EY735826

Overview
NameEY735826
Unique NameEY735826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.897e-23
Identity = 65/156 (41.67%), Postives = 93/156 (59.62%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKI---LEDPSLLEQGSAVVKNQILKQKEVQESARGGNCCS 467
            KR+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT   +F N+ + W + +E ++++ +  KILVGNK D D S+RAV   +G  LA E+   F E SAK   +V++ F  +   I   L D    ++    +  +   Q   Q +A+   C S
Sbjct:   62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQSGNQAAAKSACCGS 215          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.008e-23
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCF 341
            K +KL IWDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+   W  E++ Y+  ++  K+LVGNK D  ++R V+ +     A+     FLE SAKN  +V++ F
Sbjct:   55 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAF 162          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.008e-23
Identity = 59/150 (39.33%), Postives = 90/150 (60.00%), Query Frame = 3
Query:   15 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQILKQKEVQESARGGNCC 464
            ++KL IWDTAGQERF ++T +YYR AH ++L+YD+T +++F N+ + W  E++ Y+  QD V +L+GNKVD   ER V RE+G  LA+E+   F+E SAK+  +V     DL +  +          A  + +      V+   RG +CC
Sbjct:  113 KVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQA-WLTEIQEYA-QQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNV-----DLAFTAIAKELKQRSTKAPSEPRFRLHDYVKREGRGVSCC 255          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB12_MOUSE (Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 9.008e-23
Identity = 56/122 (45.90%), Postives = 87/122 (71.31%), Query Frame = 3
Query:    6 RPKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCL-FLECSAKNTEHVKQCFKDLLYKILE 368
            R K+++L IWDTAGQERF ++TS+YYR A GIILVYD+T++ETF +L   W K ++ Y+ ++D   +LVGNK+D +++R ++R++G   AQ+   + F E SAK+  +V + F  L+  IL+
Sbjct:   86 RGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPK-WMKMIDKYA-SEDAELLLVGNKLDCETDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILK 205          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 64/156 (41.03%), Postives = 85/156 (54.49%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQILKQKEVQ-----ESARGGNCC 464
            K +KL IWDTAGQERF T+TSSYYRGAHGI +VYDVT  ++F N+   W +E++ Y+T +   K+LVGNK D   ++ V        A      FLE SAKN  +V+Q F  +  +I E       GS++  N       V       +   G CC
Sbjct:   55 KTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMGSSIATNNTKASVNVSPGHGVSNNSSGGCC 203          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 65/154 (42.21%), Postives = 92/154 (59.74%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCF---KDLLYKILEDPSLLEQGSAVVKNQILKQKEVQESARGGNCC 464
            K++KL +WDTAGQERF T+T++YYRGA GIILVYDVT   TFTN+   W K V  ++ N +   +LVGNK D ++ R VT ++G  LA+E    F+E SAKN ++V + F     L+ + ++   L+  G+    N  +       S    NCC
Sbjct:   67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-NDEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINSGSGNSSK--SNCC 215          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 63/156 (40.38%), Postives = 94/156 (60.26%), Query Frame = 3
Query:    3 TRPKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQILKQKEVQESARG--GNCC 464
            ++ KR+KL +WDTAGQERF T+T++YYRGA GI+L+YDVT   +F N+ + W + V  ++ N+D    LVGNK D +  R V++E+G  LA +    FLE SAK+ E+V   F +L   I+++  + E    V         +V ++  G   NCC
Sbjct:   58 SKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVEN-WFQTVTQHA-NEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELA-SIIQEKHVEENIGGVGGASGAGGIDVSQNNSGAKNNCC 210          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 3
