EY735845

Overview
NameEY735845
Unique NameEY735845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4D_MOUSE (Cysteine protease ATG4D OS=Mus musculus GN=Atg4d PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17
Identity = 48/138 (34.78%), Postives = 66/138 (47.83%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR----------------------------------KPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 419
            F +DF SR+ ++YR+ F P+    +TSD GWGCMLRS QM++AQ LL H L R WR                                    L+   DR +  I+  F D   +PF +H L++ G++ G  AG W GP
Sbjct:  112 FQRDFVSRLWLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWRWVEGTGLASSEMPGPASPSRCRGPGRRGPPRWTQGALEMEQDRWHRRIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGP 249          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4D_PIG (Cysteine protease ATG4D OS=Sus scrofa GN=ATG4D PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16
Identity = 47/134 (35.07%), Postives = 66/134 (49.25%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR--------KPLQKP----------------------FDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 419
            F +DF SR+ ++YR+ F P+    +TSD GWGCMLRS QM++AQ LL H L R W          P   P                       +R + +I+  F D   +PF +H L++ G++ G  AG W GP
Sbjct:  111 FQRDFVSRLWLTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWSQGVGLGPPESSPNRYRGPAHWMPPHWVQAAPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGP 244          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_PICPA (Probable cysteine protease ATG4 OS=Pichia pastoris GN=ATG4 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 53/138 (38.41%), Postives = 67/138 (48.55%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPIGDSK---------------------ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAG-KAYGLAAGSWVGPYAMCRSWEALAR 455
            F  D  S+I ++YR GF PI   K                      TSD GWGCM+R+SQ L+A ALLF  LGR W    + P + E+  I+  F D    PFSIHN +Q G K      G W GP A  R+ + L +
Sbjct:   65 FIDDVYSKIWLTYRAGFPPIARDKDSPTFTLGALLRGQFDFNEIGFTSDAGWGCMIRTSQSLLANALLFLHLGRDWVFKAKDPANVEHDRIISWFVDIPDEPFSIHNFVQQGIKCCDKKPGEWFGPSAASRAIKNLCK 202          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_CHAGB (Probable cysteine protease ATG4 OS=Chaetomium globosum GN=ATG4 PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16
Identity = 54/139 (38.85%), Postives = 70/139 (50.36%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPI----------------------GDSK-ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGK-AYGLAAGSWVGPYAMCRSWEALA 452
            F  DF SRI ++YR GF+PI                      GD    +SD GWGCM+RS Q L+A ALL  +LGR WR+      +R    I+ LF D   +P+S+ N ++ G  A G   G W GP A  R  +ALA
Sbjct:  113 FLDDFGSRIWMTYRTGFEPIPRSTDPKAASALSFTMRLKTSFGDQTGFSSDTGWGCMIRSGQSLLANALLISQLGRDWRRTTDPGAER---NIVALFADDARAPYSLQNFVKHGAIACGKHPGEWFGPSATARCIQALA 248          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_MAGGR (Cysteine protease ATG4 OS=Magnaporthe grisea GN=ATG4 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16
Identity = 54/139 (38.85%), Postives = 69/139 (49.64%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPIGDSK-----------------------ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKA-YGLAAGSWVGPYAMCRSWEALA 452
            F  DF SRI ++YR GF+PI  S                         T+D GWGCM+R+ Q L+A +LL  RLGR WR+      +R   ++L LF D   +P+SIHN +  G A  G   G W GP A  R   ALA
Sbjct:  151 FLNDFESRIWMTYRSGFEPIPRSTDPTASSRMSFAMRLKTMADQQAGFTTDSGWGCMIRTGQSLLANSLLTCRLGRSWRRGQAPDEER---KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCIHALA 286          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_ASPNC (Probable cysteine protease atg4 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg4 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16
Identity = 55/139 (39.57%), Postives = 73/139 (52.52%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPI----GDSK-------------------ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAG-KAYGLAAGSWVGPYAMCRSWEALA 452
            F  DF SRI ++YR  F PI    GD K                    TSD GWGCM+RS Q L+A AL    LGR WR+  +  F+ E  ++L LF D+ T+PFS+H  ++ G ++ G   G W GP A  +  EAL+
Sbjct:   78 FLLDFESRIWMTYRSNFPPIPRVEGDDKSASMTLGVRLRSQLVDTQGFTSDTGWGCMIRSGQSLLANALSMLVLGRDWRRGAR--FEEE-SQLLSLFADTPTAPFSVHRFVKHGAESCGKYPGEWFGPSATAKCIEALS 213          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_BOTFB (Probable cysteine protease atg4 OS=Botryotinia fuckeliana (strain B05.10) GN=atg4 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16
Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPIGDSK-----------------------ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAG-KAYGLAAGSWVGPYAMCRSWEALARCQ 461
