EY735821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAAB (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=mfd PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34 Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2 Query: 29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796 E L+D Y++ + Y G + + PY LT Q +I EI D+++ PM+RLL GDVG GKT VA A + + G Q AF+VPT +LA QHYE L++ + + + I L++ K+ + ++ L+TG + +V+GTH L+++ +++ L L IVDE+QRFGV + R + + N D VL ++ATPIPRTL +++ G L+ I P R P++TY++E N Sbjct: 584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAA8 (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain NCTC 8325) GN=mfd PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34 Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2 Query: 29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796 E L+D Y++ + Y G + + PY LT Q +I EI D+++ PM+RLL GDVG GKT VA A + + G Q AF+VPT +LA QHYE L++ + + + I L++ K+ + ++ L+TG + +V+GTH L+++ +++ L L IVDE+QRFGV + R + + N D VL ++ATPIPRTL +++ G L+ I P R P++TY++E N Sbjct: 584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAA3 (Transcription-repair-coupling factor OS=Staphylococcus aureus (strain USA300) GN=mfd PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34 Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = 2 Query: 29 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796 E L+D Y++ + Y G + + PY LT Q +I EI D+++ PM+RLL GDVG GKT VA A + + G Q AF+VPT +LA QHYE L++ + + + I L++ K+ + ++ L+TG + +V+GTH L+++ +++ L L IVDE+QRFGV + R + + N D VL ++ATPIPRTL +++ G L+ I P R P++TY++E N Sbjct: 584 EELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVE-----IQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKH-----------NVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 812
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAHJ (Transcription-repair-coupling factor OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mfd PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.959e-33 Identity = 86/255 (33.73%), Postives = 135/255 (52.94%), Query Frame = 2 Query: 35 LLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796 L+ Y++ ++ Y G + + PY LT Q +I EI D+++ PM+RLL GDVG GKT VA A + + G Q AF+VPT +LA QHYE L++ + + +I L++ K+ + ++ L++G + +V+GTH L+ + + + L L IVDE+QRFGV + R + N D VL ++ATPIPRTL +++ G L+ I P R P++TY++E N Sbjct: 587 LIALYKEREMSVGYQYGEDTAEQSAFEMDFPYELTPDQAKSIDEIKGDMERERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDF-----PVQIELISRFRSTKEVKETKEGLKSGYVDIVVGTHKLLGKDIHYKDLGLLIVDEEQRFGVRHKERIKT-----------MKTNVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 813
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_STAS1 (Transcription-repair-coupling factor OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=mfd PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.198e-32 Identity = 86/255 (33.73%), Postives = 135/255 (52.94%), Query Frame = 2 Query: 35 LLDKYRKPRLNAAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796 L++ Y+ ++ Y G + + PY LT Q +I EI D++ PM+RLL GDVG GKT VA A + + G Q AF+VPT +LA QHYE L++ + + + + L++ K+ + ++ L++G + +V+GTH L+ + +++ L L IVDE+QRFGV + R S N D VL ++ATPIPRTL +++ G L+ I P R P++TY++E N Sbjct: 588 LIELYKAREMSVGYKFGPDTAEQNDFEIDFPYELTPDQSKSIEEIKQDMEIERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPIE-----VQLISRFRTTKEVKETKEGLKSGFVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKS-----------LKNNVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQN 814
