EY735768

Overview
NameEY735768
Unique NameEY735768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_PYRHO (50S ribosomal protein L15e OS=Pyrococcus horikoshii GN=rpl15e PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 4.345e-32
Identity = 76/191 (39.79%), Postives = 103/191 (53.93%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            MG Y ++ E W+  +   +  L + R  ++R+ PS+VR+ RPTR D+AR LGY+AKQ                         KP+  G  +   ++S + +AEE+A RK   L VLNSYW+ ED  YK+FEVI+VDP H  I++DP+I W+    HK R  RGLTSAGKK               PS RAN
Sbjct:    1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGYIIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAB (50S ribosomal protein L15e OS=Pyrococcus abyssi GN=rpl15e PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.680e-32
Identity = 75/191 (39.27%), Postives = 103/191 (53.93%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            MG Y ++ E W+  +   +  L + R  ++R+ P++VR+ RPTR D+AR LGY+AKQ                         KP+  G  +   ++S + +AEE+A RK   L VLNSYW+ ED  YK+FEVI+VDP H  I++DP+I W+    HK R  RGLTSAGKK               PS RAN
Sbjct:    1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPAVVRIERPTRLDRARALGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_DESK1 (50S ribosomal protein L15e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.264e-31
Identity = 75/167 (44.91%), Postives = 99/167 (59.28%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            Y +++E W++K  + +  L R R  E+R+ PS+VR+ +PTR DKAR LGYKAK                          +P   GV      +S R +AEERA RK  GL VLNSY++ ED  YK++EVILVDP H +I NDP +NW+C P ++ R  RGLTSAGKK
Sbjct:    6 YHYIAEAWKEKSRE-LEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDS--GRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKK 169          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_PYRFU (50S ribosomal protein L15e OS=Pyrococcus furiosus GN=rpl15e PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.156e-31
Identity = 75/191 (39.27%), Postives = 102/191 (53.40%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            MG Y ++ E W+  +   +  L + R  ++R+ P +VR+ RPTR D+AR LGY+AKQ                         KP+  G  +   ++S + +AEE+A RK   L VLNSYW+ ED  YK+FEVI+VDP H  I++DP+I W+    HK R  RGLTSAGKK               PS RAN
Sbjct:    1 MGMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSIRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_PYRKO (50S ribosomal protein L15e OS=Pyrococcus kodakaraensis GN=rpl15e PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.274e-31
Identity = 72/191 (37.70%), Postives = 102/191 (53.40%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            MG Y ++ E W+  +   +  L + R  ++R+ P + R+ RPTR D+AR LGY+AKQ                         KP+  G+ +   ++S + +AEE+A RK   L VLNSYW+ ED  YK+FEVI+VDP H  I++DP+I W+    HK R  RGLTSAGK+               PS RA+
Sbjct:    1 MGMYKYIREAWKSPKKSYVGELLKKRMIQWRRDPVVKRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGKRSRGLLNKGKGAEKVRPSIRAH 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_AERPE (50S ribosomal protein L15e OS=Aeropyrum pernix GN=rpl15e PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.274e-31
Identity = 74/170 (43.53%), Postives = 96/170 (56.47%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            +  Y +++  W+K    +   L + R  E+R+ PSI+RV +PTR D+AR LGYKAKQ                         +P   GV      +S R +AEERA RK   L VLNSY++ ED  YK++EVILVDP H AI+NDP +NW+    HK R  RGLTSAGKK
Sbjct:    3 LSMYHYIAREWKKPYEGLHGELMKARLLEWRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNK--GRRPKRMGVYGFAPAKSLRLIAEERAQRKYPNLVVLNSYYVGEDGRYKWYEVILVDPNHPAIKNDPELNWVTTGKHKGRPFRGLTSAGKK 170          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.398e-30
Identity = 71/191 (37.17%), Postives = 100/191 (52.36%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            M  Y +V E W+   +  ++ LQ  R  ++R+ PS++R+ RPTR D+AR LGYKAKQ                         KP   G+ ++   +S + +AEERA ++   + VLNSYW+ +D   K++E+ILVDP H +I+ND   +WL    HK R  RGLTSAGKK               P  RAN