            F  DF ++I ++YR  F  I  S+                        TSD GWGCM+RS Q L+A ALL  R+GR WR+ +    +R   +IL LF D   +P+SIH  ++ G  A G   G W GP A  R  +AL+  Q
Sbjct:  103 FLDDFEAKIWLTYRSNFPAIAKSQDPKALSAMSLSVRLRSQLVDQGGFTSDTGWGCMIRSGQSLLANALLTLRMGREWRRGVSSNEER---KILSLFADDPRAPYSIHKFVEHGASACGKHPGEWFGPSATARCIQALSNSQ 241          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_PICAN (Probable cysteine protease ATG4 OS=Pichia angusta GN=ATG4 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.633e-16
Identity = 57/149 (38.26%), Postives = 74/149 (49.66%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPI-----GDSKI-------------------TSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAG-KAYGLAAGSWVGPYAMCRSWEALARCQRAETGL 479
            F +D  SRI ++YR GF  I     G S +                   T+D GWGCM+R+SQ L+A +LL  RLGR WR   Q     ++ EI+  F D  T+PFSIHN ++ G    G   G W GP A  RS + L      +TGL
Sbjct:   74 FLRDVHSRIWLTYRSGFPLIKRAEDGPSPLSFGSLIRGTVDLATVTKGFTTDAGWGCMIRTSQSLLANSLLQLRLGRGWRYD-QTRECAKHAEIVSWFVDIPTAPFSIHNFVEQGANCAGKKPGEWFGPSAAARSIQVLCEANYDKTGL 221          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_SCLS1 (Probable cysteine protease atg4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg4 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16
Identity = 52/142 (36.62%), Postives = 68/142 (47.89%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPIGDSK-----------------------ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAG-KAYGLAAGSWVGPYAMCRSWEALARCQ 461
            F  DF ++I ++YR  F  I  S+                        TSD GWGCM+RS Q L+A ALL  R+GR WR+      +R   +IL LF D   +P+SIH  ++ G  A G   G W GP A  R  +AL   Q
Sbjct:  103 FLDDFEAKIWLTYRSNFPAIAKSQDPKALSAMSLSVRLRSQLVDQGGFTSDTGWGCMIRSGQSLLANALLTLRMGREWRRGSSSNEER---KILSLFADDPRAPYSIHKFVEHGASACGKHPGEWFGPSAAARCIQALTNSQ 241          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_CRYPA (Probable cysteine protease ATG4 OS=Cryphonectria parasitica GN=ATG4 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15
Identity = 51/138 (36.96%), Postives = 68/138 (49.28%), Query Frame = 3
Query:  108 FNQDFSSRILISYRKGFDPIGDSK----------------------ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGK-AYGLAAGSWVGPYAMCRSWEALA 452
            F  DF SR+ ++YR  F+PI  S                        +SD GWGCM+RS Q L+A  L+  +LGR WR+       R+  EIL  F D   +P+S+HN ++ G  A G   G W GP A  R  +ALA
Sbjct:  124 FLDDFESRVWMTYRSEFEPISKSNDPRASAALSFAMRLRTLADQGGFSSDTGWGCMIRSGQSLLANTLVICQLGRDWRRGKAA---RQEREILARFADDPRAPYSLHNFVRHGAVACGKFPGEWFGPSATARCIQALA 258          
The following BLAST results are available for this feature:
BLAST of EY735845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
ATG4D_MOUSE1.579e-1734.78Cysteine protease ATG4D OS=Mus musculus GN=Atg4d P... [more]
ATG4D_PIG1.023e-1635.07Cysteine protease ATG4D OS=Sus scrofa GN=ATG4D PE=... [more]
ATG4_PICPA1.336e-1638.41Probable cysteine protease ATG4 OS=Pichia pastoris... [more]
ATG4_CHAGB1.745e-1638.85Probable cysteine protease ATG4 OS=Chaetomium glob... [more]
ATG4_MAGGR2.280e-1638.85Cysteine protease ATG4 OS=Magnaporthe grisea GN=AT... [more]
ATG4_ASPNC2.280e-1639.57Probable cysteine protease atg4 OS=Aspergillus nig... [more]
ATG4_BOTFB2.977e-1636.62Probable cysteine protease atg4 OS=Botryotinia fuc... [more]
ATG4_PICAN6.633e-1638.26Probable cysteine protease ATG4 OS=Pichia angusta ... [more]
ATG4_SCLS18.663e-1636.62Probable cysteine protease atg4 OS=Sclerotinia scl... [more]
ATG4_CRYPA1.131e-1536.96Probable cysteine protease ATG4 OS=Cryphonectria p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-G12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735845 ID=EY735845; Name=EY735845; organism=Citrus sinensis; type=EST; length=818bp
CACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGTCTTGGTGTGTGCCAT
AAAATTGCACAGGATGAGGCCTTGGGTGATGCAGCTGGTAACAATGGATT
AGCGGAATTCAATCAAGATTTTTCATCAAGAATTCTGATTTCATATCGTA
AAGGTTTTGATCCTATTGGTGATTCAAAGATTACAAGTGATGTAGGCTGG
GGTTGCATGCTTCGAAGTAGTCAGATGCTTGTTGCACAGGCATTGCTTTT
TCATCGATTGGGGAGACCTTGGAGAAAACCTTTGCAGAAGCCATTTGATC
GTGAATATGTTGAGATCTTGCACCTTTTTGGTGATTCTGAGACATCACCT
TTCTCCATTCACAATCTTCTTCAAGCTGGAAAGGCTTATGGCCTTGCAGC
TGGATCATGGGTTGGCCCATATGCCATGTGTCGCTCATGGGAAGCTCTAG
CTCGTTGTCAGAGAGCGGAAACTGGCCTTGGATGCCAGTCACTTCCAATG
GCTATTTATGTTGTTTCACGTGATGAAGATGGGGAGCGAGGTGGAGCTCC
AGTTGTGTGTATTGACGATGCATCCTAGACATTGTTCTGTGTTTTCAAAA
CGTCCAGCTGACTGGACACCAATTCTTCTGCTTGTTCCCTTGGTTCTCGG
ACTTGAGAAAGTAAATCCCAGGGTCGTTCCCACCCGTGGGGTGGACGTTC
ACCGTTCCCCAAAGCCTGGGCATCCGGGGGGGGGAACCCCCGCTCCCCCA
GCTCACTTTGGGGGGGGGCGGGAAAGAGCCGGGTATCGACGTTGAATGCC
ATGAGGTTAGGCGGGCTA
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