EY735836

Overview
NameEY735836
Unique NameEY735836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 51/191 (26.70%), Postives = 95/191 (49.74%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            S  G+   + SADK +++W G+ DG ++   T+  H   +  V   + +   V+AS D T   +D+SSG CL  +      G         F+P   ++ +G+ +  V+IWDVK+   +     H   V+A+ F+ +G  + ++++DG+ ++WD    +  ++    D   P + V F  +G Y+  A+ D
Sbjct:   54 SPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLD 235          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 51/191 (26.70%), Postives = 95/191 (49.74%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            S  G+   + SADK +++W G+ DG ++   T+  H   +  V   + +   V+AS D T   +D+SSG CL  +      G         F+P   ++ +G+ +  V+IWDVK+   +     H   V+A+ F+ +G  + ++++DG+ ++WD    +  ++    D   P + V F  +G Y+  A+ D
Sbjct:   54 SPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLD 235          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 51/191 (26.70%), Postives = 95/191 (49.74%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            S  G+   + SADK +++W G+ DG ++   T+  H   +  V   + +   V+AS D T   +D+SSG CL  +      G         F+P   ++ +G+ +  V+IWDVK+   +     H   V+A+ F+ +G  + ++++DG+ ++WD    +  ++    D   P + V F  +G Y+  A+ D
Sbjct:   54 SPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLD 235          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP4_PONAB (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 2
Query:   38 SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRK 475
            +AD +V++W    D   +    ++ HT  V  V  H + ++  T   D +W  +DL +     Q      +G   G    AFH DG + GTG  +A  ++WD+++   +   +GH+  +  I+FS NGY++AT + D   K+WDLR+
Sbjct:  299 AADGSVKLWSLDSD---EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQ 437          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 2
Query:   38 SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRK 475
            +AD +V++W    D   +    ++ HT  V  V  H + ++  T   D +W  +DL +     Q      +G   G    AFH DG + GTG  +A  ++WD+++   +   +GH+  +  I+FS NGY++AT + D   K+WDLR+
Sbjct:  299 AADGSVKLWSLDSD---EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQ 437          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP4_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 2
Query:   38 SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRK 475
            +AD +V++W    D   +    ++ HT  V  V  H + ++  T   D +W  +DL +     Q      +G   G    AFH DG + GTG  +A  ++WD+++   +   +GH+  +  I+FS NGY++AT + D   K+WDLR+
Sbjct:  300 AADGSVKLWSLDSD---EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA-----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQ 438          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PF20_CHLRE (Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 56/196 (28.57%), Postives = 85/196 (43.37%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVAT 601
            G    +G  D  V++W   +     C  T  DH   + +V  H   +   + SLD+T   +DL +G C   +      G  +     A+ P    L T +S+  V +WD ++      + GH  +   +SF+  G  LA+   DG VKLWD R      +  +   + P N   FD SG  LAVA  D +V   +T
Sbjct:  380 GTCLASGGGDSAVKIWDFEKQR---CVTTFTDHKQAIWSVRFHHLGEVVASGSLDHTVRLWDLPAGKCRMALR-----GHVDSVNDLAWQPFSSSLATASSDKTVSVWDARAGLCTQTYYGHQNSCNGVSFNILGTQLASTDADGVVKLWDTRMTAEVATINT--GKHPANKSCFDRSGQVLAVACDDGKVKAYST 565          

HSP 2 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 50/161 (31.06%), Postives = 72/161 (44.72%), Query Frame = 2
Query:  101 TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESS-DSETPTNSVDFDHSGSYLAVASAD 577
            T K H   V  + +H T    VTAS D TW  + +  G  +        +G  +      FHP G  L +G  ++ VKIWD + Q  V  F  H  A+ ++ F   G  +A+ + D  V+LWDL   K   +     DS    N + +    S LA AS+D
Sbjct:  321 TFKGHLLSVANLALHPTKPILVTASDDKTWKMWHMPGGDLIMC-----GEGHKDWVAGVDFHPAGTCLASGGGDSAVKIWDFEKQRCVTTFTDHKQAIWSVRFHHLGEVVASGSLDHTVRLWDLPAGKCRMALRGHVDS---VNDLAWQPFSSSLATASSD 473          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.718e-15
Identity = 52/191 (27.23%), Postives = 94/191 (49.21%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            S  G+   + +AD  + +W G+ DG   CK TL  H+ E+  V   + +   V+AS D T   +D+ SG CL  +      G  +      F+P   ++ +G+ +  VKIW+VK+   +     H   ++A+ F  NG  + + ++DG+ ++WD    +  R+  + +   P + V F  +G Y+  A+ D
Sbjct:   48 SPNGEWLASSAADALIIIW-GAYDGK--CKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLK-----GHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTL-ADEGNPPVSFVKFSPNGKYILTATLD 229          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.636e-15
Identity = 60/194 (30.93%), Postives = 91/194 (46.91%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            S  G L  +GS DKTVR+W  +  G        + HTA V++V   +  +  VTAS D T   W  +       LTQ               A F PDG ++ + + +  VK+WD  S+  +  +  H G VT + F  +G  +A A  D  VK+WD R  +  + ++   +    N++ F  SG+YL  AS+D
Sbjct:   70 SPSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQ--------HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSA--AVNALSFHPSGNYLITASSD 250          

