EY735725

Overview
NameEY735725
Unique NameEY735725
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_YERP3 (Co-chaperone protein hscB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=hscB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13
Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF L   + +D  QL TRY+EL R  HPDRFA   ERE+  +++Q+A++++AYQTLK+P KRA  +L++
Sbjct:    3 YFTLFGLPARYLIDGNQLTTRYQELQRQFHPDRFATQPERERLASMQQAATINDAYQTLKHPLKRAEYMLSL 74          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_SHESW (Co-chaperone protein hscB homolog OS=Shewanella sp. (strain W3-18-1) GN=hscB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13
Identity = 33/72 (45.83%), Postives = 54/72 (75.00%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF+  P+F +D   LA RYREL R VHPD+FA  +E+++ L+++++A +++ YQTLK+P +RA  LL++
Sbjct:    3 YFELFKFSPAFDIDTAVLAERYRELQRAVHPDKFAHDTEQQKLLSVQRTAQVNDGYQTLKDPIRRAEHLLSL 74          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_SHESR (Co-chaperone protein hscB homolog OS=Shewanella sp. (strain MR-7) GN=hscB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13
Identity = 32/72 (44.44%), Postives = 55/72 (76.39%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF+  P+F +D   LA RYREL R VHPD+FA+ +E+++ L+++++A +++ YQTLK+P +RA  +L++
Sbjct:    3 YFELFKFSPAFDIDTAVLAERYRELQRAVHPDKFANDTEQQRLLSVQRTAQVNDGYQTLKDPIRRAEHMLSL 74          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_SHESM (Co-chaperone protein hscB homolog OS=Shewanella sp. (strain MR-4) GN=hscB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13
Identity = 32/72 (44.44%), Postives = 55/72 (76.39%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF+  P+F +D   LA RYREL R VHPD+FA+ +E+++ L+++++A +++ YQTLK+P +RA  +L++
Sbjct:    3 YFELFKFSPAFDIDTAVLAERYRELQRAVHPDKFANDTEQQRLLSVQRTAQVNDGYQTLKDPIRRAEHMLSL 74          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_SHESA (Co-chaperone protein hscB homolog OS=Shewanella sp. (strain ANA-3) GN=hscB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13
Identity = 32/72 (44.44%), Postives = 55/72 (76.39%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF+  P+F +D   LA RYREL R VHPD+FA+ +E+++ L+++++A +++ YQTLK+P +RA  +L++
Sbjct:    3 YFELFKFSPAFDIDTAVLAERYRELQRAVHPDKFANDTEQQRLLSVQRTAQVNDGYQTLKDPIRRAEHMLSL 74          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_SHEPC (Co-chaperone protein hscB homolog OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=hscB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13
Identity = 33/72 (45.83%), Postives = 54/72 (75.00%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF+  P+F +D   LA RYREL R VHPD+FA  +E+++ L+++++A +++ YQTLK+P +RA  LL++
Sbjct:    3 YFELFKFSPAFDIDTAVLAERYRELQRAVHPDKFAHDTEQQKLLSVQRTAQVNDGYQTLKDPIRRAEHLLSL 74          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_SERP5 (Co-chaperone protein hscB OS=Serratia proteamaculans (strain 568) GN=hscB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13
Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF L   + +D   LA+RY++L R  HPDRFA   ERE+ +AL+Q+A+++EAYQTLK+P KRA  +L++
Sbjct:    3 YFTLFGLPVRYPVDGSLLASRYQDLQRQFHPDRFASQPERERLMALQQAATINEAYQTLKHPLKRAEYMLSL 74          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_SHEON (Co-chaperone protein hscB homolog OS=Shewanella oneidensis GN=hscB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13
Identity = 32/72 (44.44%), Postives = 55/72 (76.39%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF+  P+F +D   LA RYREL R VHPD+FA+ +E+++ L+++++A +++ YQTLK+P +RA  +L++
Sbjct:    3 YFELFKFPPTFDIDTAVLADRYRELQRAVHPDKFANDTEQQRLLSVQRTAQVNDGYQTLKDPIRRAEHMLSL 74          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_AERS4 (Co-chaperone protein hscB homolog OS=Aeromonas salmonicida (strain A449) GN=hscB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.254e-13
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            HF LF L   F LD  +LA  YR+L    HPDRFA A EREQ +A++++A +++AY TLK P +RA  LL++
Sbjct:    3 HFELFGLVEGFELDTRKLADTYRQLQTQFHPDRFATAPEREQLVAVQRAAQINDAYTTLKTPLRRAEYLLSL 74          

