EY735826

Overview
NameEY735826
Unique NameEY735826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25
Identity = 59/134 (44.03%), Postives = 90/134 (67.16%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQ 413
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++   +S N + V +L+GNK D +S R V +EEG   A+EH  +F+E SAK   +V++ F +   +I E    +++G   + N+
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEGVFDINNE 181          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_MACFA (Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25
Identity = 59/134 (44.03%), Postives = 90/134 (67.16%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQ 413
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++   +S N + V +L+GNK D +S R V +EEG   A+EH  +F+E SAK   +V++ F +   +I E    +++G   + N+
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEGVFDINNE 181          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25
Identity = 59/134 (44.03%), Postives = 90/134 (67.16%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQ 413
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++   +S N + V +L+GNK D +S R V +EEG   A+EH  +F+E SAK   +V++ F +   +I E    +++G   + N+
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEGVFDINNE 181          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25
Identity = 59/134 (44.03%), Postives = 90/134 (67.16%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQ 413
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++   +S N + V +L+GNK D +S R V +EEG   A+EH  +F+E SAK   +V++ F +   +I E    +++G   + N+
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEGVFDINNE 181          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25
Identity = 55/124 (44.35%), Postives = 85/124 (68.55%), Query Frame = 3
Query:   18 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCF----KDLLYKILEDPS 377
            +KL IWDTAGQERF T+TS+YYRGAHGII VYDVT + +F +++  W ++++ Y+T+  C K+L+GNK+D    R V+ +E   +A+++   ++E SAK   +V++ F    K L  K+ + PS
Sbjct:   56 IKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS 178          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.257e-24
Identity = 69/166 (41.57%), Postives = 96/166 (57.83%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCF---KDLLYKILEDPSLLEQGSAVVKNQILKQK-----------EVQESARGGNCCS 467
            K +KL IWDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++   ++ N +   +LVGNK D    RAV+ EEG   A+EH  +F+E SAK  ++V++ F      +YK ++D      G   V N+    K               S++GG CCS
Sbjct:   53 KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQD------GVFDVSNESYGIKVGYAIPGQSGGAGSSSSQGGGCCS 210          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.257e-24
Identity = 71/180 (39.44%), Postives = 105/180 (58.33%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQILKQKEVQESARGGNCCS*LMPPTK*FSTNILPDKSKWKSRNYQHN 551
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++   +S++ + V +L+GNK D +S R V REEG   A+EH  +F+E SAK   +V++ F +   +I      ++QG   V N+    K               + P +  ST++ P  S+  SR+   N
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK---IQQGLFDVHNEANGIK---------------IGPQQSISTSVGPSASQRNSRDIGSN 212          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.144e-24
Identity = 65/152 (42.76%), Postives = 89/152 (58.55%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQILKQKEVQESARGGNCCS 467
            K +KL IWDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+   W  E++ Y+++ +  K+LVGNK D  + + V  E     A E    F+E SAKN  +V+Q F  +   I +   +  Q +A        Q   Q   +  +CCS
Sbjct:   55 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKD--RMASQPAAANARPATVQIRGQPVNQKTSCCS 202          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.144e-24
Identity = 55/124 (44.35%), Postives = 84/124 (67.74%), Query Frame = 3
Query:   18 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCF----KDLLYKILEDPS 377
            +KL IWDTAGQERF T+TS+YYRGAHGII VYDVT + +F +++  W ++++ Y+T+  C K+L+GNK+D    R V  +E   +A+++   ++E SAK   +V++ F    K L  K+ + PS
Sbjct:   56 IKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS 178          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.800e-24
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDL---LYKILED 371
            K++KL IWDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++   ++ N +   +L+GNK D    RAVT EEG   A+EH  +FLE SA+   +V++ F +    +YK ++D
Sbjct:   53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQD 173          
The following BLAST results are available for this feature:
BLAST of EY735826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 432
Match NameE-valueIdentityDescription
RAB2A_MOUSE9.624e-2544.03Ras-related protein Rab-2A OS=Mus musculus GN=Rab2... [more]
RAB2A_MACFA9.624e-2544.03Ras-related protein Rab-2A OS=Macaca fascicularis ... [more]
RAB2A_HUMAN9.624e-2544.03Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2... [more]
RAB2A_CANFA9.624e-2544.03Ras-related protein Rab-2A OS=Canis familiaris GN=... [more]
RAB1_THEPA9.624e-2544.35Ras-related protein Rab-1 OS=Theileria parva GN=ra... [more]
RAB2B_MAIZE1.257e-2441.57Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B P... [more]
RAB2B_HUMAN1.257e-2439.44Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2... [more]
YPTM2_MAIZE2.144e-2442.76GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=... [more]
RAB1_THEAN2.144e-2444.35Ras-related protein Rab-1 OS=Theileria annulata GN... [more]
YPTV4_VOLCA2.800e-2447.97GTP-binding protein yptV4 OS=Volvox carteri GN=YPT... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-E10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735826 ID=EY735826; Name=EY735826; organism=Citrus sinensis; type=EST; length=791bp
CCACGCGTCCGAAAAGACTGAAGCTGACAATTTGGGACACAGCTGGACAG
GAGAGATTTGGGACATTGACGAGCTCTTACTATAGAGGTGCACATGGAAT
TATCCTTGTTTATGACGTGACACGACGAGAAACCTTTACCAACTTGTCAA
GTGTATGGGCAAAGGAAGTAGAGCTTTACTCTACCAATCAAGATTGTGTC
AAAATTTTAGTGGGAAATAAAGTTGACAGGGATAGTGAAAGGGCTGTTAC
CAGAGAGGAGGGGATGATTCTTGCACAGGAGCATAAATGTTTGTTTCTTG
AATGTAGTGCTAAAAATACAGAACACGTGAAGCAGTGCTTTAAAGATCTC
TTATATAAGATTCTTGAGGATCCCAGTTTATTAGAACAAGGATCTGCAGT
GGTGAAGAATCAAATTTTGAAACAGAAAGAAGTCCAGGAATCGGCTCGTG
GTGGTAATTGCTGCTCTTAATTGATGCCCCCAACAAAGTGATTCAGCACA
AACATACTACCCGATAAATCAAAATGGAAGTCCAGAAACTATCAGCACAA
TTGGATGCGGGTGCTTAGATGGTTGAACACGATCCAGAATCGCATACATT
ACATGTATGGTCGAACATGCTCCAGAACCGGATCAAGGAAATGGGTGTTC
ATCGTAGAGTTTCGCGGGAGCGTGCGAGTAGCCGGAATCGTAGGGTGGAA
ACCGCGAGGGGCGGGTGCGCGTGGCATAAGGCGGTCATCTTGGCCCCATC
CTCAGCGGCATCGCGGCCGTGAGCCACTACATCCCCCTGCG
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