EY735845

Overview
NameEY735845
Unique NameEY735845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_PONAB (Cysteine protease ATG4A OS=Pongo abelii GN=ATG4A PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20
Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D S+R+  +YR+ F PIG +  +SD GWGCMLR  QM++AQAL+   LGR W    QK   +EY  IL  F D +   +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLA 159          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_MOUSE (Cysteine protease ATG4A OS=Mus musculus GN=Atg4a PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20
Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D S+R+  +YR+ F PIG +  +SD GWGCMLR  QM++AQAL+   LGR W    QK   +EY  IL  F D +   +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLA 159          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_HUMAN (Cysteine protease ATG4A OS=Homo sapiens GN=ATG4A PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20
Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D S+R+  +YR+ F PIG +  +SD GWGCMLR  QM++AQAL+   LGR W    QK   +EY  IL  F D +   +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLA 159          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_DANRE (Cysteine protease ATG4B OS=Danio rerio GN=atg4b PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19
Identity = 48/112 (42.86%), Postives = 66/112 (58.93%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D +SR+  +YRK F PIG +  TSD GWGCMLR  QM++ +AL+   LGR W+    +    EYV IL+ F D + S +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   45 DVTSRLWFTYRKNFQPIGGTGPTSDTGWGCMLRCGQMILGEALICRHLGRDWKWSPGQRQRPEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLA 156          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_XENLA (Cysteine protease ATG4B OS=Xenopus laevis GN=atg4b PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19
Identity = 50/112 (44.64%), Postives = 64/112 (57.14%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D +SR+  +YR+ F  IG +  TSD GWGCMLR  QM+ AQAL+   +GR WR   QKP   EY+ IL  F D + S +SIH + Q G   G   G W GP  + +    LA
Sbjct:   45 DITSRLWFTYRRNFQAIGGTGPTSDTGWGCMLRCGQMIFAQALICRHVGRDWRWDKQKP-KGEYLNILTAFLDKKDSYYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLRKLA 155          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_HUMAN (Cysteine protease ATG4B OS=Homo sapiens GN=ATG4B PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19
Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D +SR+  +YRK F  IG +  TSD GWGCMLR  QM+ AQAL+   LGR WR   +K     Y  +L+ F D + S +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLA 156          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_BOVIN (Cysteine protease ATG4B OS=Bos taurus GN=ATG4B PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19
Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D +SR+  +YRK F  IG +  TSD GWGCMLR  QM+ AQAL+   LGR WR   +K     Y  +L  F D + S +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLA 156          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_MOUSE (Cysteine protease ATG4B OS=Mus musculus GN=Atg4b PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18
Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D +SR+  +YR+ F  IG +  TSD GWGCMLR  QM+ AQAL+   LGR WR   +K     Y  +L+ F D + S +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   45 DVASRLWFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLA 156          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_CHICK (Cysteine protease ATG4B OS=Gallus gallus GN=ATG4B PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18
Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D +SR+  +YRK F  IG +  TSD GWGCMLR  QM+ AQAL+   LGR WR    K     Y  +L+ F D + S +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   44 DVTSRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLA 155          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_PHANO (Probable cysteine protease ATG4 OS=Phaeosphaeria nodorum GN=ATG4 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.436e-18
Identity = 64/171 (37.43%), Postives = 82/171 (47.95%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPIGDSK---------------------ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAY-GLAAGSWVGPYAMCRSWEALARCQRAETGL-------GCQSLPMAIYVVSRDEDG 533
            F  DF SR+ ++YR GF PI  S+                      TSD G+GCM+RS Q ++A AL   RLGR WR   +   D+++ EIL LF D   +PFSIH  ++ G A  G   G W GP A  R  + LA   R E GL       G       +  V+ DEDG
Sbjct:   96 FLDDFESRVWMTYRSGFSPIQKSQDPKATSAMSFRVRMQNLASPGFTSDAGFGCMIRSGQCILANALQILRLGRDWRWQ-ENHADKDHAEILSLFADDPQAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCIQDLANKHR-EAGLKVYVSGDGADVYEDKLKQVAVDEDG 264          
The following BLAST results are available for this feature:
BLAST of EY735845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
ATG4A_PONAB9.888e-2042.86Cysteine protease ATG4A OS=Pongo abelii GN=ATG4A P... [more]
ATG4A_MOUSE9.888e-2042.86Cysteine protease ATG4A OS=Mus musculus GN=Atg4a P... [more]
ATG4A_HUMAN9.888e-2042.86Cysteine protease ATG4A OS=Homo sapiens GN=ATG4A P... [more]
ATG4B_DANRE1.291e-1942.86Cysteine protease ATG4B OS=Danio rerio GN=atg4b PE... [more]
ATG4B_XENLA2.203e-1944.64Cysteine protease ATG4B OS=Xenopus laevis GN=atg4b... [more]
ATG4B_HUMAN4.908e-1942.86Cysteine protease ATG4B OS=Homo sapiens GN=ATG4B P... [more]
ATG4B_BOVIN6.409e-1942.86Cysteine protease ATG4B OS=Bos taurus GN=ATG4B PE=... [more]
ATG4B_MOUSE1.093e-1841.96Cysteine protease ATG4B OS=Mus musculus GN=Atg4b P... [more]
ATG4B_CHICK1.428e-1842.86Cysteine protease ATG4B OS=Gallus gallus GN=ATG4B ... [more]
ATG4_PHANO2.436e-1837.43Probable cysteine protease ATG4 OS=Phaeosphaeria n... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-G12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735845 ID=EY735845; Name=EY735845; organism=Citrus sinensis; type=EST; length=818bp
CACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGTCTTGGTGTGTGCCAT
AAAATTGCACAGGATGAGGCCTTGGGTGATGCAGCTGGTAACAATGGATT
AGCGGAATTCAATCAAGATTTTTCATCAAGAATTCTGATTTCATATCGTA
AAGGTTTTGATCCTATTGGTGATTCAAAGATTACAAGTGATGTAGGCTGG
GGTTGCATGCTTCGAAGTAGTCAGATGCTTGTTGCACAGGCATTGCTTTT
TCATCGATTGGGGAGACCTTGGAGAAAACCTTTGCAGAAGCCATTTGATC
GTGAATATGTTGAGATCTTGCACCTTTTTGGTGATTCTGAGACATCACCT
TTCTCCATTCACAATCTTCTTCAAGCTGGAAAGGCTTATGGCCTTGCAGC
TGGATCATGGGTTGGCCCATATGCCATGTGTCGCTCATGGGAAGCTCTAG
CTCGTTGTCAGAGAGCGGAAACTGGCCTTGGATGCCAGTCACTTCCAATG
GCTATTTATGTTGTTTCACGTGATGAAGATGGGGAGCGAGGTGGAGCTCC
AGTTGTGTGTATTGACGATGCATCCTAGACATTGTTCTGTGTTTTCAAAA
CGTCCAGCTGACTGGACACCAATTCTTCTGCTTGTTCCCTTGGTTCTCGG
ACTTGAGAAAGTAAATCCCAGGGTCGTTCCCACCCGTGGGGTGGACGTTC
ACCGTTCCCCAAAGCCTGGGCATCCGGGGGGGGGAACCCCCGCTCCCCCA
GCTCACTTTGGGGGGGGGCGGGAAAGAGCCGGGTATCGACGTTGAATGCC
ATGAGGTTAGGCGGGCTA
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