HSP 2 Score: 21.1718 bits (43), Expect = 5.254e-13
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  277 TVXEPDFLMQQNAWR 321
            T+ +  FLMQQ  WR
Sbjct:   85 TLQDTSFLMQQLEWR 99          
BLAST of EY735725 vs. ExPASy Swiss-Prot
Match: HSCB_SHEAM (Co-chaperone protein hscB homolog OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=hscB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.818e-13
Identity = 34/72 (47.22%), Postives = 54/72 (75.00%), Query Frame = 3
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLHEAYQTLKNPPKRARXLLAM 248
            +F LF L  +F ++  +LA +YREL R VHPD+FA ASE+E+ LA+ ++A +++ +QTLK+P +RA  +LA+
Sbjct:    3 YFELFNLPVAFDVNTSELADKYRELQRTVHPDKFAAASEQEKLLAVSRTAMVNDGFQTLKDPIRRAEHMLAL 74          

HSP 2 Score: 21.9422 bits (45), Expect = 6.818e-13
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  277 TVXEPDFLMQQNAWR 321
            TV +  FLMQQ  WR
Sbjct:   85 TVRDTAFLMQQMEWR 99          
The following BLAST results are available for this feature:
BLAST of EY735725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
HSCB_YERP33.559e-1348.61Co-chaperone protein hscB OS=Yersinia pseudotuberc... [more]
HSCB_SHESW3.559e-1345.83Co-chaperone protein hscB homolog OS=Shewanella sp... [more]
HSCB_SHESR3.559e-1344.44Co-chaperone protein hscB homolog OS=Shewanella sp... [more]
HSCB_SHESM3.559e-1344.44Co-chaperone protein hscB homolog OS=Shewanella sp... [more]
HSCB_SHESA3.559e-1344.44Co-chaperone protein hscB homolog OS=Shewanella sp... [more]
HSCB_SHEPC3.559e-1345.83Co-chaperone protein hscB homolog OS=Shewanella pu... [more]
HSCB_SERP53.559e-1350.00Co-chaperone protein hscB OS=Serratia proteamacula... [more]
HSCB_SHEON4.649e-1344.44Co-chaperone protein hscB homolog OS=Shewanella on... [more]
HSCB_AERS45.254e-1350.00Co-chaperone protein hscB homolog OS=Aeromonas sal... [more]
HSCB_SHEAM6.818e-1347.22Co-chaperone protein hscB homolog OS=Shewanella am... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-B09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735725 ID=EY735725; Name=EY735725; organism=Citrus sinensis; type=EST; length=654bp
AACATCTGAGGCTGATTGTGGGTACTCCTTGTCATTTCGCTTTATTCGAG
CTGCAGCCGAGTTTTCGACTGGACCTTGAACAGCTTGCCACGCGCTACCG
TGAACTGGCGCGTGGGGTGCATCCGGACCGCTTTGCTGACGCTTCCGAGC
GTGAGCAACGCTTGGCGCTCGAGCAATCAGCCAGCCTCCACGAAGCCTAT
CAGACGCTCAAGAACCCTCCCAAACGCGCGCGCTNACTGCTCGCCATGGG
GCGGTCGCGAGCTGCCGCTTGAAGTCACGGTCCANGAACCTGATTTCCTG
ATGCAGCAGAATGCATGGCGCGAGGAGCTCGAAGAACTGCAGGACGAGGC
CGATCTGGCCGGAGTCGCGGTCTTCAANCGCCGTCTTAAAATTGGCCCAG
TATAAACTCAACGAAAACTTCCCAGCCTGTTTGGGATTAACCCGCCCCAC
TTAAGCAGGGCCAAACGCCTGATGCGGCGCATGCAGTTCCTCGGACAGCT
CACCTACAAAGTGCGCCAGTTAGAAGAGCGCCTCGACGATTAACCCAGTG
CCGCCACGTTGTACGCCTGATATAGAGAAAGGGCTCGATAACAGCGGGGC
CCCTGCTGGATGATCGCACCAACCGGGGCAAGTCCTCGACCCCACCCACG
TCCT
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