EY735893

Overview
NameEY735893
Unique NameEY735893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: ZG32_XENLA (Gastrula zinc finger protein XlCGF32.1 (Fragment) OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 256
            CGK F   SKLK HFL HTGE+ +VC H  CGK F  ++ L  H++ H+ EN  +C  PDCGK Y  + KL  H+  H
Sbjct:   11 CGKSFKRKSKLKTHFLCHTGEKPFVCVH--CGKGFRDNYKLSLHLRIHTGENLSVC--PDCGKSYTDKNKLIVHMRIH 84          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: GLI3_XENLA (Zinc finger protein GLI3 OS=Xenopus laevis GN=gli3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14
Identity = 41/106 (38.68%), Postives = 53/106 (50.00%), Query Frame = 2
Query:   20 GCGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHM-KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPP 334
            GC K +     LK H   HTGE+ YVC HEGC KAFS   +   H  +THS E  ++C  P C KRY     L+ H+ + H   A      + T  +R    P+PP
Sbjct:  557 GCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEA------HVTKKQRGDIHPRPP 656          

HSP 2 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 53/215 (24.65%), Postives = 82/215 (38.14%), Query Frame = 2
Query:   29 KKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH--PGHMSXXXXXXXXXXXXXXMDEGS-DQDAYAGKRVNG-------KSQKQSRAKPNLKMPPAKVTQRKSSTPSP 643
            K F     L  H   HTGE+ + C  EGC KA+S   NL++H+++H+ E  ++C +  C K +++      H    H                                S+E+PY C   GC K Y     L+ H+K  H    H++               + GS  Q    G++  G        S   S+ +  L++   K  +  SS PSP
Sbjct:  530 KPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTH--------------------------------SNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDIHPRPPPPREPGSHSQSRSPGQQTQGIHGEHKDLSNTTSKHEECLQVRSVKTEKPMSSQPSP 712          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: ZN121_HUMAN (Zinc finger protein 121 OS=Homo sapiens GN=ZNF121 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 52/141 (36.88%), Postives = 70/141 (49.65%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV--EVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 439
            CGK F  SS LK HF IHTG + Y C  + CGKAF++  +L +H+K H+ E  + C   DCGK +A   +L  HI +H  +   +  E  +       + K  +   G       E+PY C    C KAY   Y L  HLK
Sbjct:  261 CGKSFRSSSCLKNHFRIHTGIKPYKC--KECGKAFTVSSSLHNHVKIHTGEKPYEC--KDCGKAFATSSQLIEHIRTHTGEKPYICKECGKTFRASSHLQKHVRIHTG-------EKPYIC--NECGKAYNRFYLLTKHLK 388          

HSP 2 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 2
Query:   17 RGCGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 256
            + CGK F  SS+L  H   HTGE+ Y+C  + CGK F    +L+ H++ H+ E  +IC   +CGK Y   Y L  H+ +H
Sbjct:  315 KDCGKAFATSSQLIEHIRTHTGEKPYIC--KECGKTFRASSHLQKHVRIHTGEKPYIC--NECGKAYNRFYLLTKHLKTH 390          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: ZN675_HUMAN (Zinc finger protein 675 OS=Homo sapiens GN=ZNF675 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.146e-14
Identity = 54/148 (36.49%), Postives = 71/148 (47.97%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH--HEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM 460
            CGK F  SSKL  H  IHTGE+ Y C  E CGKAF+   NL  H K H++E  + C   +CGK + H   L  H   H   +     E  +      ++T+  K   G       ++PY C  E C KA+I   KL  H K+ H G +
Sbjct:  345 CGKAFNRSSKLTEHKNIHTGEQPYKC--EECGKAFNRSSNLTEHRKIHTEEKPYKC--KECGKAFKHSSALTTHKRIHTGEKPYKCEECGKAFNRSSKLTEHKKLHTG-------KKPYKC--EECGKAFIQSSKLTEH-KKIHSGEI 478          

HSP 2 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 49/141 (34.75%), Postives = 64/141 (45.39%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH--HEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 439
            CGK F  SS L  H +IHTGE+ Y C  E CGKAF+   NL +H K H+ E  +IC   +CGK +     L  H   H   +     E  +      ++T+      G       E+PY C  E C KA+     L  H K
Sbjct:  261 CGKAFNQSSHLTTHKIIHTGEKPYKC--EECGKAFNQFSNLTTHKKIHTGEQPYIC--EECGKAFTQSSTLTTHKRIHTGEKPYKCEECGKAFNRSSKLTEHKNIHTG-------EQPYKC--EECGKAFNRSSNLTEHRK 388          