HSP 2 Score: 76.2554 bits (186), Expect = 2.544e-13
Identity = 55/197 (27.92%), Postives = 88/197 (44.67%), Query Frame = 2
Query:    2 HASAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGY-TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 586
            H  ++G   +T S DKTV+VW            +L  H   V+        +  V+AS D T   +D +S  C+    + G      G+ T   FHP G  +     +  VK+WD ++   +  +  H  AV A+SF  +G YL TA+ D  +K+ DL  ++    +     + P  +V F  +G Y A   +D +V
Sbjct:  110 HFCSDGQSLVTASDDKTVKVWSTHRQRFL---FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHG------GFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL--MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.054e-15
Identity = 52/191 (27.23%), Postives = 94/191 (49.21%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            S  G+   + SAD+ + +W G+ DG Y+   TL  H  E+  V   + +   V+AS D T   +D+ SG CL  +      G         F+P   ++ +G+ +  VKIW+VK+   +     H   V+A+ F+ +G  + + ++DG+ ++WD    +  ++    D+  P + V F  +G Y+  A+ D
Sbjct:   50 SPNGEWLASSSADRLIIIW-GAYDGKYE--RTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLK-----GHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDN-PPVSFVKFSPNGKYILTATLD 231          
The following BLAST results are available for this feature:
BLAST of EY735836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
WDR5_MOUSE1.593e-1526.70WD repeat-containing protein 5 OS=Mus musculus GN=... [more]
WDR5_HUMAN1.593e-1526.70WD repeat-containing protein 5 OS=Homo sapiens GN=... [more]
WDR5_BOVIN1.593e-1526.70WD repeat-containing protein 5 OS=Bos taurus GN=WD... [more]
PRP4_PONAB1.593e-1530.61U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pong... [more]
PRP4_MOUSE1.593e-1530.61U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus ... [more]
PRP4_HUMAN1.593e-1530.61U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo... [more]
PF20_CHLRE2.081e-1528.57Flagellar WD repeat-containing protein Pf20 OS=Chl... [more]
WDR5B_RAT2.718e-1527.23WD repeat-containing protein 5B OS=Rattus norvegic... [more]
WD51A_MOUSE4.636e-1530.93WD repeat-containing protein 51A OS=Mus musculus G... [more]
WDR5B_PONAB6.054e-1527.23WD repeat-containing protein 5B OS=Pongo abelii PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735836 ID=EY735836; Name=EY735836; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCAGAAGGTGATCTATTCTTAACAGGCTCGGCTGATAAGA
CTGTTCGTGTGTGGCAAGGATCTGAAGATGGAAATTATGATTGTAAGCAC
ACTTTGAAGGATCATACTGCTGAGGTGCAAGCTGTCACGGTCCATGCCAC
GAACAAATACTTTGTGACTGCTTCTCTGGATAATACATGGTGCTTTTACG
ATCTTTCTTCTGGTATATGCCTGACACAGGTTTCAGATGCTGGAACCGAC
GGTAGACCTGAAGGTTATACATCTGCAGCTTTTCATCCTGATGGTCTCAT
CCTTGGAACGGGCACCTCAGAAGCTCTTGTTAAGATTTGGGATGTGAAAA
GTCAGGCAAATGTGGCGAAATTTGATGGACATGTTGGAGCAGTTACAGCC
ATATCCTTTTCAGAAAATGGTTACTACCTTGCGACGGCAGCCCATGATGG
TGTGAAGCTGTGGGACCTGCGTAAATTGAAGAACTTCCGGTCATTTGAAT
CTTCTGATTCTGAGACACCTACCAACTCAGTGGATTTCGACCATAGTGGA
TCTTACCTCGCAGTTGCAAGTGCAGATATAAGAGTCTACCAAGTGGCCAC
TGTTACAGCTGATTGGAATTGTATCAAAACTTTTCCTGATTTATCAGGCA
CAGGTAAGGCAACTTGTGTGAAATTTGGGCCCCCATCGCTACTACCTTGC
TGTGGGATCAATGGACCGCCACCTACTGGTATTTGGTCTGCCCTGGCAAG
TATGCCCCGTCAAAACCGAACACAATCCTACACCGCACCCCCTTGAGACG
TTGGGCCCCCGCCCCTTGCAGCCTCCCATCCTCTTCCCCCCCCCCTGCAA
CAAACCCGCC
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