Sbjct:    1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAEKARPGVRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3)

HSP 1 Score: 129.798 bits (325), Expect = 2.018e-29
Identity = 68/167 (40.72%), Postives = 93/167 (55.69%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            Y +V + W+  +   +R L   R  ++R+ P I R+ RPTR D+AR LGY+AK                          +PT  GV ++   +S + +AEER  RK   + VLNSYW+ ED  YK++EVILVDP H AI+NDP+I W+C   H+ R  RGL S GKK
Sbjct:    3 YRYVKDAWKNPKDSYVRELMWERAPKWRRDPVIKRIERPTRIDRARALGYRAKPGYIVVRTRVRRGSQRKTRFK--AGRRPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPKIYWICVKQHRGRVFRGLISEGKK 167          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METST (50S ribosomal protein L15e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.018e-29
Identity = 69/168 (41.07%), Postives = 96/168 (57.14%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            Y ++ E W+      ++ L R R  ++R+ P I+R+ +PTR D+ARRLGYKAK                         G+ P   GV ++  ++S + +AEER  RK   L VLNSYW+ ED   KY+EVILVDP   +I++D +INW+C+  H  R  RGLTSAGKK
Sbjct:    7 YKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFKN---GRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRRAFRGLTSAGKK 171          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_NATPD (50S ribosomal protein L15e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.636e-29
Identity = 73/188 (38.83%), Postives = 101/188 (53.72%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            Y+ + E W+  +   +  LQ  R  E+R   +I R+ RPTR DKAR LGYKAKQ                         K   QGV ++  +++ + +AEER+GRK   LRVLNSYW+ ED + K+FEVIL+DP H AI+ND  ++W+C+   + R  RG TSAG++               PS RAN
Sbjct:    6 YSHIREAWKTPKEGKLAELQWQRQQEWRDQGAIERIERPTRLDKARSLGYKAKQGVVVARVSVRKGTARKQRFKAGRRSK--RQGVNKITRRKNLQRIAEERSGRKFRNLRVLNSYWVGEDGSQKWFEVILLDPEHGAIQNDDDLSWICDDSQRGRAYRGRTSAGQRGRGQQKRGKGTEHTRPSIRAN 191          
The following BLAST results are available for this feature:
BLAST of EY735768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15E_PYRHO4.345e-3239.7950S ribosomal protein L15e OS=Pyrococcus horikoshi... [more]
RL15E_PYRAB9.680e-3239.2750S ribosomal protein L15e OS=Pyrococcus abyssi GN... [more]
RL15E_DESK11.264e-3144.9150S ribosomal protein L15e OS=Desulfurococcus kamc... [more]
RL15E_PYRFU2.156e-3139.2750S ribosomal protein L15e OS=Pyrococcus furiosus ... [more]
RL15E_PYRKO6.274e-3137.7050S ribosomal protein L15e OS=Pyrococcus kodakarae... [more]
RL15E_AERPE6.274e-3143.5350S ribosomal protein L15e OS=Aeropyrum pernix GN=... [more]
RL15E_METMP1.398e-3037.1750S ribosomal protein L15e OS=Methanococcus maripa... [more]
RL15E_METTH2.018e-2940.7250S ribosomal protein L15e OS=Methanobacterium the... [more]
RL15E_METST2.018e-2941.0750S ribosomal protein L15e OS=Methanosphaera stadt... [more]
RL15E_NATPD2.636e-2938.8350S ribosomal protein L15e OS=Natronomonas pharaon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-H01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735768 ID=EY735768; Name=EY735768; organism=Citrus sinensis; type=EST; length=881bp
CCACGCGTCCGCGGATACTGCGCAGCTCAGCTCAGCTCAGCTCAGAGCCA
ATGGGGGCTTACACGTTCGTGTCGGAGCTATGGAGGAAGAAGCAGTCAGA
TGTGATGAGGTTCTTGCAGAGGGTGAGGTGTTGGGAGTACCGCCAACATC
CATCTATTGTTAGGGTCACCCGTCCCACTCGACCTGACAAGGCTCGACGC
TTGGGTTACAAGGCCAAGCAGGGTTATGTTGTTTATCGTGTGCGGGTAAG
GCGTGGTGGTCGGAAGAGGCCTGTTCCCAAGGGCATTGTGTATGGTAAAC
CCACAAACCAGGGTGTTACTCAACTGAAGTTTCAGCGCAGCAAGAGGTCT
GTTGCAGAGGAGCGTGCCGGTCGTAAGTTGGGAGGTCTTAGGGTTCTCAA
TTCTTACTGGATCAATGAGGACTCCACTTATAAGTACTTTGAGGTGATCT
TGGTTGATCCTGCTCATAATGCCATCCGAAATGACCCAAGAATTAATTGG
TTATGCAATCCTGTCCATAAGCACAGGGAACTCCGTGGTCTTACTTCTGC
AGGTAAGAAGTACAGAGGCCTACGTGGAAAAGGACACTTGCACCACAGAG
GTCGGCCTTCGCGCAGGGCTAACTGGGAAGAGAAACAATACTCTTTCCCT
CCCGTCTCTACCGTTGGAATCATTGTATGGGTTTTGATGGTTTATCATCC
GGTGGAGGGATTTGGGCTGGAGGAACATGTTAGTTGCCATTTTGAGTGCT
TGAAACAATCGCAATTATTGGGGAAGATATTTGAAGTGTGAACCGTTGCG
TTCTAAATTACGAGAATGTGGTGTCTGGGTCTCGTCCGTGGAGTGTGTGA
AGCCTTCGATTTTTTGCAGCCCACACAAGCC
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