EY735836

Overview
NameEY735836
Unique NameEY735836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 57/204 (27.94%), Postives = 89/204 (43.63%), Query Frame = 2
Query:   14 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVATVTADW 616
            E +L L+ S D T+R+W       + C  T + H   V  V       YFV+ S D T   +   S   L         G         FHP+   + TG+S+  V++WD  +  +V    GH G+V++++FS  G YLA+ + D  + +WDL       +     S   T  + F   G+ LA A  D  + ++    VT D+
Sbjct:  461 EMNLLLSCSEDSTIRLWSLL---TWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFV-----GHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTT--ITFSRDGTVLAAAGLDNNLTLWDFHKVTEDY 654          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP46_DEBHA (Pre-mRNA-splicing factor PRP46 OS=Debaryomyces hansenii GN=PRP46 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 40/151 (26.49%), Postives = 77/151 (50.99%), Query Frame = 2
Query:   26 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK 475
            F+TGS+D T+++W  +     + K T+  H   V+++ V +   Y  + S D T   +DL      +        G   G  + A HP+  +L TG  ++++++WD++S+  +    GH   +T+I+       + T++ D  ++LWD+RK
Sbjct:  137 FVTGSSDSTIKIWDLASS---NLKATITGHIMGVRSLAVSSRYPYLFSGSEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAMALHPELDLLFTGGRDSVIRVWDLRSRTEIMVLSGHRSDITSIASQIGDPQIITSSMDATIRLWDIRK 284          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 58/199 (29.15%), Postives = 90/199 (45.23%), Query Frame = 2
Query:   11 AEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 595
            A+    L+ S D ++R W   + G++      + H   V  V +   + YF + S D T   +       L   +     G         FHP+   L TG+++  V++W  +   +V  F GH G V ++SFS NG YLA+A  D  +KLWDL     F+     +DS T   S+ F      +A AS D  +RV+ +
Sbjct:  352 ADSSGLLSCSEDMSIRYW---DLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYA-----GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSIT---SLAFSPDSGLIASASMDNSVRVWDI 539          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 51/191 (26.70%), Postives = 81/191 (42.41%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKY---FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            G  F+TGS D+T +VW  +        HTL+ H   V A+  +  N Y     T S D T   +   +G C          G        AF+P   ++ TG+ +   K+WD++S        GH   + ++SF+  G  L T + D  V +W++   +   +      E   +S  F+   S +A AS D
Sbjct:  104 GSSFITGSYDRTCKVWDTASGEEL---HTLEGHRNVVYAIQFN--NPYGDKIATGSFDKTCKLWSAETGKCYHTFR-----GHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGE--ISSAQFNWDCSLIATASMD 282          

HSP 2 Score: 68.1662 bits (165), Expect = 6.927e-11
Identity = 57/225 (25.33%), Postives = 91/225 (40.44%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG---------------ICLTQVSDAGTDGR----------PEG------------YTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            GD   TGS DKT ++W  +E G   C HT + HTAE+  +  +  +    T S+D T   +D+ SG               +      D    G           P G             +SA F+ D  ++ T + +   K+WD  +   VA   GH   V  ++F   G  +ATA+ DG  +++     K     E  + E   + + F+  G+ +  AS+D
Sbjct:  147 GDKIATGSFDKTCKLWS-AETGK--CYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGE--ISKICFNAQGNRILTASSD 366          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR61_XENLA (WD repeat-containing protein 61 OS=Xenopus laevis GN=wdr61 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 58/195 (29.74%), Postives = 93/195 (47.69%), Query Frame = 2
Query:   20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 595
            +L ++GS D  V+VW+ S++   + +  L+ H   V +V V  +     ++SLD     +DL SG  +  + DAG    P    S AF PD   L TG+    V I+ V++       D     + +I++S +G YLA+ A DG + ++D+   K   + E      P  S+ F      L  AS D  I++Y V
Sbjct:   33 ELVISGSLDDLVKVWKWSDE-RLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSI-DAG----PVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--HAMPIRSLTFSTDSQLLVTASDDGYIKIYDV 219          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR61_CHICK (WD repeat-containing protein 61 OS=Gallus gallus GN=WDR61 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 57/192 (29.69%), Postives = 92/192 (47.92%), Query Frame = 2
Query:   29 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 595
