EY735836

Overview
NameEY735836
Unique NameEY735836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROPE (WD repeat-containing protein 48 homolog OS=Drosophila persimilis GN=GL16745 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++     K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAQKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROER (WD repeat-containing protein 48 homolog OS=Drosophila erecta GN=GG22678 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++     K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAQKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROAN (WD repeat-containing protein 48 homolog OS=Drosophila ananassae GN=GF12420 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++     K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAQKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: CFD1_SCHPO (Probable cytosolic Fe-S cluster assembly factor C806.02c OS=Schizosaccharomyces pombe GN=SPAC806.02c PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 2
Query:    8 SAEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFY-DLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW-DVKSQANVAKFDG---------------------HVGAVTAISFSENGYYLATAAHDG 451
            S  G+   T S DK+V +W+ +ED  +DC   L++HT +V+ VT H T    V+ S DN+ CF+ D      LT        G      + AF P+G  L +  ++  V +W  + S  +VA  D                      H GAV  IS+  N   L +A  DG
Sbjct:  387 SCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALT----CQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDVATIDSTNILRPALQEEWKQQTSLPHIHKGAVYTISWM-NDATLCSAGGDG 552          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_PONAB (WD repeat-containing protein 48 OS=Pongo abelii GN=WDR48 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 42/169 (24.85%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD 508
            G   ++ S+D TV+VW   +     C  TL+ H   V+A+      +   +A LD     +D+++   LT     V+ +   G  +   S A +  G I+ +G++E ++++WD ++ A + K  GH   V A+  + +G    + + DG ++LW L + +   ++   D
Sbjct:   87 GKTLISASSDTTVKVWNAHKGF---CMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_MACFA (WD repeat-containing protein 48 OS=Macaca fascicularis GN=WDR48 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 42/169 (24.85%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD 508
            G   ++ S+D TV+VW   +     C  TL+ H   V+A+      +   +A LD     +D+++   LT     V+ +   G  +   S A +  G I+ +G++E ++++WD ++ A + K  GH   V A+  + +G    + + DG ++LW L + +   ++   D
Sbjct:   87 GKTLISASSDTTVKVWNAHKGF---CMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_HUMAN (WD repeat-containing protein 48 OS=Homo sapiens GN=WDR48 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 42/169 (24.85%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD 508
            G   ++ S+D TV+VW   +     C  TL+ H   V+A+      +   +A LD     +D+++   LT     V+ +   G  +   S A +  G I+ +G++E ++++WD ++ A + K  GH   V A+  + +G    + + DG ++LW L + +   ++   D
Sbjct:   87 GKTLISASSDTTVKVWNAHKGF---CMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROVI (WD repeat-containing protein 48 homolog OS=Drosophila virilis GN=GJ15009 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++     K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAHKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROMO (WD repeat-containing protein 48 homolog OS=Drosophila mojavensis GN=GI19644 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++     K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAHKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
BLAST of EY735836 vs. ExPASy Swiss-Prot
Match: WDR48_DROME (WD repeat-containing protein 48 homolog OS=Drosophila melanogaster GN=CG9062 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ----VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 469
            G   ++ S D TV+VW   +     C  TL+ H   VQA+      +   +A LD     +D+++   LT     V+ +   G  +   S A +P G ++ +G++E +++IWD ++     K  GH   V  +  S +G  + + + DG +K+W+L
Sbjct:   85 GRNLISASCDTTVKVWNAQKGF---CMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRRMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237          
The following BLAST results are available for this feature:
BLAST of EY735836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
WDR48_DROPE3.109e-1126.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROER3.109e-1126.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROAN3.109e-1126.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]
CFD1_SCHPO3.109e-1130.41Probable cytosolic Fe-S cluster assembly factor C8... [more]
WDR48_PONAB4.061e-1124.85WD repeat-containing protein 48 OS=Pongo abelii GN... [more]
WDR48_MACFA4.061e-1124.85WD repeat-containing protein 48 OS=Macaca fascicul... [more]
WDR48_HUMAN4.061e-1124.85WD repeat-containing protein 48 OS=Homo sapiens GN... [more]
WDR48_DROVI4.061e-1126.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROMO4.061e-1126.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROME4.061e-1126.92WD repeat-containing protein 48 homolog OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735836 ID=EY735836; Name=EY735836; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCAGAAGGTGATCTATTCTTAACAGGCTCGGCTGATAAGA
CTGTTCGTGTGTGGCAAGGATCTGAAGATGGAAATTATGATTGTAAGCAC
ACTTTGAAGGATCATACTGCTGAGGTGCAAGCTGTCACGGTCCATGCCAC
GAACAAATACTTTGTGACTGCTTCTCTGGATAATACATGGTGCTTTTACG
ATCTTTCTTCTGGTATATGCCTGACACAGGTTTCAGATGCTGGAACCGAC
GGTAGACCTGAAGGTTATACATCTGCAGCTTTTCATCCTGATGGTCTCAT
CCTTGGAACGGGCACCTCAGAAGCTCTTGTTAAGATTTGGGATGTGAAAA
GTCAGGCAAATGTGGCGAAATTTGATGGACATGTTGGAGCAGTTACAGCC
ATATCCTTTTCAGAAAATGGTTACTACCTTGCGACGGCAGCCCATGATGG
TGTGAAGCTGTGGGACCTGCGTAAATTGAAGAACTTCCGGTCATTTGAAT
CTTCTGATTCTGAGACACCTACCAACTCAGTGGATTTCGACCATAGTGGA
TCTTACCTCGCAGTTGCAAGTGCAGATATAAGAGTCTACCAAGTGGCCAC
TGTTACAGCTGATTGGAATTGTATCAAAACTTTTCCTGATTTATCAGGCA
CAGGTAAGGCAACTTGTGTGAAATTTGGGCCCCCATCGCTACTACCTTGC
TGTGGGATCAATGGACCGCCACCTACTGGTATTTGGTCTGCCCTGGCAAG
TATGCCCCGTCAAAACCGAACACAATCCTACACCGCACCCCCTTGAGACG
TTGGGCCCCCGCCCCTTGCAGCCTCCCATCCTCTTCCCCCCCCCCTGCAA
CAAACCCGCC
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