EY735768

Overview
NameEY735768
Unique NameEY735768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_UNCMA (50S ribosomal protein L15e OS=Uncultured methanogenic archaeon RC-I GN=rpl15e PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.937e-26
Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 3
Query:   57 AYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            AY+++ + W+      +  L   R  E+R+ P++V++ RPTR D+AR LGYKAKQ                         K  + G+  L  + S + +AE RA RK   + VLNSYW+ +D  +K++E+ILVDP H +I +D  ++W+    H+ R  RGLTSAGKK
Sbjct:    5 AYSYIRDAWKNPSKTYVGELFWERLQEWRKEPTVVKIDRPTRLDRARALGYKAKQGIIVARAHVRRGGRRKSRYSR--GRKSKHMGLRTLTRRTSIQRMAEVRASRKFPNMEVLNSYWVGQDGKHKWYEIILVDPHHPSIASDKNLSWITKGTHRGRAERGLTSAGKK 170          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METMJ (50S ribosomal protein L15e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.937e-26
Identity = 67/167 (40.12%), Postives = 89/167 (53.29%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            Y +V E W++     ++ L   R   +R+  SIVRV  PTR D+AR LGYKAKQ                         +    G+ +L   +S + +AEERA RK   +  LNSYW+ ED   K+FEVILVD  H +I++D  + WL NPVH+ R  RG TSAG K
Sbjct:    6 YAYVREAWKRPDRSEVKALLWERLQTWRREGSIVRVEHPTRIDRARSLGYKAKQGIVVVRVKIRRGGRRKPRYTR--GRRSARMGMRRLTPAKSLQRMAEERASRKFPNMEALNSYWVGEDGRSKWFEVILVDGHHPSIKSDRNLAWLANPVHRGRAERGKTSAGMK 170          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METAC (50S ribosomal protein L15e OS=Methanosarcina acetivorans GN=rpl15e PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.016e-25
Identity = 64/168 (38.10%), Postives = 91/168 (54.17%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            Y +V + W+      +  L+  R   +R+  S+ R+ RPTR D+AR LGYKAKQ                        G+ T + G  ++    S + +AE RA R+   L VLNSYW+ ED  +K+FEVILVDP H  I++D  +NW+C+P  + R  RG TSAG+K
Sbjct:    6 YGYVRDAWKNPDETYVNELRWERLQVWRKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEVRADRRYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWVCDPSSRGRATRGKTSAGRK 170          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_THEVO (50S ribosomal protein L15e OS=Thermoplasma volcanium GN=rpl15e PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.145e-25
Identity = 70/189 (37.04%), Postives = 96/189 (50.79%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            Y  + E W+  +   +  +++ R   +R  PS+VR+  PTR D+AR LGYK+K                      I+ G+ P      +L  ++S + +AEERA  K   L VLNSY++ ED  YKY+EVILVD +H  I NDP I+W+  P +  R  RGLTSAG K               PS RAN
Sbjct:    7 YQEIREEWKSLKKSEIYDVEKSRMIGWRHGPSVVRLDHPTRIDRARALGYKSKDGFIVVRSRVRRGGSNREK---IMGGRRPRRLAYNKLTRKKSLKLIAEERAADKYPNLEVLNSYYVGEDGLYKYYEVILVDKSHPNIYNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRAN 192          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_PICTO (50S ribosomal protein L15e OS=Picrophilus torridus GN=rpl15e PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.145e-25
Identity = 70/193 (36.27%), Postives = 104/193 (53.89%), Query Frame = 3
