EY735821

Overview
NameEY735821
Unique NameEY735821
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_ECO57 (ATP-dependent DNA helicase recG OS=Escherichia coli O157:H7 GN=recG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.809e-36
Identity = 91/243 (37.45%), Postives = 127/243 (52.26%), Query Frame = 2
Query:   59 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYII 787
            R +A  +    +L  KLL ALP+  T +Q   ++EI  D+   VPM RL+QGDVG GKT+VA LA +  I  G Q A M PTELLA QH  +     + +  +     +  L G    K     ++ + +G + +++GTH++  E+V+F+ L L I+DEQ RFGV QR     K                      Q   PH L M+ATPIPRTLA+  Y D+  + I +LPP R P+ T  I
Sbjct:  245 RFHAQPLSANDALKNKLLAALPFKPTGAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGIE-----VGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEK-------------------GQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAI 463          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_ECOLI (ATP-dependent DNA helicase recG OS=Escherichia coli (strain K12) GN=recG PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.174e-36
Identity = 91/243 (37.45%), Postives = 126/243 (51.85%), Query Frame = 2
Query:   59 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYII 787
            R +A  +    +L  KLL ALP+  T +Q   ++EI  D+   VPM RL+QGDVG GKT+VA LA +  I  G Q A M PTELLA QH  +       +  +     +  L G    K     ++ + +G + +++GTH++  E+V+F+ L L I+DEQ RFGV QR     K                      Q   PH L M+ATPIPRTLA+  Y D+  + I +LPP R P+ T  I
Sbjct:  245 RFHAQPLSANDTLKNKLLAALPFKPTGAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIE-----VGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEK-------------------GQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAI 463          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAES (Transcription-repair-coupling factor OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mfd PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34
Identity = 89/255 (34.90%), Postives = 137/255 (53.73%), Query Frame = 2
Query:   35 LLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796
            L+D Y++  ++  Y  G  +  +       PY LT  Q  +I EI  D+++  PM+RLL GDVG GKT VA  A  + +  G Q AF+VPT +LA QHYE LL+ + +   +     I L++     K+ R  ++ L++G + +V+GTH L+ + +++  L L IVDE+QRFGV  + R  +              N D            VL ++ATPIPRTL +++ G   L+ I   P  R P++TY++E N
Sbjct:  587 LIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMERARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVE-----IQLVSRFRTAKEIRETKEGLKSGYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKT-----------LKKNVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 813          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAEQ (Transcription-repair-coupling factor OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mfd PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34
Identity = 89/255 (34.90%), Postives = 137/255 (53.73%), Query Frame = 2
Query:   35 LLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796
            L+D Y++  ++  Y  G  +  +       PY LT  Q  +I EI  D+++  PM+RLL GDVG GKT VA  A  + +  G Q AF+VPT +LA QHYE LL+ + +   +     I L++     K+ R  ++ L++G + +V+GTH L+ + +++  L L IVDE+QRFGV  + R  +              N D            VL ++ATPIPRTL +++ G   L+ I   P  R P++TY++E N
Sbjct:  587 LIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMERARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVE-----IQLVSRFRTAKEIRETKEGLKSGYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKT-----------LKKNVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 813          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAAW (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain MW2) GN=mfd PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34
Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2
Query:   29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796
            E L+D Y++  +   Y  G  +  +       PY LT  Q  +I EI  D+++  PM+RLL GDVG GKT VA  A  + +  G Q AF+VPT +LA QHYE L++ + +   +     I L++     K+ +  ++ L+TG + +V+GTH L+++ +++  L L IVDE+QRFGV  + R  +  +           N D            VL ++ATPIPRTL +++ G   L+ I   P  R P++TY++E N
Sbjct:  584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAAS (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain MSSA476) GN=mfd PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34
Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2
Query:   29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796
            E L+D Y++  +   Y  G  +  +       PY LT  Q  +I EI  D+++  PM+RLL GDVG GKT VA  A  + +  G Q AF+VPT +LA QHYE L++ + +   +     I L++     K+ +  ++ L+TG + +V+GTH L+++ +++  L L IVDE+QRFGV  + R  +  +           N D            VL ++ATPIPRTL +++ G   L+ I   P  R P++TY++E N
