EY735834

Overview
NameEY735834
Unique NameEY735834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735834 vs. ExPASy Swiss-Prot
Match: OADC_PSE14 (Oxaloacetate decarboxylase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_1328 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15
Identity = 55/195 (28.21%), Postives = 94/195 (48.21%), Query Frame = 1
Query:   88 KSLRQILELPGVHQGPACFDALSAKLVEKXXXXXXXXXXXXXXAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKACGHTQGRKVVSKEEAVMRXKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSXGFTDAGADVLFIDALASXEDMKAFCE 672
            +S R +          + FD +SA++                    LA PD   I+  E V+Q   I +   +PVI D D+GYGNA+NV RTV    +AG + + +ED + P   G  +   ++S  E V + +AA++AR +   ++ I ART++   + ++E++ R   +  AGAD + I  +   + +    E
Sbjct:   11 RSFRALTSSNSCFHTASVFDPMSARIAADLGFEVGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAQLPVIADADHGYGNALNVMRTVVELERAGISALTIEDTLLPAQFGR-KSTDLISTAEGVGKIRAALEARVD--PEMSIFARTNA-AIIPVQEAISRVQQYQAAGADGITIVGIRDFDHLAQISE 201          
BLAST of EY735834 vs. ExPASy Swiss-Prot
Match: OADC2_PSEPW (Oxaloacetate decarboxylase 2 OS=Pseudomonas putida (strain W619) GN=PputW619_5152 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15
Identity = 60/188 (31.91%), Postives = 89/188 (47.34%), Query Frame = 1
Query:  127 QGPAC------FDALSAKLVEKXXXXXXXXXXXXXXAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKACGHTQGRKVVSKEEAVMRXKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSXGFTDAGADVLFIDALASXEDMKAFCE 672
            QG  C      FD +S ++                    L  PD   ++  E V+Q   + +A  IPVI D D+G+GNA+NV RTV    KAG A + LED   P A    Q   ++ +EEA  +  AA  +R  S   + I+ART+   A +LE+S+ R+  +  AGAD + +  +     + A  E
Sbjct:   18 QGHVCKFAASVFDPISVRMASDLGFEVGIQGGSVASLQVLGAPDIALLTLDEYVEQVTRVGRASQIPVIADADHGFGNALNVMRTVSELQKAGVAALTLEDTHLP-ARYEEQSPVLIGEEEAAAKIYAARFSR--SDDSLSIIARTNV-AATTLEDSIARTAAYEKAGADAICLVGVKDFHHLAALTE 201          
BLAST of EY735834 vs. ExPASy Swiss-Prot
Match: OADC_PSESM (Oxaloacetate decarboxylase OS=Pseudomonas syringae pv. tomato GN=PSPTO_1443 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15
Identity = 55/195 (28.21%), Postives = 94/195 (48.21%), Query Frame = 1
Query:   88 KSLRQILELPGVHQGPACFDALSAKLVEKXXXXXXXXXXXXXXAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKACGHTQGRKVVSKEEAVMRXKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSXGFTDAGADVLFIDALASXEDMKAFCE 672
            +S R +          + FD +SA++                    LA PD   I+  E V+Q   I +   +PVI D D+GYGNA+NV RTV    +AG + + +ED + P   G  +   ++S  E V + +AA++AR +   ++ I ART++   + ++E++ R   +  AGAD + I  +   + +    E
Sbjct:   11 RSFRALTSSNSCFHTASVFDPMSAQIAADLGFEVGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAQLPVIADADHGYGNALNVMRTVVELERAGISALTIEDTLLPAQFGR-KSTDLISTAEGVGKIRAALEARVD--PEMSIFARTNA-AIIPVQEAISRVQQYQAAGADGITIVGIRDFDHLAQVSE 201          
BLAST of EY735834 vs. ExPASy Swiss-Prot
Match: PEPM_STRHY (Phosphoenolpyruvate phosphomutase OS=Streptomyces hygroscopicus GN=bcpB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14
Identity = 65/216 (30.09%), Postives = 100/216 (46.30%), Query Frame = 1
Query:   94 LRQILELPGVHQGPACFDALSAKLVEKXXXXXXXXXXXXXXAARLALPDTGFISYGEMVDQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKACG-HTQGRKVVSKEEAVMRXKAAVDARKESGSDIVIVARTDSR-QALSLEESLRRSXGFTDAGADVLFIDALASXEDMKAFCEISPLXQKWPICLKVEEKPNT 732
            LR +L  PG  Q     D LSA++                  AR  + D+   S+ E++     +T AV  +PV+ DGD GYGN    +R      + G AG+  ED+V PK       G ++    E   + +A  DA+++   D V+VART++    L +EE+L R+  + +AGAD LFI +      M    +I+   ++W     V   P T
Sbjct:   22 LRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTAR-GVRDSDEASWTELLTLVGTMTDAVPGVPVLVDGDTGYGNFNTARRFAGRAERVGAAGVCFEDKVFPKMNSFFGDGHQLAPVAEFCGKIRACKDAQRD--PDFVVVARTEALISKLPMEEALDRAAAYAEAGADALFIHS-----RMNTPQQIATFMERWEGSTPVLIAPTT 229          
BLAST of EY735834 vs. ExPASy Swiss-Prot