Query:   51 MGAYTFVSELWRK-KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            + +Y+ + + W+K K+SD+   +Q+ R   +R+  S+VR+  PTR D+AR LGYKAKQ                     I+ G+ P      +L  ++S + +AEERA  K   + VLNSY++ ED  YKY+EVIL+D +  A+ +D  ++W+ N  +K R  RGLTSAG K               PS RAN
Sbjct:    2 LSSYSMIRDSWKKLKKSDIYP-VQKARMVSWRKSGSVVRLDYPTRLDRARSLGYKAKQGFIIVRSRVRKGGQHRPK---IMGGRRPRRLAYNKLTVKKSIQLIAEERAADKYPNMEVLNSYYVGEDGLYKYYEVILIDRSSPAVLSDKNVSWIANSANKGRVYRGLTSAGYKSRGLGHGRLGSAKSRPSIRAN 190          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METMA (50S ribosomal protein L15e OS=Methanosarcina mazei GN=rpl15e PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.775e-25
Identity = 68/189 (35.98%), Postives = 95/189 (50.26%), Query Frame = 3
Query:   60 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            Y +V + W+      +  L+  R   +R+  S+ R+ RPTR D+AR LGYKAKQ                        G+ T + G  ++    S + +AE RA RK   L VLNSYW+ ED  +K+FEVILVDP H  I++D  +NW+C+   + R  RG TSAG+K               PS RA+
Sbjct:    6 YGYVRDAWKNPDETYVNELRWERLQVWRKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEARADRKYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWICDASIRGRATRGKTSAGRKGRGMSTRGKGTEKTRPSIRAH 191          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_HALMA (50S ribosomal protein L15e OS=Haloarcula marismortui GN=rpl15e PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.146e-24
Identity = 68/189 (35.98%), Postives = 94/189 (49.74%), Query Frame = 3
Query:   57 AYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYXXXXXXXXXXXXXXPSRRAN 623
            AY+++ + W+      +  LQ  R  E+R   ++ R+ RPTR DKAR  GYKAKQ                         K   QGVT++  ++  + VAEERA R    LRVLNSY + +D   K+ EVIL+DP H AI+ND  ++W+C      R  RGLT AG++               PS R+N
Sbjct:    5 AYSYIRDAWKNPGDGQLAELQWQRQQEWRNEGAVERIERPTRLDKARSQGYKAKQGVIVARVSVRKGSARKRRHKAGRRSK--RQGVTRITRRKDIQRVAEERASRTFPNLRVLNSYSVGQDGRQKWHEVILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGRRNRGLSGKGKGSEKTRPSLRSN 191          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_METB6 (50S ribosomal protein L15e OS=Methanoregula boonei (strain 6A8) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.429e-24
Identity = 66/169 (39.05%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   60 YTFVSELW-RKKQSDVMRFL-QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKK 560
            Y +V E W R  +SDV   L  R++ W  R+  S+ R+ RPTR D+AR LGYKAKQ                     +   +    G       +S + +AEERA  +   + VLNSYW+ +D   KY+EVILVD  H +I++D  + WL NP H+ R  RG TSAG+K
Sbjct:    6 YAYVREAWARPDKSDVKALLWDRMQVW--RREGSVTRIDRPTRIDRARALGYKAKQGIAVVRVHVRRGGRRASRY--VRARRSARMGKNSSTPGKSIQRIAEERASVRYPNMEVLNSYWVGQDGKLKYYEVILVDGHHPSIQSDKNLAWLANPTHRGRAERGKTSAGRK 170          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAE (50S ribosomal protein L15e OS=Pyrobaculum aerophilum GN=rpl15e PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.023e-21
Identity = 66/169 (39.05%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   57 AYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLC-NPVHKHRELRGLTSAGKK 560
