EY735836

Overview
NameEY735836
Unique NameEY735836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 55/193 (28.50%), Postives = 86/193 (44.56%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL--RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            S+  +L  + S D TV +W  +  G +  + T   HT  +  V      K F TA  D T   +DL   +  T        G  +   S +F PDG IL + + +  V++W  +S   +A   GH  +V    FS +G  L +   DG ++LWDL    ++ F        E     V++  +G+ LAVA+ D
Sbjct:  569 SSHKNLIASASRDGTVHLW--TPQGEFLREFT--GHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQT------LKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLDGNLIRQF-----GLPEVAFFGVNWHPNGNLLAVAADD 746          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 50/191 (26.18%), Postives = 80/191 (41.88%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKY---FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            G  F+TGS D+T +VW  +        HTL+ H   V A+  +  N Y     T S D T   +   +G C          G         F+P   ++ TG+ +   K+WD++S        GH   + ++SF+  G  L T + D  V +W++   +   +      E   +S  F+   S +A AS D
Sbjct:  104 GSSFITGSYDRTCKVWDTASGEEL---HTLEGHRNVVYAIQFN--NPYGDKIATGSFDKTCKLWSAETGKCYHTFR-----GHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGE--ISSAQFNWDCSLIATASMD 282          

HSP 2 Score: 68.1662 bits (165), Expect = 6.927e-11
Identity = 57/225 (25.33%), Postives = 91/225 (40.44%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG---------------ICLTQVSDAGTDGR----------PEG------------YTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            GD   TGS DKT ++W  +E G   C HT + HTAE+  +  +  +    T S+D T   +D+ SG               +      D    G           P G             +SA F+ D  ++ T + +   K+WD  +   VA   GH   V  ++F   G  +ATA+ DG  +++     K     E  + E   + + F+  G+ +  AS+D
Sbjct:  147 GDKIATGSFDKTCKLWS-AETGK--CYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGE--ISKICFNAQGNRIVTASSD 366          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 61/213 (28.64%), Postives = 85/213 (39.91%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVATVTADWNCIKTFPDL 643
            S + +  L+ S D TVR+W       + C    K H   V          YFV+   D     +       L   +     G         FHP+   + TG+++  V++WDV +   V  F GH G + +++FS NG +LAT A DG V LWD+         E         S+ F   G  LA  S D  V         W+ IK F DL
Sbjct:  552 SPDRNYLLSSSEDGTVRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFA-----GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG--HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL-------WDAIKAFEDL 747          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 47/164 (28.66%), Postives = 75/164 (45.73%), Query Frame = 2
Query:   26 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSE 514
            F +GS D+T R+W  S D  Y  +     H A+V  V  H  + Y  T S D T   +    G  +   +     G      S AF P+G  L +   +  +K+WD+ S     +  GH   +T+++FS +   +A+A+ D  V++WD+R        + S SE
Sbjct:  399 FASGSHDRTARLW--SFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT-----GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSE 554          

HSP 2 Score: 68.1662 bits (165), Expect = 6.927e-11
Identity = 52/198 (26.26%), Postives = 86/198 (43.43%), Query Frame = 2
Query:   11 AEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 595
            A+    L+ S D ++R W   + G++      + H   V  + +   + YF + S D T   +       L   +     G         FHP+   L TG+++  V++W  +   +V  F GH G V +++FS NG YLA+A  D  +KLWDL     ++            S+ F      +A AS D  +RV+ +
Sbjct:  352 ADSSGLLSCSEDMSIRYW---DLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYA-----GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSLTFSPDSGLIASASMDNSVRVWDI 539          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 52/203 (25.62%), Postives = 84/203 (41.38%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD---------------AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 577
            GD  L+ S D+T+++W   E     C  T   H   V+ V VH     F T S D T   +  +S  C  ++ D               A       G  +   H  G  L +G+ +  ++IWDV     +    GH   V  ++F   G YL +A+ D  +++WDLR  +  ++  +   +    S+DF  +  Y+   S D
Sbjct:  205 GDYVLSASRDRTIKMW---EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYA--HQHFCTSIDFHKAHPYVISGSVD 402          

