EY735830

Overview
NameEY735830
Unique NameEY735830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13
Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 1
Query:  277 EEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKA 585
            +E    + KK RL+ DQ   LE+ F+  + L P +K  LA++LGL+ RQ+ VWFQNRRAR K K+ E D        + LR    NL +EN  L  E+ EL+A
Sbjct:  121 DEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVD-------CEFLRRCCENLTEENRRLQKEVTELRA 216          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.128e-12
Identity = 51/141 (36.17%), Postives = 72/141 (51.06%), Query Frame = 1
Query:  187 HEDKTSTKRKQIYGREFQAMMDCLEEEDCRE---------EASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELK 582
            H   +S    ++  RE     +  EEE+  E         E   +  KK RLT  Q   LE++F+  + L P +K  LA +L L+PRQ+ VWFQNRRAR K K+ E D   LK   + L  ++  LQ+E +    EL+ LK
Sbjct:   66 HSGVSSFSSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQ----ELKTLK 202          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 1
Query:  259 EEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELR 573
            E  D  +       KK RL+ +Q   LE +F+  + L P +K  LA  L L+PRQ+ VWFQNRRAR K K+ E D   LK   + L  ++  LQ+E   L   LR
Sbjct:  139 EAADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTLR 243          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 1
Query:  259 EEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELR 573
            E  D  +       KK RL+ +Q   LE +F+  + L P +K  LA  L L+PRQ+ VWFQNRRAR K K+ E D   LK   + L  ++  LQ+E   L   LR
Sbjct:  139 EAADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALR 243          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11
Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  292 ATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELR 573
            A+ KK RLT +Q   LE +F   N L    K +LA +LGL  RQ+ VWFQNRRAR K K+ E D  LL+   D L  D+  L+++     AELR
Sbjct:  114 ASRKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLRRD----LAELR 203          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11
Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 1
Query:  295 TEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELK 582
            T KK +LT +Q   LE +F V N L   +K +LA +L L+PRQ+ VWFQNRRAR K K+ E D   LK   +       +L +EN+ L  EL EL+
Sbjct:  113 TRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE-------SLTEENKQLKHELMELR 201          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11
Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 1
Query:  295 TEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELK 582
            T KK +LT +Q   LE +F V N L   +K +LA +L L+PRQ+ VWFQNRRAR K K+ E D   LK   +       +L +EN+ L  EL EL+
Sbjct:  113 TRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE-------SLTEENKQLKHELMELR 201          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.801e-11
Identity = 61/186 (32.80%), Postives = 87/186 (46.77%), Query Frame = 1
Query:  163 GSETFDHFHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAK------LCQENEET-------SHAVEAEAPVSEQSKNHVSSENA 681
            G   FD     KT   R+ + G         + E+D      +   KK RLT +Q   LE++F  ++ L P +K  LA  L L  RQ+ VWFQNRRAR K K  E +   LK  + +L+  +  LQ E E    ELR LK        +C   E         S+AV+  A +S +S+  +SS ++
Sbjct:   30 GMRDFDINQTPKTEEDREWMIGATPH-----VNEDDSNSGGRR--RKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVE----ELRALKPSSTSALTMCPRCERVTDAVDNDSNAVQEGAVLSSRSRMTISSSSS 204          
The following BLAST results are available for this feature:
BLAST of EY735830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
HAT4_ARATH9.552e-1342.72Homeobox-leucine zipper protein HAT4 OS=Arabidopsi... [more]
HAT9_ARATH2.128e-1236.17Homeobox-leucine zipper protein HAT9 OS=Arabidopsi... [more]
HOX7_ORYSJ4.741e-1240.00Homeobox-leucine zipper protein HOX7 OS=Oryza sati... [more]
HOX7_ORYSI4.741e-1240.00Homeobox-leucine zipper protein HOX7 OS=Oryza sati... [more]
HOX26_ORYSJ1.056e-1145.74Putative homeobox-leucine zipper protein HOX26 OS=... [more]
HOX18_ORYSJ1.056e-1144.79Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
HOX18_ORYSI1.056e-1144.79Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
ATHBX_ARATH1.801e-1132.80Homeobox-leucine zipper protein ATHB-X OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-F03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735830 ID=EY735830; Name=EY735830; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTTAGCTTTAAGCAT
GAAGCGTTTCAGCTCTTCAGATTCCTTTGATGCTCTGATCACTGTCTATA
AATCTGCAGGTAAGCACAATTCAACTACAGATTTATCCTGAAGTTAAGTA
TTTTTGTTTATGGGTTCTGAGACTTTTGATCATTTTCATGAAGACAAGAC
GAGTACAAAGAGAAAGCAAATTTACGGTAGAGAGTTTCAGGCCATGATGG
ATTGCTTAGAAGAAGAAGACTGCAGAGAGGAAGCTAGCCAAGCTACAGAA
AAGAAGCGTCGATTAACTGTGGATCAAGTTAAGGCCTTGGAGAAGAATTT
TGAGGTCGATAACAAGCTAGAGCCTGATAGGAAAGTTAAATTAGCTGAAG
AATTGGGACTGCAACCGCGACAAATTGCTGTTTGGTTCCAAAACCGGCGC
GCTCGTTTGAAGAGCAAAGAATTGGAGAGAGACTATGGCCTTCTCAAAGC
TAACTATGATGCTTTAAGGCTTGACCACAATAATCTTCAACAAGAAAATG
AAGCCCTTACTGCTGAGTTAAGGGAATTGAAAGCTAAGCTTTGCCAAGAA
AATGAAGAGACTAGTCATGCTGTTGAGGCAGAGGCCCCTGTTTCCGAACA
GAGCAAAAACCACGTTTCAAGTGAAAATGCAAATGCTCAGCTATTGACAT
CCCCACCTTCTTTTTCTTCTCTTTTCACTGGCTCTTCTTCCTCTTCGCAT
CCATCAATGAACTGGGGTCATTTTTCTGATTCCAGAACAATATTGAGTAA
TGTCTATCAGCAGCCTCCCCTTGTGAAAGTTGAAAAAGCAAGCCTGTTGT
TTAT
back to top