EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_THIDA (1,4-alpha-glucan-branching enzyme OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 45/138 (32.61%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+RG H+ WGT +F +   +V +FL++N  +W+ E+ IDG +  +++SM+Y    ++   G+ L        + +A+ +L   N  +HA  P  ITIAE++T +P +  P   GGLGF    N+      L ++E  P
Sbjct:  376 PRRGEHQDWGTLVFDFGRNEVRNFLVANALYWLEEFHIDGLRVDAVASMLYL--DYSRRHGEWLPNQHGGRENLEAIHFLHEVNAEVHARFPGAITIAEESTAWPAVSRPIELGGLGFSMKWNMGWMNDTLDYIEKEP 511          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SYNSC (1,4-alpha-glucan-branching enzyme OS=Synechococcus sp. (strain CC9605) GN=glgB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 45/138 (32.61%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y    +    G+ L        + +A+ +L  AN +L    P  ++IAE++T +P + +PT  GGLGF+   N+      L + E  P
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLIFWFEQFHIDGIRVDAVASMLY--RDYLRPDGEWLPNESGGRENTEAVRFLQQANHVLFQHFPGALSIAEESTTWPMVTQPTDSGGLGFNLKWNMGWMHDMLDYFELDP 523          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SYNR3 (1,4-alpha-glucan-branching enzyme OS=Synechococcus sp. (strain RCC307) GN=glgB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 47/137 (34.31%), Postives = 76/137 (55.47%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLE 409
            P+ G HK WGT +F Y   +V +FL++NL +W  E  IDG +  +++SM+Y       L  D E   N++  +   +A+ +L  AN +L    P  ++IAE++T +P +  PT+ GGLGF+   N+      L + E
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVFWFEELHIDGIRVDAVASMLYRD----YLRPDGEWIANEHGGRENLEAVRFLQQANSVLFHYFPGALSIAEESTTWPLVTMPTSMGGLGFNLKWNMGWMHDMLDYFE 520          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PSESM (1,4-alpha-glucan-branching enzyme OS=Pseudomonas syringae pv. tomato GN=glgB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 51/186 (27.42%), Postives = 100/186 (53.76%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            PK GFH+ W T ++     +V  F+L++   W+  Y IDG +  +++SM+Y    ++   G+ +        + +A+ +L   N+++    P  + IAE++T +PG+ E T +GGLGF+Y  N+      L ++E  P + E    K+  +LV    +S++ ++   +H++ + G HS  + + G+
Sbjct:  377 PKEGFHQDWDTLIYNLGRTEVHGFMLASALHWLKHYHIDGLRVDAVASMLY--RDYSRKAGEWVPNRFGGRENLEAIDFLRHLNDVVALEAPGTMVIAEESTAWPGVSESTQKGGLGFNYKWNMGWMHDSLQYMEEDPINREHHHGKLSFSLV--YAWSERFVL-PISHDEVVHGKHSLIDKMPGD 557          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROMM (1,4-alpha-glucan-branching enzyme OS=Prochlorococcus marinus (strain MIT 9313) GN=glgB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 47/140 (33.57%), Postives = 77/140 (55.00%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQ---YVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y       L  D E   N+     + +A+ +L  AN +L    P  ++IAE++T +P + +PT  GGLGF+   N+      L + E  P
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVYWFEQFHIDGIRVDAVASMLYRD----YLRPDGEWIANEDGGRENTEAVRFLQQANHVLFQHFPGALSIAEESTTWPMVTQPTDIGGLGFNLKWNMGWMHDMLDYFELDP 523          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_COREF (1,4-alpha-glucan-branching enzyme OS=Corynebacterium efficiens GN=glgB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 2
Query:   11 KRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKD---ALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            +RG  K WGT +F +   +V +FL++N  +W+ E+ +DG +  +++SM+Y    ++   G+ E   N Y  ++   A+ +L   N  +  +HP  +TIAE++T +PG+  PT  GGLGF    N+      L +    P H