HSP 2 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 45/174 (25.86%), Postives = 77/174 (44.25%), Query Frame = 2
Query:   14 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT--------------------VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE-NGYYLATAAHDGVKLWDLR 472
            EG +F T S D+T+RVW      + DCK  L+DH   V+ +                      H    +  + S D T   +D+S G+CL  +S     G        AFHP G  L + + +  +++WD++++  +     H    T+I F + + Y ++ +    VK+W+ R
Sbjct:  246 EGSIFATCSNDQTIRVWL---TNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLS-----GHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR61_DANRE (WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 57/195 (29.23%), Postives = 91/195 (46.67%), Query Frame = 2
Query:   20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 595
            +  +TGS D  V+VW+ S D   + + TL+ H   V +V +        ++SLD     +DL +G  +  + DAG    P    + AF PD   + TG+    V I+ V+S       D     + +I++S +G YLA+ A DG + ++D+   K   + E      P  S+ F      L  AS D  I++Y V
Sbjct:   33 ETIVTGSLDDLVKVWKWS-DEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSM-DAG----PVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PWP2_YEAST (Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae GN=PWP2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  251 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA---DIRVYQVAT 601
            G  +   S A+ PDG  + T + +  +K+WD+ S   +A F+ H  +VTA+ F++ G  + +++ DG V+ WDL + +NFR+F  ++     N +  D SG  +   S    DI V+ V T
Sbjct:  343 GHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTE-RIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQT 462          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: PRP46_SCHPO (Pre-mRNA-splicing factor prp46 OS=Schizosaccharomyces pombe GN=prp5 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 57/220 (25.91%), Postives = 95/220 (43.18%), Query Frame = 2
Query:   20 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFE------SSDSETPTNSVDFDHSGSYLAVASAD--IRVY-QVATVTADWNCIKTFPDLSGT 652
            D+ +T   D   RVW      N    H L  H + V ++ V   +   VT S+D+T   +DL++G  LT ++      R     + + HPD     +G+S+  +K W     A +  F+GH   V  +S + +    + A +  +  WD +    ++  +      S DSE    +  FD +G  L    AD  +++Y QV   T +     T P+L  T
Sbjct:  260 DVLVTAGRDAVARVWDMRTRQNV---HVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVR-----ALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMFSGADNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFDKTGLRLITCEADKSVKIYKQVDNATPE-----THPNLPWT 465          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROYA (WD repeat-containing protein 48 homolog OS=Drosophila yakuba GN=GE13034 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++     K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAQKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROPS (WD repeat-containing protein 48 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21511 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++     K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAQKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
The following BLAST results are available for this feature:
BLAST of EY735836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
Y143_SYNY31.396e-1128.50Uncharacterized WD repeat-containing protein slr01... [more]
WDR69_XENLA1.396e-1126.18WD repeat-containing protein 69 OS=Xenopus laevis ... [more]
TAF5_HUMAN1.396e-1128.64Transcription initiation factor TFIID subunit 5 OS... [more]
TAF5L_HUMAN1.823e-1128.66TAF5-like RNA polymerase II p300/CBP-associated fa... [more]
LIS1_DROME1.823e-1125.62Lissencephaly-1 homolog OS=Drosophila melanogaster... [more]
WDR61_DANRE2.381e-1129.23WD repeat-containing protein 61 OS=Danio rerio GN=... [more]
PWP2_YEAST2.381e-1132.23Periodic tryptophan protein 2 OS=Saccharomyces cer... [more]
PRP46_SCHPO2.381e-1125.91Pre-mRNA-splicing factor prp46 OS=Schizosaccharomy... [more]
WDR48_DROYA3.109e-1126.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROPS3.109e-1126.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735836 ID=EY735836; Name=EY735836; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCAGAAGGTGATCTATTCTTAACAGGCTCGGCTGATAAGA
CTGTTCGTGTGTGGCAAGGATCTGAAGATGGAAATTATGATTGTAAGCAC
ACTTTGAAGGATCATACTGCTGAGGTGCAAGCTGTCACGGTCCATGCCAC
GAACAAATACTTTGTGACTGCTTCTCTGGATAATACATGGTGCTTTTACG
ATCTTTCTTCTGGTATATGCCTGACACAGGTTTCAGATGCTGGAACCGAC
GGTAGACCTGAAGGTTATACATCTGCAGCTTTTCATCCTGATGGTCTCAT
CCTTGGAACGGGCACCTCAGAAGCTCTTGTTAAGATTTGGGATGTGAAAA
GTCAGGCAAATGTGGCGAAATTTGATGGACATGTTGGAGCAGTTACAGCC
ATATCCTTTTCAGAAAATGGTTACTACCTTGCGACGGCAGCCCATGATGG
TGTGAAGCTGTGGGACCTGCGTAAATTGAAGAACTTCCGGTCATTTGAAT
CTTCTGATTCTGAGACACCTACCAACTCAGTGGATTTCGACCATAGTGGA
TCTTACCTCGCAGTTGCAAGTGCAGATATAAGAGTCTACCAAGTGGCCAC
TGTTACAGCTGATTGGAATTGTATCAAAACTTTTCCTGATTTATCAGGCA
CAGGTAAGGCAACTTGTGTGAAATTTGGGCCCCCATCGCTACTACCTTGC
TGTGGGATCAATGGACCGCCACCTACTGGTATTTGGTCTGCCCTGGCAAG
TATGCCCCGTCAAAACCGAACACAATCCTACACCGCACCCCCTTGAGACG
TTGGGCCCCCGCCCCTTGCAGCCTCCCATCCTCTTCCCCCCCCCCTGCAA
CAAACCCGCC
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