EY735768

Overview
NameEY735768
Unique NameEY735768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15_CHICK (60S ribosomal protein L15 (Fragment) OS=Gallus gallus GN=RPL15 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41
Identity = 85/155 (54.84%), Postives = 95/155 (61.29%), Query Frame = 3
Query:  171 RPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRANWEEK 635
            RPTRPDKARRLGYKAKQ                       YGKP + GV QLKF RS +SVAEERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H  IR +P   W+  PVHKHRE+RGLTSAG+K                SRRA W  +
Sbjct:    2 RPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKRIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRR 156          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15_PIG (60S ribosomal protein L15 (Fragment) OS=Sus scrofa GN=RPL15 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.084e-34
Identity = 74/144 (51.39%), Postives = 84/144 (58.33%), Query Frame = 3
Query:  204 GYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRANWEEK 635
            GYKAKQ                       YGKP + GV QLKF RS +SV EERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P   W+  PVHKHRE+RGLTSAG+K                SRRA W  +
Sbjct:    1 GYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVXEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRR 144          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15_QUESU (60S ribosomal protein L15 OS=Quercus suber GN=RPL15 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.722e-34
Identity = 72/123 (58.54%), Postives = 84/123 (68.29%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINE 419
            MGAY +V+E+ R+KQSDV+RFL RVRCWEYRQ   I R +RP+RPDKARRLGYKAKQ                       +GKP NQG+ QLKFQRS RS AEER  R+ GGLR+LNSYWI +
Sbjct:    1 MGAYKYVAEMERRKQSDVLRFLLRVRCWEYRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRVRVRRGNRKRPAPKGATFGKPVNQGINQLKFQRSLRSTAEERVARRCGGLRILNSYWITK 123          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METJA (50S ribosomal protein L15e OS=Methanocaldococcus jannaschii GN=rpl15e PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.642e-34
Identity = 77/191 (40.31%), Postives = 105/191 (54.97%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            MG Y ++ E W++ +   +R L   R  ++R+ P++VR+ RPTR D+AR LGYK KQ                         KP   GV ++   +S + +AEERA RK   + VLNSYW+ ED  +K++EVILVDP H AI+ DP++NWLC   H+ R  RGLTSAGKK               PS RA+
Sbjct:    1 MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSK--KPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAEKVRPSIRAH 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.009e-33
Identity = 75/191 (39.27%), Postives = 101/191 (52.88%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            M  Y +V E W+   +  ++ LQ  R  ++R+ PS++R+ RPTR D+AR LGYKAKQ                         KP   G+ ++   +S + +AEERA +K   + VLNSYW+ +D   K++EVILVDP   +I+ND   NWLC   HK R  RGLTSAGKK               PS RAN
Sbjct:    1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVILVDPCQPSIKNDKSYNWLCKGTHKGRVTRGLTSAGKKGRGLMYKGKGAEKARPSVRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METM7 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.755e-33
Identity = 76/191 (39.79%), Postives = 102/191 (53.40%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            M  Y +V E W+   +  ++ LQ  R  ++R+ PS++RV RPTR D+AR LGYKAKQ                         KP+  G+ ++   +S + +AEERA +K   L VLNSYW+ +D   K++EVILVD  H +I++D   NWLC   HK R  RGLTSAGKK               PS RAN
Sbjct:    1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGTEKVRPSVRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.755e-33
Identity = 76/191 (39.79%), Postives = 102/191 (53.40%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            M  Y +V E W+   +  ++ LQ  R  ++R+ PS++RV RPTR D+AR LGYKAKQ                         KP+  G+ ++   +S + +AEERA +K   L VLNSYW+ +D   K++EVILVD  H +I++D   NWLC   HK R  RGLTSAGKK               PS RAN
