EY735710

Overview
NameEY735710
Unique NameEY735710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y2432_SHEON (UPF0082 protein SO_2432 OS=Shewanella oneidensis GN=SO_2432 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.765e-14
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK  QDAK+GK+FTK+IRELT  AR+GG +P SNP
Sbjct:    1 MAGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1648_NEIMB (UPF0082 protein NMB1648 OS=Neisseria meningitidis serogroup B GN=NMB1648 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI H+K RQDAK+GKIFT+ I+E+T  AR GG +PGSNP
Sbjct:    1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1902_NEIMA (UPF0082 protein NMA1902 OS=Neisseria meningitidis serogroup A GN=NMA1902 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.044e-14
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI H+K RQDAK+GKIFT+ I+E+T  AR GG +PG+NP
Sbjct:    1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1563_NEIMF (UPF0082 protein NMC1563 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=NMC1563 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.044e-14
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI H+K RQDAK+GKIFT+ I+E+T  AR GG +PG+NP
Sbjct:    1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1508_NEIG2 (UPF0082 protein NGK_1508 OS=Neisseria gonorrhoeae (strain NCCP11945) GN=NGK_1508 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.044e-14
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI H+K RQDAK+GKIFT+ I+E+T  AR GG +PG+NP
Sbjct:    1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1291_NEIG1 (UPF0082 protein NGO1291 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=NGO1291 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.044e-14
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI H+K RQDAK+GKIFT+ I+E+T  AR GG +PG+NP
Sbjct:    1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y2422_BORPA (UPF0082 protein BPP2422 OS=Bordetella parapertussis GN=BPP2422 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.051e-13
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNPASAPGPWNRASAA 433
            MAGHSKWANI HRK RQDAK+GK++TK IRE+T  AR GG +P SNP      W++A+ A
Sbjct:    1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDSNPRLRMA-WDKATDA 59          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y2308_BORPE (UPF0082 protein BP2308 OS=Bordetella pertussis GN=BP2308 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.051e-13
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNPASAPGPWNRASAA 433
            MAGHSKWANI HRK RQDAK+GK++TK IRE+T  AR GG +P SNP      W++A+ A
Sbjct:    1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDSNPRLRMA-WDKATDA 59          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1871_BORBR (UPF0082 protein BB1871 OS=Bordetella bronchiseptica GN=BB1871 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.051e-13
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNPASAPGPWNRASAA 433
            MAGHSKWANI HRK RQDAK+GK++TK IRE+T  AR GG +P SNP      W++A+ A
Sbjct:    1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDSNPRLRMA-WDKATDA 59          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y3099_BORPD (UPF0082 protein Bpet3099 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=Bpet3099 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.372e-13
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNPASAPGPWNRASAA 433
            MAGHSKWANI HRK RQDAK+GK++TK IRE+T  AR GG +P SNP      W++A+ A
Sbjct:    1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGPDPDSNPRLRMA-WDKATDA 59          
The following BLAST results are available for this feature:
BLAST of EY735710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
Y2432_SHEON2.765e-1474.47UPF0082 protein SO_2432 OS=Shewanella oneidensis G... [more]
Y1648_NEIMB3.611e-1472.34UPF0082 protein NMB1648 OS=Neisseria meningitidis ... [more]
Y1902_NEIMA8.044e-1470.21UPF0082 protein NMA1902 OS=Neisseria meningitidis ... [more]
Y1563_NEIMF8.044e-1470.21UPF0082 protein NMC1563 OS=Neisseria meningitidis ... [more]
Y1508_NEIG28.044e-1470.21UPF0082 protein NGK_1508 OS=Neisseria gonorrhoeae ... [more]
Y1291_NEIG18.044e-1470.21UPF0082 protein NGO1291 OS=Neisseria gonorrhoeae (... [more]
Y2422_BORPA1.051e-1361.67UPF0082 protein BPP2422 OS=Bordetella parapertussi... [more]
Y2308_BORPE1.051e-1361.67UPF0082 protein BP2308 OS=Bordetella pertussis GN=... [more]
Y1871_BORBR1.051e-1361.67UPF0082 protein BB1871 OS=Bordetella bronchiseptic... [more]
Y3099_BORPD1.372e-1361.67UPF0082 protein Bpet3099 OS=Bordetella petrii (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-A05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735710 ID=EY735710; Name=EY735710; organism=Citrus sinensis; type=EST; length=482bp
CAAAGTGCTGCCGACGTCATGACGCAAGCACCGGGTGTGGTGGATGCCAA
TGCACTGCGCAAGCTGCATATCCGTCTGAGCGAGACACGAAAGGCTGAGT
AAGGCCGCAGCGTGAAAGCGCGATAAGGTTTTACATTGTCAGCTAAGGGC
GCATCTTCGGATGCGCCTTTGCGTGACAAGGGCTGCACGTTAGAGAGGGA
ANTCCCGCCTGGGGCGGGATCGACAGGTTTCTACAGAATTTCAGAGTTGT
GTTATGGCTGGCCATTCCAAGTGGGCGAACATCGACCACCGCAAAAAGCG
TCAGGATGCCAAGAAAGGCAAGATCTTCACCAAGTGGATTCGCGAGCTGA
CCCGCNCTGCGCGCCAAGGTGGGCGTGAACCGGGTTCCAACCCCGCGTCT
GCGCCTGGACCCTGGAACAGGGCCTCGGCCGCCACATGAACCCCCAAATC
ATCGAACGGCCCGTGGCCCGTGTTGCCGGGGG
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