Query:   15 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILEDPSLLEQGSAVVKNQILKQKEVQESA 446
            ++KL IWDTAGQE F ++T++YYRGAH  +L YD+T+R++F  LS  W  EV   S + + V  L+GNK D   +R +T EEG   A+E+  LF E SAK+ E V+  F  +  K+L   SL++QG+  V N+  K + +Q  A
Sbjct:   53 KIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLSG-WMDEVRQMS-SPNIVIALIGNKCDCKDKRVITTEEGAKNAKENDILFFETSAKDYESVESVFDGVSKKVL---SLIKQGTLTVVNK--KPQSIQLGA 189          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 63/153 (41.18%), Postives = 88/153 (57.52%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKILE--DPSLLEQGSAVVKNQILKQKEVQESARGGNCC 464
            K +KL IWDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+   W +E++ Y+ +++  K+LVGNK D  +++ V        A      FLE SAKN  +V+Q F  +  +I +   P     G    +   LK       +  G CC
Sbjct:   55 KTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYA-SENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG----ERPNLKIDSTPVKSASGGCC 201          
BLAST of EY735826 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 54/118 (45.76%), Postives = 81/118 (68.64%), Query Frame = 3
Query:   12 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEHVKQCFKDLLYKIL 365
            KR+KL +WDTAGQERF T+T++YYRGA GIILVYD+T  ++F N+ + W K ++  + +    ++L+GNK D +++R V +E+   LA+EH   F E SAK++ +V + F  L   IL
Sbjct:   55 KRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDIL 170          
The following BLAST results are available for this feature:
BLAST of EY735826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 432
Match NameE-valueIdentityDescription
RB1BV_BETVU6.897e-2341.67Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB... [more]
YPT1_PHYIN9.008e-2350.91Ras-like GTP-binding protein YPT1 OS=Phytophthora ... [more]
RAB26_RAT9.008e-2339.33Ras-related protein Rab-26 OS=Rattus norvegicus GN... [more]
RAB12_MOUSE9.008e-2345.90Ras-related protein Rab-12 OS=Mus musculus GN=Rab1... [more]
YPT1_NEUCR1.176e-2241.03GTP-binding protein ypt1 OS=Neurospora crassa GN=y... [more]
SEC4_YEAST1.176e-2242.21Ras-related protein SEC4 OS=Saccharomyces cerevisi... [more]
SEC4_CANAL1.176e-2240.38Ras-related protein SEC4 OS=Candida albicans GN=SE... [more]
RABQ_DICDI1.176e-2243.75Ras-related protein RabQ OS=Dictyostelium discoide... [more]
RAB1B_RAT1.176e-2241.18Ras-related protein Rab-1B OS=Rattus norvegicus GN... [more]
RAB13_MESAU1.176e-2245.76Ras-related protein Rab-13 OS=Mesocricetus auratus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-E10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735826 ID=EY735826; Name=EY735826; organism=Citrus sinensis; type=EST; length=791bp
CCACGCGTCCGAAAAGACTGAAGCTGACAATTTGGGACACAGCTGGACAG
GAGAGATTTGGGACATTGACGAGCTCTTACTATAGAGGTGCACATGGAAT
TATCCTTGTTTATGACGTGACACGACGAGAAACCTTTACCAACTTGTCAA
GTGTATGGGCAAAGGAAGTAGAGCTTTACTCTACCAATCAAGATTGTGTC
AAAATTTTAGTGGGAAATAAAGTTGACAGGGATAGTGAAAGGGCTGTTAC
CAGAGAGGAGGGGATGATTCTTGCACAGGAGCATAAATGTTTGTTTCTTG
AATGTAGTGCTAAAAATACAGAACACGTGAAGCAGTGCTTTAAAGATCTC
TTATATAAGATTCTTGAGGATCCCAGTTTATTAGAACAAGGATCTGCAGT
GGTGAAGAATCAAATTTTGAAACAGAAAGAAGTCCAGGAATCGGCTCGTG
GTGGTAATTGCTGCTCTTAATTGATGCCCCCAACAAAGTGATTCAGCACA
AACATACTACCCGATAAATCAAAATGGAAGTCCAGAAACTATCAGCACAA
TTGGATGCGGGTGCTTAGATGGTTGAACACGATCCAGAATCGCATACATT
ACATGTATGGTCGAACATGCTCCAGAACCGGATCAAGGAAATGGGTGTTC
ATCGTAGAGTTTCGCGGGAGCGTGCGAGTAGCCGGAATCGTAGGGTGGAA
ACCGCGAGGGGCGGGTGCGCGTGGCATAAGGCGGTCATCTTGGCCCCATC
CTCAGCGGCATCGCGGCCGTGAGCCACTACATCCCCCTGCG
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