EY735826

Overview
NameEY735826
Unique NameEY735826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB18_CAEEL (Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.002e-30
Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 3
Query:   15 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSL 380
            R+KL IWDTAGQERF TLT SYYRGA G+I VYDVT R +F  L+  W +EV+ Y TN + +K++V NK+D  + R VTREEG+  A+ H+ LF+E SAK  E V+  F++L+ KI++ P L
Sbjct:   59 RVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMQEVDTYCTNDNIIKMMVANKIDMPN-RVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB18_CAEBR (Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.460e-30
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 3
Query:   15 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSL 380
            R+KL IWDTAGQERF TLT SYYRGA G+I VYDVT R +F  L   W  EV+ Y TN + +K++V NK+D  + R VTREEG+  A+ H+ LF+E SAK  E V+  F++L+ KI++ P L
Sbjct:   59 RVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIKMMVANKIDMPN-RTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.028e-26
Identity = 67/160 (41.88%), Postives = 95/160 (59.38%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQIL---------KQKEVQESARGGNCC 464
            K +KL IWDTAGQE F ++T SYYRG+ G +LVYD+TRR+TF +L + W K+   Y+ N +   IL+GNK D +S+RAV+ EEG   A E+  +FLE SAK   +V++ F +   KI E    +++G   + N+           KQ    +   GG CC
Sbjct:   52 KAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHL-TCWLKDARSYA-NSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEK---IQKGDFDINNESFGIKLGAPTSKQDGTDQKPAGGGCC 206          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.485e-25
Identity = 67/152 (44.08%), Postives = 91/152 (59.87%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQILKQKEVQESARGGNCCS 467
            K +KL IWDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+   W  E++ Y+ +++  K+LVGNK D    R V+ E G  LA E    FLE SAK+  +V++ F  +  +I     +  Q +         Q   Q  A+  +CCS
Sbjct:   55 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-SENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQPATNASKPATVQMRGQPVAQQSSCCS 202          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25
Identity = 64/154 (41.56%), Postives = 97/154 (62.99%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQ-----ILKQKEVQESARGGN 458
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++   +S N + V +L+GNK D +S R V +EEG   A+EH  +F+E SAK   +V++ F +   +I E    +++G   + N+     I  Q     ++ GGN
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEGVFDINNEANGIKIGPQHAATNASHGGN 201          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.320e-25
Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCF---KDLLYKILEDP--SLLEQGSAVVKNQILKQKE--VQESARGGNCCS 467
            K +KL IWDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++   ++ N +   +LVGNK D    RAV+ EEG   A+EH  +F+E SAK  ++V++ F      +YK ++D    +  +   +    ++  +      S++GG CCS
Sbjct:   53 KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGYVVPGQSGGAGSSSQGGGCCS 209          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.369e-25
Identity = 67/163 (41.10%), Postives = 98/163 (60.12%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCF----KDLLYKILEDPSLLEQGSAVVK--------NQILKQKEVQESARGGNCC 464
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++   +S N + V +L+GNK D +S R V +EEG   A+EH  +F+E SAK   +V++ F    K++  KI E    +   +  +K        N  L   +  + A GG CC
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATLAGNQGGQQA-GGGCC 212          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25
Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQILKQKEVQESARGGNCC 464
            K +KL IWDTAGQERF T+TSSYYRGAHGII+VYD T  E+F N+   W  E++ Y+ N+   K+L+GNK D    + V+ E G  LA E    FLE SAK++ +V+Q F  +  +I +        +       ++ K        G CC
Sbjct:   55 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGCC 203          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25
Identity = 59/134 (44.03%), Postives = 90/134 (67.16%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQ 413
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++   +S N + V +L+GNK D +S R V +EEG   A+EH  +F+E SAK   +V++ F +   +I E    +++G   + N+
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEGVFDINNE 181          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25
Identity = 59/134 (44.03%), Postives = 90/134 (67.16%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQ 413
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++   +S N + V +L+GNK D +S R V +EEG   A+EH  +F+E SAK   +V++ F +   +I E    +++G   + N+
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEGVFDINNE 181          
The following BLAST results are available for this feature:
BLAST of EY735826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 432
Match NameE-valueIdentityDescription
RAB18_CAEEL2.002e-3054.10Ras-related protein Rab-18 OS=Caenorhabditis elega... [more]
RAB18_CAEBR4.460e-3054.10Ras-related protein Rab-18 OS=Caenorhabditis brigg... [more]
RAB2A_DICDI1.028e-2641.88Ras-related protein Rab-2A OS=Dictyostelium discoi... [more]
RIC1_ORYSJ1.485e-2544.08Ras-related protein RIC1 OS=Oryza sativa subsp. ja... [more]
RAB2A_RAT2.533e-2541.56Ras-related protein Rab-2A OS=Rattus norvegicus GN... [more]
RAB2A_MAIZE4.320e-2540.88Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A P... [more]
RAB2A_CHICK7.369e-2541.10Ras-related protein Rab-2A OS=Gallus gallus GN=RAB... [more]
RABD1_ARATH9.624e-2541.72Ras-related protein RABD1 OS=Arabidopsis thaliana ... [more]
RAB2A_RABIT9.624e-2544.03Ras-related protein Rab-2A OS=Oryctolagus cuniculu... [more]
RAB2A_PONAB9.624e-2544.03Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-E10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735826 ID=EY735826; Name=EY735826; organism=Citrus sinensis; type=EST; length=791bp
CCACGCGTCCGAAAAGACTGAAGCTGACAATTTGGGACACAGCTGGACAG
GAGAGATTTGGGACATTGACGAGCTCTTACTATAGAGGTGCACATGGAAT
TATCCTTGTTTATGACGTGACACGACGAGAAACCTTTACCAACTTGTCAA
GTGTATGGGCAAAGGAAGTAGAGCTTTACTCTACCAATCAAGATTGTGTC
AAAATTTTAGTGGGAAATAAAGTTGACAGGGATAGTGAAAGGGCTGTTAC
CAGAGAGGAGGGGATGATTCTTGCACAGGAGCATAAATGTTTGTTTCTTG
AATGTAGTGCTAAAAATACAGAACACGTGAAGCAGTGCTTTAAAGATCTC
TTATATAAGATTCTTGAGGATCCCAGTTTATTAGAACAAGGATCTGCAGT
GGTGAAGAATCAAATTTTGAAACAGAAAGAAGTCCAGGAATCGGCTCGTG
GTGGTAATTGCTGCTCTTAATTGATGCCCCCAACAAAGTGATTCAGCACA
AACATACTACCCGATAAATCAAAATGGAAGTCCAGAAACTATCAGCACAA
TTGGATGCGGGTGCTTAGATGGTTGAACACGATCCAGAATCGCATACATT
ACATGTATGGTCGAACATGCTCCAGAACCGGATCAAGGAAATGGGTGTTC
ATCGTAGAGTTTCGCGGGAGCGTGCGAGTAGCCGGAATCGTAGGGTGGAA
ACCGCGAGGGGCGGGTGCGCGTGGCATAAGGCGGTCATCTTGGCCCCATC
CTCAGCGGCATCGCGGCCGTGAGCCACTACATCCCCCTGCG
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