Sbjct:  584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAAR (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain MRSA252) GN=mfd PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34
Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2
Query:   29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796
            E L+D Y++  +   Y  G  +  +       PY LT  Q  +I EI  D+++  PM+RLL GDVG GKT VA  A  + +  G Q AF+VPT +LA QHYE L++ + +   +     I L++     K+ +  ++ L+TG + +V+GTH L+++ +++  L L IVDE+QRFGV  + R  +  +           N D            VL ++ATPIPRTL +++ G   L+ I   P  R P++TY++E N
Sbjct:  584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAAN (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain N315) GN=mfd PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34
Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2
Query:   29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796
            E L+D Y++  +   Y  G  +  +       PY LT  Q  +I EI  D+++  PM+RLL GDVG GKT VA  A  + +  G Q AF+VPT +LA QHYE L++ + +   +     I L++     K+ +  ++ L+TG + +V+GTH L+++ +++  L L IVDE+QRFGV  + R  +  +           N D            VL ++ATPIPRTL +++ G   L+ I   P  R P++TY++E N
Sbjct:  584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAAM (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=mfd PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34
Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2
Query:   29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796
            E L+D Y++  +   Y  G  +  +       PY LT  Q  +I EI  D+++  PM+RLL GDVG GKT VA  A  + +  G Q AF+VPT +LA QHYE L++ + +   +     I L++     K+ +  ++ L+TG + +V+GTH L+++ +++  L L IVDE+QRFGV  + R  +  +           N D            VL ++ATPIPRTL +++ G   L+ I   P  R P++TY++E N
Sbjct:  584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAAC (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain COL) GN=mfd PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34
Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2
Query:   29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796
            E L+D Y++  +   Y  G  +  +       PY LT  Q  +I EI  D+++  PM+RLL GDVG GKT VA  A  + +  G Q AF+VPT +LA QHYE L++ + +   +     I L++     K+ +  ++ L+TG + +V+GTH L+++ +++  L L IVDE+QRFGV  + R  +  +           N D            VL ++ATPIPRTL +++ G   L+ I   P  R P++TY++E N
Sbjct:  584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812          
The following BLAST results are available for this feature:
BLAST of EY735821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
RECG_ECO572.809e-3637.45ATP-dependent DNA helicase recG OS=Escherichia col... [more]
RECG_ECOLI8.174e-3637.45ATP-dependent DNA helicase recG OS=Escherichia col... [more]
MFD_STAES2.013e-3434.90Transcription-repair-coupling factor OS=Staphyloco... [more]
MFD_STAEQ2.013e-3434.90Transcription-repair-coupling factor OS=Staphyloco... [more]
MFD_STAAW2.013e-3434.63Transcription-repair-coupling factor OS=Staphyloco... [more]
MFD_STAAS2.013e-3434.63Transcription-repair-coupling factor OS=Staphyloco... [more]
MFD_STAAR2.013e-3434.63Transcription-repair-coupling factor OS=Staphyloco... [more]
MFD_STAAN2.013e-3434.63Transcription-repair-coupling factor OS=Staphyloco... [more]
MFD_STAAM2.013e-3434.63Transcription-repair-coupling factor OS=Staphyloco... [more]
MFD_STAAC2.013e-3434.63Transcription-repair-coupling factor OS=Staphyloco... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-E05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735821 ID=EY735821; Name=EY735821; organism=Citrus sinensis; type=EST; length=864bp
CACGCGTCCGGGTACACAATTTGAGAAAGAGGGATTGCTGGATAAGTACA
GAAAACCTAGATTAAATGCTGCATATATGGAGGGATGGTCCAGTCTGACC
AAGAAACTTTTAAGAGCTCTTCCTTATTCCCTTACGTCTAGTCAGCTAAG
TGCCATTTCAGAAATTATATGGGATCTCAAGCAACCAGTTCCTATGAATC
GGCTTTTGCAGGGTGATGTTGGATGTGGTAAAACTGTGGTAGCTTTTTTG
GCTTGCATGGAGGTTATAGGCTCTGGTTATCAGGCAGCTTTTATGGTTCC
AACTGAGTTGCTTGCAACCCAGCACTATGAGCACTTGCTTAAATTGCTAG
ATAATATGGAGGAGGACAAGCACAAACCTAAAATTGCCTTACTAACAGGT
TCAACACCAGTAAAACAATCCCGGATGATCCGTAAGGATCTTCAAACTGG
AGATATCACTCTGGTCATTGGAACCCATAGTTTAATTGCTGAAAAAGTTG
AATTTTCTGCTTTACGCCTCGCTATTGTGGATGAACAACAACGCTTTGGT
GTGGTACAGAGAGGCAGATTTAACAGTAAGTTATATTATACCTCCATGAG
TTCAGGTATGGCAATGGTTAATTCAGACGGGTCTCCAAAAGATGATCAAC
ATATGGCTCCTCATGTTCTTGCCATGTCAGCCACTCCTATCCCAAGAACG
CTTGCTTTGGCATTATATGGGGATATGTCCCTTACACAGATAACTGACTT
ACCTCCCAGAAGGATACCTATTAAGACCTACATCATTGAAGGAAATGAGA
AGGGCTATGAGAATGTGTACAAGATGATGCTTGACGAACTGNCATCAGGT
GGAAAATGTCCCTT
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