 (47.22%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++ VP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVVVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_KLEP7 (Multidrug resistance protein mdtC OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mdtC PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.320e-23
Identity = 51/108 (47.22%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQQTIPAAIDLQIAQDRSPTIRASLEEVEQTLVISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_KLEP3 (Multidrug resistance protein mdtC OS=Klebsiella pneumoniae (strain 342) GN=mdtC PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.320e-23
Identity = 51/108 (47.22%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQQTIPAAIDLQIAQDRSPTIRASLEEVEQTLVISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_ENT38 (Multidrug resistance protein mdtC OS=Enterobacter sp. (strain 638) GN=mdtC PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.252e-23
Identity = 51/108 (47.22%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ V+ I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I+IALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVNSIRARLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLVISIALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_SALPC (Multidrug resistance protein mdtC OS=Salmonella paratyphi C (strain RKS4594) GN=mdtC PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.841e-23
Identity = 52/108 (48.15%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV+MV FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVIMVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_SALCH (Multidrug resistance protein mdtC OS=Salmonella choleraesuis GN=mdtC PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.841e-23
Identity = 52/108 (48.15%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV+MV FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVIMVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_SALSV (Multidrug resistance protein mdtC OS=Salmonella schwarzengrund (strain CVM19633) GN=mdtC PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.016e-23
Identity = 51/108 (47.22%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLVISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_SALTY (Multidrug resistance protein mdtC OS=Salmonella typhimurium GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTC_SALTI (Multidrug resistance protein mdtC OS=Salmonella typhi GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
The following BLAST results are available for this feature:
BLAST of EY735911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MDTC_ECOSE1.011e-2347.22Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECO8A1.011e-2347.22Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_KLEP71.320e-2347.22Multidrug resistance protein mdtC OS=Klebsiella pn... [more]
MDTC_KLEP31.320e-2347.22Multidrug resistance protein mdtC OS=Klebsiella pn... [more]
MDTC_ENT382.252e-2347.22Multidrug resistance protein mdtC OS=Enterobacter ... [more]
MDTC_SALPC3.841e-2348.15Multidrug resistance protein mdtC OS=Salmonella pa... [more]
MDTC_SALCH3.841e-2348.15Multidrug resistance protein mdtC OS=Salmonella ch... [more]
MDTC_SALSV5.016e-2347.22Multidrug resistance protein mdtC OS=Salmonella sc... [more]
MDTC_SALTY8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella ty... [more]
MDTC_SALTI8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella ty... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-F05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735911 ID=EY735911; Name=EY735911; organism=Citrus sinensis; type=EST; length=333bp
GAGCCGAGAACGAACGCCTCGCGGCCTGGGCCAATGAAAACCAGGCGGTC
TTGCTGAACATTCAGCGCCAGCCCGGGGCCAACGTCATCGAAGTGGTGGA
CCGGATCAAGGCATTGTTGCCGAGCATCACCGACAACCTGCCGGCCGGCC
TGGACGTGACGGTGCTCACTGACCGGACCCAGACCATCCGGGCCTCGGTC
AAGGACGTACAACACGAATTGCTGATCGCCATTGCCCTGGTGGTGATGGT
GACGTTCCTGTTCCTGCGCCGCTTCAGCGCGACCATCATCCCGTCCATTG
CCGTGCCACTGTCCCTGGTGGGCACCTTTGGCG
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