Sbjct:    1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGAEKVRPSVRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_STAMF (50S ribosomal protein L15e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.950e-32
Identity = 73/169 (43.20%), Postives = 97/169 (57.40%), Query Frame = 3
Query:   54 GAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            G Y ++++LW++     M  L R R  ++R+ P+I+R+ +PTR D+AR LGYKAKQ                         +P   G+      +S R +AEERA RK   L VLNSY++ ED  YK++EVILVDP H AI NDP I W+C   H+ R  RGLTSAGKK
Sbjct:    4 GMYHYIAQLWKRPYEGDMLTLMRQRLIKWRREPAIIRIEKPTRLDRARALGYKAKQGFIIVRVRVRKGGLRKQRPNK--GRRPKRMGIYGFAPSKSLRLIAEERAARKYPNLEVLNSYYVGEDGNYKWYEVILVDPHHPAICNDPDIKWICEKQHRRRVFRGLTSAGKK 170          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_THEON (50S ribosomal protein L15e OS=Thermococcus onnurineus (strain NA1) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.547e-32
Identity = 75/191 (39.27%), Postives = 103/191 (53.93%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            MG Y ++ E W+  +   +  L + R  ++R+ P +VRV RPTR D+AR LGY+AKQ                         KP+  G+ +   ++S + +AEE+A RK   L VLNSYW+ ED  YK+FEVI+VDP H  I++DP+I W+    HK R  RGLTSAG+K               PS RAN
Sbjct:    1 MGMYKYIREAWKSPKKSYVGQLLKKRMIKWRREPVVVRVERPTRLDRARSLGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGRKSRGLRNKGKGAEKVRPSVRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_THEGJ (50S ribosomal protein L15e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.547e-32
Identity = 75/191 (39.27%), Postives = 103/191 (53.93%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            MG Y ++ E W+  +   +  L + R  ++R+ P +VR+ RPTR D+AR LGY+AKQ                         KP+  G+ +   ++S + +AEE+A RK   L VLNSYW+ ED  YK+FEVI+VDP H  I++DP+I W+    HK R  RGLTSAGKK               PS RAN
Sbjct:    1 MGMYKYIREAWKSPKKSYVGELLKKRMIKWRREPVVVRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWITGKAHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSVRAN 189          
The following BLAST results are available for this feature:
BLAST of EY735768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_CHICK3.921e-4154.8460S ribosomal protein L15 (Fragment) OS=Gallus gal... [more]
RL15_PIG2.084e-3451.3960S ribosomal protein L15 (Fragment) OS=Sus scrofa... [more]
RL15_QUESU2.722e-3458.5460S ribosomal protein L15 OS=Quercus suber GN=RPL1... [more]
RL15E_METJA4.642e-3440.3150S ribosomal protein L15e OS=Methanocaldococcus j... [more]
RL15E_METM53.009e-3339.2750S ribosomal protein L15e OS=Methanococcus maripa... [more]
RL15E_METM78.755e-3339.7950S ribosomal protein L15e OS=Methanococcus maripa... [more]
RL15E_METM68.755e-3339.7950S ribosomal protein L15e OS=Methanococcus maripa... [more]
RL15E_STAMF1.950e-3243.2050S ribosomal protein L15e OS=Staphylothermus mari... [more]
RL15E_THEON2.547e-3239.2750S ribosomal protein L15e OS=Thermococcus onnurin... [more]
RL15E_THEGJ2.547e-3239.2750S ribosomal protein L15e OS=Thermococcus gammato... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-H01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735768 ID=EY735768; Name=EY735768; organism=Citrus sinensis; type=EST; length=881bp
CCACGCGTCCGCGGATACTGCGCAGCTCAGCTCAGCTCAGCTCAGAGCCA
ATGGGGGCTTACACGTTCGTGTCGGAGCTATGGAGGAAGAAGCAGTCAGA
TGTGATGAGGTTCTTGCAGAGGGTGAGGTGTTGGGAGTACCGCCAACATC
CATCTATTGTTAGGGTCACCCGTCCCACTCGACCTGACAAGGCTCGACGC
TTGGGTTACAAGGCCAAGCAGGGTTATGTTGTTTATCGTGTGCGGGTAAG
GCGTGGTGGTCGGAAGAGGCCTGTTCCCAAGGGCATTGTGTATGGTAAAC
CCACAAACCAGGGTGTTACTCAACTGAAGTTTCAGCGCAGCAAGAGGTCT
GTTGCAGAGGAGCGTGCCGGTCGTAAGTTGGGAGGTCTTAGGGTTCTCAA
TTCTTACTGGATCAATGAGGACTCCACTTATAAGTACTTTGAGGTGATCT
TGGTTGATCCTGCTCATAATGCCATCCGAAATGACCCAAGAATTAATTGG
TTATGCAATCCTGTCCATAAGCACAGGGAACTCCGTGGTCTTACTTCTGC
AGGTAAGAAGTACAGAGGCCTACGTGGAAAAGGACACTTGCACCACAGAG
GTCGGCCTTCGCGCAGGGCTAACTGGGAAGAGAAACAATACTCTTTCCCT
CCCGTCTCTACCGTTGGAATCATTGTATGGGTTTTGATGGTTTATCATCC
GGTGGAGGGATTTGGGCTGGAGGAACATGTTAGTTGCCATTTTGAGTGCT
TGAAACAATCGCAATTATTGGGGAAGATATTTGAAGTGTGAACCGTTGCG
TTCTAAATTACGAGAATGTGGTGTCTGGGTCTCGTCCGTGGAGTGTGTGA
AGCCTTCGATTTTTTGCAGCCCACACAAGCC
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