EY735768

Overview
NameEY735768
Unique NameEY735768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_HALSA (50S ribosomal protein L15e OS=Halobacterium salinarium GN=rpl15e PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.443e-29
Identity = 74/193 (38.34%), Postives = 100/193 (51.81%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRANWEEK 635
            Y+ + E W       +  LQ  R  ++R+  +I RV RPTR DKAR LGYKAKQ                        G+ T  QGV ++   ++ + +AEERA RK   LR LNSYW+ ED + K+FE IL+DP H AI+ND  +NW+C+  HK+R  RG TSAG++               PS  A+   K
Sbjct:    6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNADKRNK 195          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_HALS3 (50S ribosomal protein L15e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.443e-29
Identity = 74/193 (38.34%), Postives = 100/193 (51.81%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRANWEEK 635
            Y+ + E W       +  LQ  R  ++R+  +I RV RPTR DKAR LGYKAKQ                        G+ T  QGV ++   ++ + +AEERA RK   LR LNSYW+ ED + K+FE IL+DP H AI+ND  +NW+C+  HK+R  RG TSAG++               PS  A+   K
Sbjct:    6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNADKRNK 195          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_HALWD (50S ribosomal protein L15e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.873e-29
Identity = 70/166 (42.17%), Postives = 92/166 (55.42%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGK 557
            Y+ + E W++     +  LQ  R  E+R   +IVR+ RPTR DKAR LGYKAKQ                         K   QGV +L  + S + +AEERA RK   LR L SYW+ ED + K+ E+IL+DP H AI ND  +NW+C+  HK R  RGLT+AG+
Sbjct:    6 YSHIKEAWKQPGDGKLAELQWQRKQEWRDQGAIVRIDRPTRLDKARELGYKAKQGVIIARVAVRKGGARKKRFTSGRRSK--RQGVNRLGRRTSIQRIAEERAARKYPNLRTLASYWVGEDGSQKWHEIILIDPEHAAIENDDDLNWICDDTHKGRAFRGLTNAGR 169          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_HALLT (50S ribosomal protein L15e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.873e-29
Identity = 73/167 (43.71%), Postives = 92/167 (55.09%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            Y+ + E WR  +   +  LQ  R  E+R   +I R+ RPTR DKAR LGYKAKQ                         K   QGV +L  ++S + ++EERA RK   LRVLNSYW+ ED + K+ EVILVDP H AI ND  + W+ +  HK R  RGLTSAG K
Sbjct:    6 YSHIKEAWRSPKEGKLAELQWQRKQEWRDEGAIERIERPTRLDKARELGYKAKQGVVVARVSVRKGGSRKQRHKAGRRSK--RQGVNRLSRRKSIQRISEERASRKYRNLRVLNSYWVGEDGSQKWHEVILVDPNHPAIENDGDLGWIASDDHKGRAFRGLTSAGTK 170          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METKA (50S ribosomal protein L15e OS=Methanopyrus kandleri GN=rpl15e PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.002e-28
Identity = 71/193 (36.79%), Postives = 99/193 (51.30%), Query Frame = 3
Query:   45 EPMGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            + +  Y +  E W++ +   +  L + R  ++R+ PS+ R+ RPTR ++ARRLGY+AK                          +P   G  +    +SK+ +AEERA RK   L VLNSYW+ ED  YKY+EVI+VDP H  I++D RINW+C    K R  RG T AGKK               PS RA+
Sbjct:    2 DAVSMYKYQREAWKRPKDSYVGELLKERLPKWRKGPSVQRIKRPTRIERARRLGYRAKPGYVVVRVRVPKGGRRKSRPKK--GRRPKRMGKNKFSPGKSKQWIAEERAQRKYPNLEVLNSYWVGEDGQYKYYEVIMVDPYHPQIKSDHRINWICQKSQKGRVFRGKTGAGKKARGLRKRGKGAEKVRPSLRAH 192          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METHJ (50S ribosomal protein L15e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.446e-27
Identity = 75/189 (39.68%), Postives = 98/189 (51.85%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPT-NQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            Y +V + W+      ++ L   R  ++R+  SIVRV RPTR D+AR LGYKAKQ                      V G+ T   GV +    +S + +AEERA RK   + VLNSYW+ ED   K++EVIL+DP H +I ND  +NW+  P H+ R  RGLTSAG K               PS RAN
Sbjct:    6 YAYVRDAWKIPDDTGVKALLWERMQDWRREGSIVRVRRPTRIDRARALGYKAKQGIVVVRVKVRRGGRRASRY---VRGRRTARMGVNRKTMGKSIQRIAEERACRKYPNMEVLNSYWVGEDGRQKWYEVILLDPHHPSIINDKTLNWISKPGHRGRSERGLTSAGVKGRGMRRRGKGTEKCRPSVRAN 191          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METBU (50S ribosomal protein L15e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27
Identity = 68/189 (35.98%), Postives = 97/189 (51.32%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            Y ++ + W+      +R L+  R   +R+  S+ RV RPTR D+AR LGYKAKQ                      + G+ T   G  ++   +S + ++EERA RK   + VLNSYW+ ED   K++EVILVDP+H  I++D  +NW+C   H  R  RG TSAG+K               PS R+N