            ++GS D  V+VW+ +++   D + TL+ H   V +V +  T     ++SLD     +DL +G  +  + DAG    P    S AF PD   L TG+    V I+ V++       D     + +I++S +G YLA+ A DG + ++D+   K   + E      P  S+ F      L  AS D  I++Y V
Sbjct:   36 ISGSLDDLVKVWKWNDE-KLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSI-DAG----PVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 52/191 (27.23%), Postives = 80/191 (41.88%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKY---FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVK-LWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            G  F+TGS D+T ++W  +        HTL+ H   V A+  +  N Y     T S D T   +   +G C          G        AF+P   ++ TG+ +   K+WDV+S   V+   GH   + ++ F+  G  L T + D    LWD+   +          E   + V F+   S +A AS D
Sbjct:  104 GSCFITGSYDRTCKIWDTASGEEL---HTLEGHRNVVYAIAFN--NPYGDKVATGSFDKTCKLWSAETGKCFYTFR-----GHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGE--ISCVQFNWDCSLIATASLD 282          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 47/191 (24.61%), Postives = 86/191 (45.03%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            +  G+  +TGS D TV VW+          +TL  H AE+ +   +      +T S+D T   +D  +G C+  ++     G  +    + F   G ++ T +++   +I+   ++  V K +GH G ++ ISF+  G  L T + D   ++WD +  +  +  E    E    S  F++ G  +   S D
Sbjct:  228 NTSGNRIITGSFDHTVTVWEADTGRKV---YTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLT-----GHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDE--IFSCAFNYKGDIIITGSKD 408          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROSI (WD repeat-containing protein 48 homolog OS=Drosophila simulans GN=GD25924 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.182e-12
Identity = 42/156 (26.92%), Postives = 77/156 (49.36%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++   + K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAQKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRIMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROSE (WD repeat-containing protein 48 homolog OS=Drosophila sechellia GN=GM20456 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.182e-12
Identity = 42/156 (26.92%), Postives = 77/156 (49.36%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++   + K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAQKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRIMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
The following BLAST results are available for this feature:
BLAST of EY735836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
TAF5_DROME2.812e-1227.94Transcription initiation factor TFIID subunit 5 OS... [more]
PRP46_DEBHA2.812e-1226.49Pre-mRNA-splicing factor PRP46 OS=Debaryomyces han... [more]
TAF5L_MOUSE3.673e-1229.15TAF5-like RNA polymerase II p300/CBP-associated fa... [more]
WDR69_XENTR4.797e-1226.70WD repeat-containing protein 69 OS=Xenopus tropica... [more]
WDR61_XENLA4.797e-1229.74WD repeat-containing protein 61 OS=Xenopus laevis ... [more]
WDR61_CHICK4.797e-1229.69WD repeat-containing protein 61 OS=Gallus gallus G... [more]
WDR69_DANRE6.265e-1227.23WD repeat-containing protein 69 OS=Danio rerio GN=... [more]
WDR69_BOVIN6.265e-1224.61WD repeat-containing protein 69 OS=Bos taurus GN=W... [more]
WDR48_DROSI8.182e-1226.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROSE8.182e-1226.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735836 ID=EY735836; Name=EY735836; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCAGAAGGTGATCTATTCTTAACAGGCTCGGCTGATAAGA
CTGTTCGTGTGTGGCAAGGATCTGAAGATGGAAATTATGATTGTAAGCAC
ACTTTGAAGGATCATACTGCTGAGGTGCAAGCTGTCACGGTCCATGCCAC
GAACAAATACTTTGTGACTGCTTCTCTGGATAATACATGGTGCTTTTACG
ATCTTTCTTCTGGTATATGCCTGACACAGGTTTCAGATGCTGGAACCGAC
GGTAGACCTGAAGGTTATACATCTGCAGCTTTTCATCCTGATGGTCTCAT
CCTTGGAACGGGCACCTCAGAAGCTCTTGTTAAGATTTGGGATGTGAAAA
GTCAGGCAAATGTGGCGAAATTTGATGGACATGTTGGAGCAGTTACAGCC
ATATCCTTTTCAGAAAATGGTTACTACCTTGCGACGGCAGCCCATGATGG
TGTGAAGCTGTGGGACCTGCGTAAATTGAAGAACTTCCGGTCATTTGAAT
CTTCTGATTCTGAGACACCTACCAACTCAGTGGATTTCGACCATAGTGGA
TCTTACCTCGCAGTTGCAAGTGCAGATATAAGAGTCTACCAAGTGGCCAC
TGTTACAGCTGATTGGAATTGTATCAAAACTTTTCCTGATTTATCAGGCA
CAGGTAAGGCAACTTGTGTGAAATTTGGGCCCCCATCGCTACTACCTTGC
TGTGGGATCAATGGACCGCCACCTACTGGTATTTGGTCTGCCCTGGCAAG
TATGCCCCGTCAAAACCGAACACAATCCTACACCGCACCCCCTTGAGACG
TTGGGCCCCCGCCCCTTGCAGCCTCCCATCCTCTTCCCCCCCCCCTGCAA
CAAACCCGCC
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