Sbjct:  366 RRGEQKDWGTYVFNFGRSEVRNFLVANALYWLEEFHVDGLRVDAVASMLYLD--YSREHGEWEP--NVYGGRENLEAVQFLQEMNATVQRVHPGALTIAEESTSWPGVTAPTWDGGLGFSLKWNMGWMNDTLEYFSKDPIH 502          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_CELJU (1,4-alpha-glucan-branching enzyme OS=Cellvibrio japonicus (strain Ueda107) GN=glgB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 44/140 (31.43%), Postives = 74/140 (52.86%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ G H+ WGT ++ Y   +V +FLL+N  +W+ EY IDG +  +++SM+  H  ++   G+ +        + +A+ +L   N I H  H   + IAE++T +P +  PT  GGLGF    N+      L ++   P H
Sbjct:  376 PRLGEHRDWGTLIYNYGRSEVRNFLLANALFWLKEYHIDGLRVDAVASML--HLDYSRQPGEWIPNIHGGNENLEAMTFLQQLNAICHGQHSGALVIAEESTAWPQVTRPTWVGGLGFSMKWNMGWMHDTLEYMSREPVH 513          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_BACCL (1,4-alpha-glucan-branching enzyme OS=Bacillus caldolyticus GN=glgB PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 57/181 (31.49%), Postives = 93/181 (51.38%), Query Frame = 2
Query:   32 WGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHE--WSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEISE 568
            WGT  F     +V  FL+SN  +W+  Y +DGF+  ++++M+Y  N           Y N Y    A+ +L   NE + A  PN+  IAED+T +P +  PT  GGLGF+Y  N+      L ++E TP HE  ++ +++  +L+    YS+  I+   +H++ + G  S    + G   E
Sbjct:  274 WGTANFDLGKPEVRSFLISNALFWLEYYHVDGFRVDAVANMLYWPNNDRL-------YENPY----AVEFLRQLNEAVFAYDPNVWMIAEDSTDWPRVTAPTYDGGLGFNYKWNMGWMNDMLKYME-TPPHERKYAHNQVSFSLL--YAYSENFIL-PFSHDEVVHGKKSLLNKMPGSYEE 439          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_THICR (1,4-alpha-glucan-branching enzyme OS=Thiomicrospira crunogena (strain XCL-2) GN=glgB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 47/140 (33.57%), Postives = 76/140 (54.29%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+RG H+ WGT +F Y   +V +FL++N  +W+ E  IDG +  +++SM+Y    ++   GD     NQY  +   +A+ +L   N  +HA  P  + +AE++T +P +  PT  GGLGF    N+      L F +  P
Sbjct:  364 PRRGEHQDWGTYIFNYGRNEVRNFLIANALYWLKELHIDGLRVDAVASMLYL--DYSRKDGDW--LPNQYGGRENIEAIEFLKTLNAEVHAQCPGALMMAEESTSWPMVSRPTWMGGLGFSMKWNMGWMNDTLDFFQQDP 499          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SYNPW (1,4-alpha-glucan-branching enzyme OS=Synechococcus sp. (strain WH7803) GN=glgB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQY---VDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y       L  D E   N++    + +A+ +L  AN +L    P  ++IAE++T +P + +PT  GGLGF+   N+      L + E  P
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVFWFDQFHIDGIRVDAVASMLYRD----YLRPDGEWLPNEHGGRENTEAVQFLQQANHVLFQHFPGALSIAEESTTWPMVTQPTDIGGLGFNLKWNMGWMHDMLDYFELDP 523          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_THIDA1.907e-1432.611,4-alpha-glucan-branching enzyme OS=Thiobacillus ... [more]
GLGB_SYNSC1.907e-1432.611,4-alpha-glucan-branching enzyme OS=Synechococcus... [more]
GLGB_SYNR31.907e-1434.311,4-alpha-glucan-branching enzyme OS=Synechococcus... [more]
GLGB_PSESM1.907e-1427.421,4-alpha-glucan-branching enzyme OS=Pseudomonas s... [more]
GLGB_PROMM1.907e-1433.571,4-alpha-glucan-branching enzyme OS=Prochlorococc... [more]
GLGB_COREF1.907e-1431.911,4-alpha-glucan-branching enzyme OS=Corynebacteri... [more]
GLGB_CELJU1.907e-1431.431,4-alpha-glucan-branching enzyme OS=Cellvibrio ja... [more]
GLGB_BACCL1.907e-1431.491,4-alpha-glucan-branching enzyme OS=Bacillus cald... [more]
GLGB_THICR2.490e-1433.571,4-alpha-glucan-branching enzyme OS=Thiomicrospir... [more]
GLGB_SYNPW2.490e-1433.571,4-alpha-glucan-branching enzyme OS=Synechococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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