Match: PEPM_MYTED (Phosphoenolpyruvate phosphomutase OS=Mytilus edulis PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 57/195 (29.23%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   94 LRQILELPGVHQGPACFDALSAKLVEKXXXXXXXXXXXXXXAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKACGHTQGR--KVVSKEEAVMRXKAAVDARKESGSDIVIVARTDSRQA-LSLEESLRRSXGFTDAGAD-VLFIDALASXEDMKAF 666
            L+Q+L    +       + LSA++V++              +A+L + D+   S+ ++V+  + ++ A  +P++ D D GYGN  N +R V+     G AG  LED++ PK      GR   +   EE  ++ KA  D+  ++  D  IVAR ++  A   L+E+L+R+  + +AGAD +L     A   D++AF
Sbjct:   11 LKQMLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSV-SAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDS--QTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAF 202          
BLAST of EY735834 vs. ExPASy Swiss-Prot
Match: PEPM_TETPY (Phosphoenolpyruvate phosphomutase OS=Tetrahymena pyriformis GN=PEPM PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 55/178 (30.90%), Postives = 95/178 (53.37%), Query Frame = 1
Query:  145 DALSAKLVEKXXXXXXXXXXXXXXAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKACG-HTQGRKVVSK-EEAVMRXKAAVDARKESGSDIVIVARTDSRQA-LSLEESLRRSXGFTDAGAD-VLFIDALASXEDMKAF 666
            + LSA +VE+              AA + + D+   SY ++++  + ++    IP++ DGD GYGN  N +R VK   +   AG+ LED++ PK       GR+ ++   E V + KA  D +++  +D  +VAR ++  A   LEE+L+R+  + +AGAD +L    L    +++AF
Sbjct:   36 NGLSAAIVEETGFKGIWGSGLSISAA-MGVRDSNEASYTQVLEVLEFMSDRTKIPILLDGDTGYGNYNNARRLVKKLEQRSIAGVCLEDKIFPKRNSLLDDGRQELAPINEFVAKIKACKDTQQD--ADFQVVARVEAFIAGWGLEEALKRAEAYRNAGADAILMHSKLKEPSEIEAF 210          
BLAST of EY735834 vs. ExPASy Swiss-Prot
Match: ACEA_KLULA (Isocitrate lyase OS=Kluyveromyces lactis GN=ICL1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11
Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 1
Query:  307 PVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSP-KACGHTQGRKVVSKEEAVMRXKAAVDARKESGSDIVIVARTDSRQALSLEES 579
            P++ DGD G+G    V +  K +I+ G AGI +EDQ S  K CGH  GR V+  +E + R      A    GSD+++VARTDS  A  L  +
Sbjct:  166 PIVADGDAGHGGLTAVFKLTKMFIERGAAGIHIEDQTSTNKKCGHMAGRCVIPVQEHINRLITCRMAADVLGSDLILVARTDSEAATLLSST 257          
The following BLAST results are available for this feature:
BLAST of EY735834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
OADC_PSE143.612e-1528.21Oxaloacetate decarboxylase OS=Pseudomonas syringae... [more]
OADC2_PSEPW3.612e-1531.91Oxaloacetate decarboxylase 2 OS=Pseudomonas putida... [more]
OADC_PSESM6.161e-1528.21Oxaloacetate decarboxylase OS=Pseudomonas syringae... [more]
PEPM_STRHY5.216e-1430.09Phosphoenolpyruvate phosphomutase OS=Streptomyces ... [more]
PEPM_MYTED3.381e-1329.23Phosphoenolpyruvate phosphomutase OS=Mytilus eduli... [more]
PEPM_TETPY5.767e-1330.90Phosphoenolpyruvate phosphomutase OS=Tetrahymena p... [more]
ACEA_KLULA5.397e-1141.30Isocitrate lyase OS=Kluyveromyces lactis GN=ICL1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-F09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735834 ID=EY735834; Name=EY735834; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCCCACGCGTCCGAATAAATCGAACCCGGGTCTATCGAAA
AAACAGCACTGGAGTTGAAGCTTGCTTATCTCCGGCTAAATCACTCAGAC
AGATTCTTGAATTGCCAGGAGTTCATCAAGGCCCTGCTTGTTTCGATGCT
CTCAGTGCCAAGCTTGTTGAAAAATCTGGTTTTAGTTTCTGTTTTACCAG
TGGATTTTCAATATCGGCTGCTCGACTGGCGCTGCCAGACACTGGATTTA
TTTCATATGGAGAGATGGTGGATCAGGGGCAGCTGATCACCCAAGCCGTG
TCAATCCCTGTTATTGGGGATGGCGATAATGGATATGGGAATGCGATGAA
TGTCAAGAGAACTGTAAAGGGATATATTAAAGCGGGCTTTGCAGGGATCA
TTCTTGAAGATCAGGTATCTCCGAAAGCTTGCGGTCATACACAGGGCCGG
AAAGTTGTGTCTAAAGAGGAAGCAGTGATGCGGANTAAAGCAGCTGTTGA
TGCTCGGAAAGAAAGTGGCTCTGACATTGTTATTGTGGCTCGAACTGATT
CGCGCCAAGCTCTGTCTCTGGAGGAATCACTCCGGAGGTCAANGGGCTTT
ACTGATGCCGGAGCTGATGTTCTTTTTATTGATGCACTTGCCTCANAGGA
AGATATGAAGGCTTTCTGTGAAATCTCTCCTCTANTTCAAAAATGGCCAA
TATGCTTGAAGGTGGAGGAAAAACCCAATACTTAATCACTTGAGCTTGAA
AAACTCGGAATTAACTTGTGGCATACCCCTTTCCTGATAGGAGTTTCCGT
TCAANCATGCAGGATGCCTTACTGCCATTTAAGGAGGTCGGATTCCTCAC
CTGGAAGTATCCGGCCT
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