HSP 3 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 47/141 (33.33%), Postives = 64/141 (45.39%), Query Frame = 2
Query:   11 RTRGCGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLH 433
            + + CGK F  SS L  H  IHTGE+ Y C  E CGKAF+    L  H K H+ +  + C   +CGK +    KL     + H+K  + E+P       +  K            + E+PY C  E C KA+    KL  H
Sbjct:  397 KCKECGKAFKHSSALTTHKRIHTGEKPYKC--EECGKAFNRSSKLTEHKKLHTGKKPYKC--EECGKAFIQSSKL-----TEHKKIHSGEIPYKCEECGKAFKHSSSLTTHKRIHTGEKPYKC--EECGKAFSRSSKLTEH 526          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: ZFP27_MOUSE (Zinc finger protein 27 OS=Mus musculus GN=Zfp27 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.146e-14
Identity = 50/139 (35.97%), Postives = 69/139 (49.64%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA--AVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLH 433
            CGK F   S L RH  IHTGE+ Y C H  CGK FS + +LR H K H+ E  H C   DCGK +  +  L+ H   H  + A   +E  +       +    +   G       E+PYAC  +GC KA++ + +L +H
Sbjct:  238 CGKSFFQVSSLFRHRRIHTGEKLYDCSH--CGKGFSYNSDLRIHQKIHTGEKRHGC--VDCGKAFTQKSTLRMHQKIHTGERAYVCIECGQAFIQKTHLVAHRRIHTG-------EKPYAC--DGCGKAFLSKSQLLVH 363          

HSP 2 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 48/138 (34.78%), Postives = 65/138 (47.10%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSA-SSERPYACPYEGCEKAYIHEYKLKLH 433
            CGK F   S+L  H  IHTGE+ YVC    CGKAFS   NL  H KTH+ E  + C   +CGK     ++ K+ + +HH  +   +        +  TK  K    V+    + E+PY C    C KA+     L  H
Sbjct:  658 CGKSFTSKSQLLVHRPIHTGEKPYVCAE--CGKAFSGRSNLSKHQKTHTGEKPYAC--SECGK----SFRQKSELITHHRIHTGEKPYDCGDCGKSFTK--KSQLQVHQRIHTGEKPYRC--AECGKAFTDRSNLNKH 783          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: ZN426_RAT (Zinc finger protein 426 OS=Rattus norvegicus GN=Znf426 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV-----EVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 454
            CGK FL SS+L +H   HTGE+ +VC    CGKAF++  NL  H+K H++E    C    CGK + +   L NH+ +H+ K +       +   Y+T  +   +            + E+PY C  + C KA+ H    ++H +R H G
Sbjct:  366 CGKAFLTSSRLIQHIRTHTGEKPFVCVK--CGKAFAISSNLNGHLKMHAEEK--TCECKICGKAFGYLSCLNNHMRTHNAKKSYTCKECGKAFNYSTHLKIHMRI----------HTGEKPYEC--KQCGKAFSHSTSFQIH-ERTHTG 497          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: ZN426_MOUSE (Zinc finger protein 426 OS=Mus musculus GN=Znf426 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV-----EVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 454
            CGK FL SS+L +H   HTGE+ +VC    CGKAF++  NL  H+K H++E    C    CGK + +   L NH+ +H+ K +       +   Y+T  +   +            + E+PY C  + C KA+ H    ++H +R H G
Sbjct:  363 CGKAFLTSSRLIQHIRTHTGEKPFVCVK--CGKAFAISSNLNGHLKLHAEEK--TCECKICGKAFGYLSCLNNHMRTHNAKKSYTCKECGKAFNYSTHLKIHMRI----------HTGEKPYEC--KQCGKAFSHSTSFQIH-ERTHTG 494          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: TF3A_RAT (Transcription factor IIIA OS=Rattus norvegicus GN=Gtf3a PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 40/137 (29.20%), Postives = 62/137 (45.26%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLH 433
            C   +  + KL  H   HTGER +VC +EGCGKAF  D++L  H+  H+ E   +C    C ++++ +  LK HI   HE                               + ++ Y C +EGC+KA+    +L+ H
Sbjct:   45 CSASYNKAWKLDAHLCKHTGERPFVCDYEGCGKAFIRDYHLSRHILIHTGEKPFVCADNGCNQKFSTKSNLKKHIERKHE-------------------------------NPQKQYVCNFEGCKKAFKKHQQLRTH 150          

HSP 2 Score: 73.559 bits (179), Expect = 1.726e-12
Identity = 42/149 (28.19%), Postives = 64/149 (42.95%), Query Frame = 2
Query:   20 GCGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHM--KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM 460
            GCGK F+    L RH LIHTGE+ +VC   GC + FS   NL+ H+  K  + +  ++C +  C K +    +L+ H   H                                 ++E  + C +EGC K +    +LK H K  H G++
Sbjct:   74 GCGKAFIRDYHLSRHILIHTGEKPFVCADNGCNQKFSTKSNLKKHIERKHENPQKQYVCNFEGCKKAFKKHQQLRTHQCQH---------------------------------TNEPLFRCTHEGCGKHFASPSRLKRHGK-VHEGYL 188          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: GLI2_HUMAN (Zinc finger protein GLI2 OS=Homo sapiens GN=GLI2 PE=1 SV=4)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 38/87 (43.68%), Postives = 47/87 (54.02%), Query Frame = 2
Query:   20 GCGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHM-KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV 277
            GC K +     LK H   HTGE+ YVC HEGC KAFS   +   H  +THS E  +IC  P C KRY     L+ H+ + H  +A V
Sbjct:  509 GCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHV 595          
BLAST of EY735893 vs. ExPASy Swiss-Prot
Match: ZN410_BOVIN (Zinc finger protein 410 OS=Bos taurus GN=ZNF410 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.009e-14
Identity = 38/139 (27.34%), Postives = 62/139 (44.60%), Query Frame = 2
Query:   20 GCGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHL 436
            GC + F+  +  K H   H  +R ++CP  GCGK+F +   L+ HM+TH+ E   +CP  +CGK++     LKNH+  H                                 + E+P+ C  +GC +++     L+ HL
Sbjct:  225 GCDRTFVWPAHFKYHLKTHRNDRSFICPAAGCGKSFYVLQRLKVHMRTHNGEKPFVCPESNCGKQFTTAGNLKNHLRIH---------------------------------TGEKPFLCEAQGCGRSFAEYSSLRKHL 330          