Sbjct:    6 YGYIRDAWKNPDETYVRDLRWERLQVWRKEGSVTRVERPTRIDRARSLGYKAKQGIVVARVKVRRGSMRKSRY---IRGRRTQHTGKNKITVGKSIQRISEERAARKYPNMEVLNSYWVGEDGKQKWYEVILVDPSHPVIKSDKNLNWICGKAHSGRVFRGKTSAGRKGRGMQTRGTGTEKTRPSVRSN 191          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_SULTO (50S ribosomal protein L15e OS=Sulfolobus tokodaii GN=rpl15e PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27
Identity = 64/167 (38.32%), Postives = 93/167 (55.69%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            Y ++ + W   QSD  + + R R  E+R+ P++ R+ +PTR ++AR +GYKAKQ                         +P   GV      +  R +AEE+A RK   L VL SY++ ED  YKY+E+I+VDP H  I++DP + WL +P ++ R  RGLTSAGKK
Sbjct:    6 YNYIEQTW---QSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVVVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGLTSAGKK 167          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_META3 (50S ribosomal protein L15e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27
Identity = 70/191 (36.65%), Postives = 95/191 (49.74%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            M  Y  V E W+K     ++ LQ  R  ++R+ P++VRV +PTR D+AR LGYKAKQ                         KP    + ++   +S + +AEERA ++   L VLNSY + ED   K++EVIL+D  H +I+ND     LC   H +R  RGLTSAGKK               P  RAN
Sbjct:    1 MSMYKHVKEAWKKPSESYVKGLQWARMQDWRKEPTVVRVEKPTRIDRARSLGYKAKQGVIVARVAVRRGGLRKPRPKHSK--KPATMAMNKITMSKSIQRIAEERAAKRYPNLEVLNSYSVGEDGKRKWYEVILIDVNHPSIKNDSSYKNLCTGKHTNRVFRGLTSAGKKGRGLMNKGKGAEKVRPGIRAN 189          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_SULIY (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26
Identity = 66/170 (38.82%), Postives = 94/170 (55.29%), Query Frame = 3
Query:   51 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            +  Y ++   W  ++    + + R R  E+R+ PSIVR+ +PTR ++AR LGYKAKQ                         +P   GV      +  + +AEERA RK   L VL SY++ ED  YKY+E+I+VDP+H  I+NDP   WL +P +++R  RGLTSAGKK
Sbjct:    3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKK 168          
The following BLAST results are available for this feature:
BLAST of EY735768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15E_HALSA3.443e-2938.3450S ribosomal protein L15e OS=Halobacterium salina... [more]
RL15E_HALS33.443e-2938.3450S ribosomal protein L15e OS=Halobacterium salina... [more]
RL15E_HALWD5.873e-2942.1750S ribosomal protein L15e OS=Haloquadratum walsby... [more]
RL15E_HALLT5.873e-2943.7150S ribosomal protein L15e OS=Halorubrum lacusprof... [more]
RL15E_METKA1.002e-2836.7950S ribosomal protein L15e OS=Methanopyrus kandler... [more]
RL15E_METHJ1.446e-2739.6850S ribosomal protein L15e OS=Methanospirillum hun... [more]
RL15E_METBU1.889e-2735.9850S ribosomal protein L15e OS=Methanococcoides bur... [more]
RL15E_SULTO9.376e-2738.3250S ribosomal protein L15e OS=Sulfolobus tokodaii ... [more]
RL15E_META39.376e-2736.6550S ribosomal protein L15e OS=Methanococcus aeolic... [more]
RL15E_SULIY1.225e-2638.8250S ribosomal protein L15e OS=Sulfolobus islandicu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-H01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735768 ID=EY735768; Name=EY735768; organism=Citrus sinensis; type=EST; length=881bp
CCACGCGTCCGCGGATACTGCGCAGCTCAGCTCAGCTCAGCTCAGAGCCA
ATGGGGGCTTACACGTTCGTGTCGGAGCTATGGAGGAAGAAGCAGTCAGA
TGTGATGAGGTTCTTGCAGAGGGTGAGGTGTTGGGAGTACCGCCAACATC
CATCTATTGTTAGGGTCACCCGTCCCACTCGACCTGACAAGGCTCGACGC
TTGGGTTACAAGGCCAAGCAGGGTTATGTTGTTTATCGTGTGCGGGTAAG
GCGTGGTGGTCGGAAGAGGCCTGTTCCCAAGGGCATTGTGTATGGTAAAC
CCACAAACCAGGGTGTTACTCAACTGAAGTTTCAGCGCAGCAAGAGGTCT
GTTGCAGAGGAGCGTGCCGGTCGTAAGTTGGGAGGTCTTAGGGTTCTCAA
TTCTTACTGGATCAATGAGGACTCCACTTATAAGTACTTTGAGGTGATCT
TGGTTGATCCTGCTCATAATGCCATCCGAAATGACCCAAGAATTAATTGG
TTATGCAATCCTGTCCATAAGCACAGGGAACTCCGTGGTCTTACTTCTGC
AGGTAAGAAGTACAGAGGCCTACGTGGAAAAGGACACTTGCACCACAGAG
GTCGGCCTTCGCGCAGGGCTAACTGGGAAGAGAAACAATACTCTTTCCCT
CCCGTCTCTACCGTTGGAATCATTGTATGGGTTTTGATGGTTTATCATCC
GGTGGAGGGATTTGGGCTGGAGGAACATGTTAGTTGCCATTTTGAGTGCT
TGAAACAATCGCAATTATTGGGGAAGATATTTGAAGTGTGAACCGTTGCG
TTCTAAATTACGAGAATGTGGTGTCTGGGTCTCGTCCGTGGAGTGTGTGA
AGCCTTCGATTTTTTGCAGCCCACACAAGCC
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