EY735842

Overview
NameEY735842
Unique NameEY735842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.213e-20
Identity = 56/153 (36.60%), Postives = 88/153 (57.52%), Query Frame = 2
Query:  308 TALFFLEKDLHPGMKMNLHF-TQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHAT 757
            T +FF E+ +  G ++  +F   T++   FL R+ A S PF++  LP +   F V P + EA  M+ T++ CE P + GE K+CATSLE++++ + + LG + + A+ ST  + G  +Q Y + A V  +     V CH Q YPY V+ CH T
Sbjct:  187 TTVFFHEEAVRVGERLPFYFPAATTSALGFLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRA-VLPVEGAGFVACHDQAYPYTVYRCHTT 338          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-17
Identity = 54/148 (36.49%), Postives = 73/148 (49.32%), Query Frame = 2
Query:  317 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHA 754
            FF E  L  G  M +          TFL R   K+ PFSS  + EI+  F     S  A I+ + + ECE P   GE K C  S E MIDF+TS LG+ V   +TE   G+K +       G+      ++V CH+  YPY ++YCH+
Sbjct:  409 FFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHS 556          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.388e-16
Identity = 53/167 (31.74%), Postives = 80/167 (47.90%), Query Frame = 2
Query:  272 AANENQLHDDPNTALFFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTE--VKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQT 763
            AA    L   P    FF E+DL  G +M +      +    FL R  A   PF +  +  +F      PG+   +++ +T+ EC  P  +GE K CATS E ++DF+   LG +V A +TE     G  ++   +A         +SV CH+  +PY V+YCH+  T
Sbjct:  462 AARRPPLRWSPEPGKFFRERDLVAGNRMPMPDIADRTPPRAFLPRDIAAKIPFDAAAVSALFG---AAPGTAMRQVVSSTVAECARPPSRGETKRCATSAEDVVDFAVEMLGDNVVARATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPT 625          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.812e-16
Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 2
Query:  389 TFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHA 754
            +FL R      PFS+ K+ EI   F     S    I+ + ++ECE P    E K C  S E MIDF+TS LG+SV   +TE   G+K +       G+      KSV CH+  YPY ++YCH+
Sbjct:  432 SFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHS 554          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16
Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = 2
Query:  389 TFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHA 754
            +FL R      PFS+ KL EI   F     S    I+ + + ECE P   GE K C  S E MIDF+TS LG+SV   +TE   G+K +       G+      K+V CH+  YPY ++YCH+
Sbjct:  436 SFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHS 558          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.004e-15
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 2
Query:  317 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHA 754
            FF EK L  G  M +          +FL R  A   PFS+ K+ E+   F     S   +++ + + ECE     GE K C  S E MIDF+TS LG++V   +TE  KG+          G+      KSV CH+  YPY ++YCH+
Sbjct:  415 FFREKMLKSGTIMPMPDIKDKMPKRSFLPRVIASKLPFSTSKIAELKKIFHAGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRNVVVRTTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHS 562          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 2
Query:  317 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHA 754
            FF EK L  G  M +          +FL R  A   PFS+ K+ E+   F     S  A+++ + + ECE     GE K C  S E MIDF+TS LG++V   +TE   G+K         G+      KSV CH+  YP  ++YCH+
Sbjct:  417 FFREKMLKSGTIMPMPDIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHS 564          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 2
Query:  317 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHA 754
            FF EK L  G  M +          +FL R  A   PFS+ K+ E+   F     S  A+++ + + ECE     GE K C  S E MIDF+TS LG++V   +TE   G+K         G+      KSV CH+  YP  ++YCH+