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_BACSU (Transcription-repair-coupling factor OS=Bacillus subtilis GN=mfd PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.352e-32 Identity = 85/227 (37.44%), Postives = 121/227 (53.30%), Query Frame = 2 Query: 116 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGN 796 A PY T QL +I EI D+++ PM+RLL GDVG GKT VA A + IG G Q A +VPT +LA QHYE + + + + I LL+ K++ K L+ G + +VIGTH L+++ V + L L I+DE+QRFGV + + N D VL ++ATPIPRTL +++ G L+ I P R P++TY++E N Sbjct: 619 AFPYQETEDQLRSIHEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTTILAQQHYETIKERFQD-----YPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIK-----------QIKANVD------------VLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYN 817
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_HAEIN (Transcription-repair-coupling factor OS=Haemophilus influenzae GN=mfd PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.816e-28 Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 2 Query: 122 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEKGYENVYKMMLDELXSGGK 856 P+ T Q AI+ +I D+ QP M+RL+ GDVG GKT VA A + + Q A +VPT LLA QHYE+ N+ + + +L+ K+ + I ++L G + ++IGTH LI V+F+ L L I+DE+ RFGV Q+ + N D +L ++ATPIPRTL +A+ G L+ I+ P RR+ IKT++ + ++ V + +L E+ GG+ Sbjct: 600 PFEETYDQEMAINAVISDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPTTLLAQQHYENFKDRFANLPVN-----VEVLSRFKTAKEQKQILENLAEGKVDILIGTHKLIQSDVKFNDLGLLIIDEEHRFGVGQKEKIK-----------QLRANID------------ILTLTATPIPRTLNMAMNGIRDLSIISTPPARRLSIKTFVRQNDDL---VVREAILREILRGGQ 813
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_ECOLI (Transcription-repair-coupling factor OS=Escherichia coli (strain K12) GN=mfd PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.397e-27 Identity = 83/249 (33.33%), Postives = 127/249 (51.00%), Query Frame = 2 Query: 116 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEKGYEN--VYKMMLDELXSGGK 856 + P+ T Q AI+ ++ D+ QP+ M+RL+ GDVG GKT VA A + + Q A +VPT LLA QHY++ N +I +++ K+ I ++ G I ++IGTH L+ V+F L L IVDE+ RFGV + R + N D +L ++ATPIPRTL +A+ G L+ I P RR+ +KT++ E Y++ V + +L E+ GG+ Sbjct: 596 SFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANW-----PVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKA-----------MRANVD------------ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVRE-----YDSMVVREAILREILRGGQ 811
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_RICFE (Transcription-repair-coupling factor OS=Rickettsia felis GN=mfd PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.825e-27 Identity = 82/232 (35.34%), Postives = 125/232 (53.88%), Query Frame = 2 Query: 104 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY----QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYII 787 K P+S T QL+AI++I DL+ + M+RL+ GDVG GKT VA A V S Q A +VPT +L +QH+ ++ + I L+ K++++IR +L++G I ++IGTHSL+ + +F L+L I+DE+Q FGV Q K + S+ S + HVLAMSATPIPRTL +++ G L+ I P R+ ++T ++ Sbjct: 569 KFCANFPFSETEDQLTAINDIKEDLRNGMLMDRLICGDVGFGKTEVAMRAVFMVAKSLNEHLPQVAVVVPTTILCSQHFSRFIERFKGFGLN-----IKQLSSVISAKEAKIIRSELESGKINIIIGTHSLLHKNTKFFNLKLLIIDEEQHFGVGQ------KEFLKSLKS-----------------SSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVRTMVM 772
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: MFD_MYCTU (Transcription-repair-coupling factor OS=Mycobacterium tuberculosis GN=mfd PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.113e-27 Identity = 78/229 (34.06%), Postives = 115/229 (50.22%), Query Frame = 2 Query: 116 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEK 802 A ++ T QL+AI E+ D+++P+PM+R++ GDVG GKT +A A + + G Q A +VPT LLA QH + + + I L+ T +SR + L G + +VIGTH L+ V + L L +VDE+QRFGV + S + VL MSATPIPRTL ++L G ++ I P R P+ TY+ ++K Sbjct: 644 AFGFTETVDQLTAIEEVKADMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFGERMSGF-----PVTIKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRTHVD-----------------------VLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDK 844 The following BLAST results are available for this feature:
BLAST of EY735821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735821 ID=EY735821; Name=EY735821; organism=Citrus sinensis; type=EST; length=864bpback to top |