HSP 2 Score: 74.7146 bits (182), Expect = 7.749e-13
Identity = 38/143 (26.57%), Postives = 60/143 (41.96%), Query Frame = 2
Query:   20 GCGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH 448
            GCGK F    +LK H   H GE+ +VCP   CGK F+   NL++H++ H+ E   +C    CG+ +A    L+ H+  H                                 S E+P+ C  + C K +       +H+++ H
Sbjct:  255 GCGKSFYVLQRLKVHMRTHNGEKPFVCPESNCGKQFTTAGNLKNHLRIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVH---------------------------------SGEKPHQC--QVCGKTFSQSGSRNVHMRKHH 362          
The following BLAST results are available for this feature:
BLAST of EY735893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
ZG32_XENLA1.844e-1448.72Gastrula zinc finger protein XlCGF32.1 (Fragment) ... [more]
GLI3_XENLA1.844e-1438.68Zinc finger protein GLI3 OS=Xenopus laevis GN=gli3... [more]
ZN121_HUMAN2.409e-1436.88Zinc finger protein 121 OS=Homo sapiens GN=ZNF121 ... [more]
ZN675_HUMAN3.146e-1436.49Zinc finger protein 675 OS=Homo sapiens GN=ZNF675 ... [more]
ZFP27_MOUSE3.146e-1435.97Zinc finger protein 27 OS=Mus musculus GN=Zfp27 PE... [more]
ZN426_RAT4.109e-1432.89Zinc finger protein 426 OS=Rattus norvegicus GN=Zn... [more]
ZN426_MOUSE4.109e-1432.89Zinc finger protein 426 OS=Mus musculus GN=Znf426 ... [more]
TF3A_RAT4.109e-1429.20Transcription factor IIIA OS=Rattus norvegicus GN=... [more]
GLI2_HUMAN5.366e-1443.68Zinc finger protein GLI2 OS=Homo sapiens GN=GLI2 P... [more]
ZN410_BOVIN7.009e-1427.34Zinc finger protein 410 OS=Bos taurus GN=ZNF410 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-D07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735893 ID=EY735893; Name=EY735893; organism=Citrus sinensis; type=EST; length=884bp
CACGCGTCCGCGGACGCGTGGGTGTGGAAAGAAATTTTTGGATAGTTCGA
AGTTGAAAAGACACTTTCTTATTCATACTGGAGAAAGAGATTATGTATGT
CCTCATGAAGGCTGTGGTAAGGCATTCTCTTTGGACTTCAACCTGAGATC
ACACATGAAAACACATTCACAAGAAAATTATCACATCTGCCCATACCCAG
ATTGTGGAAAGAGATATGCTCATGAGTACAAGTTAAAGAATCATATTGCA
TCTCACCACGAAAAGAATGCTGCAGTGGAGGTGCCCAGATACGCTACTCC
TCCCGAGAGGATAACAAAAACTCCCAAGCCACCTGCTGGGGTTTATGGTT
CTGCATCATCTGAACGTCCTTATGCATGTCCTTATGAAGGGTGTGAAAAG
GCATATATCCATGAATACAAGCTTAAACTCCATCTGAAGCGGGAGCATCC
CGGCCATATGTCTGATGAAAATGCCGAGAATGCCACAACAAATGCTGATA
ATGAGATGGATGAAGGCAGTGACCAAGATGCCTATGCTGGAAAACGTGTT
AATGGCAAAAGTCAAAAACAAAGCCGGGCGAAGCCAAACTTGAAGATGCC
TCCTGCAAAAGTAACGCAACGCAAAAGCTCAACTCCATCTCCTGCCACCT
TGAATGTAGTGAGAAAGNCAACATGGACTCCTANAGAAGAAGTTTACGAG
GAAGAAGATAGTGAAGAAACTGAGGAAGATCGTGACAATGTTGAGGATGG
ATTTANGTACCGGCAAAATAATGAAGATGATGATGAGGAGACTGAGTACG
AAACTGAGCCTATAAAATGTTCCTTCACCCTCTGGGTAGGGCACTTGTAT
GATCTAACCTTACACCAGGTCCCTGGCTCTTTAT
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