Sbjct:  414 FFREKMLKSGTIMPMPDIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHS 561          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: BURPA_ORYSJ (BURP domain-containing protein 10 OS=Oryza sativa subsp. japonica GN=BURP10 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15
Identity = 59/154 (38.31%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  314 LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGS-VEAEIMQNTIKECEDPG-IKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKGTKM--QTYTIAAGVKQMAA--DKSVVCHKQNYPYAVFYCHA 754
            L FLE  L PG  +  + T  +  A FL R  A S P S+    +I   FS  P S V A+ +Q+ +  CE    IKGE++ CATS+ES+++F+ S LG + ++A S +V     M    Y + A V+ +A     +V CH   +P+AVFYCHA
Sbjct:  111 LHFLEDALKPGSIITPYITGIATRAPFLRRDIADSIPVSTKNFADILAMFS--PISLVMADGIQSALDTCEHHRPIKGEERACATSIESVVEFAMSVLGTRDLRAFSPDVPPEGIMPGNMYKVVA-VRTVAGLRGDTVTCHTMRFPFAVFYCHA 261          
BLAST of EY735842 vs. ExPASy Swiss-Prot
Match: BURP9_ORYSJ (BURP domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=BURP9 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.614e-15
Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = 2
Query:  263 YVYAANENQLHDDPNTA-LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPG-IKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV-KKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCH 751
            Y+++     +H       L+F E +L PG  +          + FL R  +K  PFS   + +I   FS    ++ A+ +  T++ CE  G + GE+  CATS+ES++D   S LG K V+A++     +G     Y +A+      +   + CH   YPY VF+CH
Sbjct:  273 YIHSHGHGHVHFPEGAKDLYFFEDNLAPGSVLITRILSARQSSIFLHRNNSKHIPFSMKNITDILTMFSPVSATM-ADGIAATLQACEHTGMVHGEKAKCATSIESLLDVVVSSLGTKLVRALTPGAPMEGVPSLRYIVASATPVPNSQSMLACHDMLYPYKVFFCH 438          
The following BLAST results are available for this feature:
BLAST of EY735842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
BURPD_ORYSJ1.213e-2036.60BURP domain-containing protein 13 OS=Oryza sativa ... [more]
Y639_ARATH1.255e-1736.49Probable polygalacturonase non-catalytic subunit A... [more]
BURPE_ORYSJ1.388e-1631.74BURP domain-containing protein 14 OS=Oryza sativa ... [more]
JP630_ARATH1.812e-1638.21Probable polygalacturonase non-catalytic subunit J... [more]
JP650_ARATH8.994e-1639.02Probable polygalacturonase non-catalytic subunit J... [more]
GP1_SOLLC2.004e-1535.14Polygalacturonase-1 non-catalytic subunit beta OS=... [more]
GP3_SOLLC4.464e-1535.14Polygalacturonase non-catalytic subunit AroGP3 OS=... [more]
GP2_SOLLC4.464e-1535.14Polygalacturonase non-catalytic subunit AroGP2 OS=... [more]
BURPA_ORYSJ4.464e-1538.31BURP domain-containing protein 10 OS=Oryza sativa ... [more]
BURP9_ORYSJ7.614e-1529.94BURP domain-containing protein 9 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-G07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735842 ID=EY735842; Name=EY735842; organism=Citrus sinensis; type=EST; length=836bp
CACGCGTCCGCGGACGCGTGGGCAGCCAGATGTGCTGGAAGACAAAAGCA
CCTCTGTCAACGTAGGGAAGGGTGGTGTCAATGTGGATGCAGGGAAAGGA
AAGCCCGGTGGTGGCACCCATGTGAATGTTGGGGGTAAGGGCGTTGGTGT
AAACACTGGAAAGCCTGACAAAAGAACCAGTGTTGGTGTTGGCAAAGGAG
GAGTATCCGTAAGTACAGGACACAAGGGAAAGCCAGTTTATGTTGGAGTA
AGCCCATTCAACTATGTATATGCTGCAAATGAGAACCAACTCCATGATGA
CCCGAATACAGCTCTTTTCTTCTTGGAAAAGGACTTGCATCCTGGCATGA
AGATGAACTTGCACTTCACTCAAACTTCAAATGGAGCAACTTTCTTATCT
CGCCAAGCTGCCAAATCAACTCCTTTCTCGTCTGACAAATTGCCTGAGAT
CTTTAACCAGTTTTCCGTGAAACCTGGATCAGTTGAAGCTGAAATAATGC
AGAACACAATCAAAGAGTGTGAAGACCCTGGCATTAAAGGAGAGCAGAAA
TATTGTGCAACTTCACTGGAGTCAATGATTGACTTCAGCACTTCTAAGCT
TGGAAAGAGTGTTCAGGCAATTTCTACGGAGGTAAAAAAAGGAACCAAGA
TGCAGACATATACAATCGCAGCTGGAGTGAAGCAGATGGCAGCTGACAAA
TCAGTAGTGTGCCATAAGCAGAACTATCCATATGCTGTATTCTACTGCCA
TGCAACACAAACACAAGGGCTTACATGGTTCCCTTGGAAGGTGCTGATGG
GACAAAAGCAAAGCAGCAACAGTCTGCCACACAGAT
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