            AY++++  +RK   +V   L R    E+R+ P+IVRV RP R ++AR+LGYKAKQ                         +P   GV  +   +S R VAEERA RK   L VLNSYW+ +D  Y+YFEVIL+D     I+NDP  + +C   V + R +R L    KK
Sbjct:    5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQGVVVVRVRLMRGPFNRRRPDS--GRRPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTIKNDPLYSGICGREVPRRRIIRRLRERQKK 171          
BLAST of EY735768 vs. ExPASy Swiss-Prot
Match: RL15_BRANA (60S ribosomal protein L15 (Fragment) OS=Brassica napus GN=RPL15 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.856e-19
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 3
Query:  105 MRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQ 221
            MRF+QRVRCWEYRQ PSIVR+ RPTRPDKARRLGYKAKQ
Sbjct:    3 MRFVQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQ 41          

HSP 2 Score: 36.5798 bits (83), Expect = 1.856e-19
Identity = 19/29 (65.52%), Postives = 20/29 (68.97%), Query Frame = 1
Query:  277 PRALCMVNPQTRVLLN*SFSAARGLLQRS 363
            P+ LCMVNPQTR LLN S   A  LL RS
Sbjct:   60 PKVLCMVNPQTRELLNSSSRGATVLLLRS 88          
The following BLAST results are available for this feature:
BLAST of EY735768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15E_UNCMA7.937e-2636.9050S ribosomal protein L15e OS=Uncultured methanoge... [more]
RL15E_METMJ7.937e-2640.1250S ribosomal protein L15e OS=Methanoculleus maris... [more]
RL15E_METAC3.016e-2538.1050S ribosomal protein L15e OS=Methanosarcina aceti... [more]
RL15E_THEVO5.145e-2537.0450S ribosomal protein L15e OS=Thermoplasma volcani... [more]
RL15E_PICTO5.145e-2536.2750S ribosomal protein L15e OS=Picrophilus torridus... [more]
RL15E_METMA8.775e-2535.9850S ribosomal protein L15e OS=Methanosarcina mazei... [more]
RL15E_HALMA1.146e-2435.9850S ribosomal protein L15e OS=Haloarcula marismort... [more]
RL15E_METB67.429e-2439.0550S ribosomal protein L15e OS=Methanoregula boonei... [more]
RL15E_PYRAE2.023e-2139.0550S ribosomal protein L15e OS=Pyrobaculum aerophil... [more]
RL15_BRANA1.856e-1989.7460S ribosomal protein L15 (Fragment) OS=Brassica n... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-H01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735768 ID=EY735768; Name=EY735768; organism=Citrus sinensis; type=EST; length=881bp
CCACGCGTCCGCGGATACTGCGCAGCTCAGCTCAGCTCAGCTCAGAGCCA
ATGGGGGCTTACACGTTCGTGTCGGAGCTATGGAGGAAGAAGCAGTCAGA
TGTGATGAGGTTCTTGCAGAGGGTGAGGTGTTGGGAGTACCGCCAACATC
CATCTATTGTTAGGGTCACCCGTCCCACTCGACCTGACAAGGCTCGACGC
TTGGGTTACAAGGCCAAGCAGGGTTATGTTGTTTATCGTGTGCGGGTAAG
GCGTGGTGGTCGGAAGAGGCCTGTTCCCAAGGGCATTGTGTATGGTAAAC
CCACAAACCAGGGTGTTACTCAACTGAAGTTTCAGCGCAGCAAGAGGTCT
GTTGCAGAGGAGCGTGCCGGTCGTAAGTTGGGAGGTCTTAGGGTTCTCAA
TTCTTACTGGATCAATGAGGACTCCACTTATAAGTACTTTGAGGTGATCT
TGGTTGATCCTGCTCATAATGCCATCCGAAATGACCCAAGAATTAATTGG
TTATGCAATCCTGTCCATAAGCACAGGGAACTCCGTGGTCTTACTTCTGC
AGGTAAGAAGTACAGAGGCCTACGTGGAAAAGGACACTTGCACCACAGAG
GTCGGCCTTCGCGCAGGGCTAACTGGGAAGAGAAACAATACTCTTTCCCT
CCCGTCTCTACCGTTGGAATCATTGTATGGGTTTTGATGGTTTATCATCC
GGTGGAGGGATTTGGGCTGGAGGAACATGTTAGTTGCCATTTTGAGTGCT
TGAAACAATCGCAATTATTGGGGAAGATATTTGAAGTGTGAACCGTTGCG
TTCTAAATTACGAGAATGTGGTGTCTGGGTCTCGTCCGTGGAGTGTGTGA
AGCCTTCGATTTTTTGCAGCCCACACAAGCC
back to top