EY735650

Overview
NameEY735650
Unique NameEY735650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.554e-53
Identity = 118/221 (53.39%), Postives = 134/221 (60.63%), Query Frame = 3
Query:   39 KVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTLCXXXXXXXXXXXXXXXSCMTSVGIVEGRHTRWSLCVARPHHPCRAPRWRDRLTWRGGLRPALG--PSPVGSVRGL 695
            K+KIGI GFGRIG LVARV L RDDVELVAVNDPFI            SVHG WK+ EL VKD  TLLFG+KPVTVF  RNP EIPWA TGA+ +VESTGVFTDKDKAAAHL GGAKKVI+SAPS DAPMFVVGVN+++Y     +                      GIVEG  T     +         P  +D   WRGG   +    PS  G+ + +
Sbjct:    4 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELTVKDSNTLLFGQKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVH-SITATQKTVDGPSSKD---WRGGRAASFNIIPSSTGAAKAV 220          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.128e-52
Identity = 116/212 (54.72%), Postives = 130/212 (61.32%), Query Frame = 3
Query:   66 GRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTLCXXXXXXXXXXXXXXXSCMTSVGIVEGRHTRWSLCVARPHHPCRAPRWRDRLTWRGGLRPALG--PSPVGSVRGL 695
            GRIG LVARV L RDDVELVAVNDPFI            SVHG WKHHELKVKD+KTLLFGEK V VFG+RNP EIPWAE GA++VVESTGVFTDKDKAAAHL GGAKKV++SAPS DAPMFVVGVN+ +Y     +                      GIVEG  T      A        P  +D   WRGG   +    PS  G+ + +
Sbjct:    1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPEYDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSLTA-TQKTVDGPSMKD---WRGGRATSFNIIPSSTGAAKAV 208          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.404e-49
Identity = 86/140 (61.43%), Postives = 103/140 (73.57%), Query Frame = 3
Query:   39 KVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            K+K+GI GFGRIG LVARV L RDD+ELVA+NDPFI            S HG WK  E+ +  +  L FG  PV V+  R+P EIPW + GA++VVESTGVFTDKDKAAAHL GGAKKV++SAPS DAPMFV+GVN++ Y
Sbjct:    6 KIKVGINGFGRIGRLVARVALERDDIELVAINDPFITPEYMTYMFKYDSTHGQWKKTEVTLHSEGHLTFGGNPVAVYACRDPSEIPWGKHGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVMGVNENKY 145          

HSP 2 Score: 41.5874 bits (96), Expect = 1.404e-49
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  470 NIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            +IVSNASC T+CLAPLA V++DK G   G
Sbjct:  149 DIVSNASCTTNCLAPLAKVINDKFGILEG 177          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.883e-41
Identity = 96/191 (50.26%), Postives = 108/191 (56.54%), Query Frame = 3
Query:  129 VNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTLCXXXXXXXXXXXXXXXSCMTSVGIVEGRHTRWSLCVARPHHPCRAPRWRDRLTWRGGLRPALG--PSPVGSVRGL 695
            VNDPFI            +VHG WKHHE+KVKD KTLLFGEK V VFG RNP EIPWA  GAEYVVESTGVFTDKDKAAAH+ GGAKKVI+SAPS DAPMFV GVN+ +Y     +                      GIVEG  T      A        P  +D   WRGG   +    PS  G+ + +
Sbjct:    1 VNDPFITTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHIKGGAKKVIISAPSKDAPMFVCGVNEKEYKSDIDIVSNASCTTNCPAPLAKVINDRFGIVEGLMTTVHAMTA-TQKTVDGPSSKD---WRGGRAASFNIIPSSTGAAKAV 187          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_ONCVO (Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 8.370e-40
Identity = 78/149 (52.35%), Postives = 97/149 (65.10%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKP---VTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSS 470
            M K KIGI GFGRIG LV R  + +D VE+VAVNDPFI            S HG +K H +  +  K ++   K    + V   ++P EIPW   GAEYVVESTGVFT  +KA+AHL GGAKKVI+SAPS DAPMFV+GVN+  Y +++
Sbjct:    1 MSKPKIGINGFGRIGRLVLRAAVEKDTVEVVAVNDPFINIDYMVYMFKYDSTHGRFKGH-VSAEGGKLIVTNGKTTHQIAVHNSKDPAEIPWGVEGAEYVVESTGVFTHTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNDKYDKAN 148          

HSP 2 Score: 43.8986 bits (102), Expect = 8.370e-40
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  470 NIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            +I+SNASC T+CLAPLA V+HDK G   G
Sbjct:  150 HIISNASCTTNCLAPLAKVIHDKFGIIEG 178          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.143e-39
Identity = 73/142 (51.41%), Postives = 94/142 (66.20%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQS 467
            VKIG+ GFGRIG LV R     D V++VA+NDPFI            S HG + H  +K ++ K ++ G+  +T+F  R+P  I W + GAEYVVESTGVFT  +KA+AHL GGAK+V++SAPS DAPMFV+GVN   Y  S
Sbjct:    2 VKIGVNGFGRIGRLVTRAAFTCDKVQIVAINDPFIDLNYMVYMFKYDSTHGRF-HGTVKAENGKLVINGQA-ITIFQERDPANIKWGDAGAEYVVESTGVFTTTEKASAHLKGGAKRVVISAPSADAPMFVMGVNHEKYDNS 141          

HSP 2 Score: 43.5134 bits (101), Expect = 3.143e-39
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 2
Query:  467 LNIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            L +VSNASC T+CLAPLA V+HD  G   G
Sbjct:  142 LKVVSNASCTTNCLAPLAKVIHDNYGMVEG 171          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 9.053e-39
Identity = 76/149 (51.01%), Postives = 97/149 (65.10%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKP---VTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSS 470
            M K K+GI GFGRIG LV R  + +D V++VAVNDPFI            S HG +K   +  +  K ++   K    ++V   ++P EIPW   GAEYVVESTGVFT  DKA+AHL GGAKKVI+SAPS DAPMFV+GVN+  Y +++
Sbjct:    1 MSKPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFINIDYMVYMFKYDSTHGRFKG-SVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMYDKAN 148          

HSP 2 Score: 43.8986 bits (102), Expect = 9.053e-39
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  470 NIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            +I+SNASC T+CLAPLA V+HDK G   G
Sbjct:  150 HIISNASCTTNCLAPLAKVIHDKFGIIEG 178          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.002e-38
Identity = 75/139 (53.96%), Postives = 95/139 (68.35%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            VK+GI GFGRIG +V R  +  +DVE+VAVNDPFI            S HG +K  ++KV+ +   + G K +  +  ++P  IPW+ETGA YVVESTGVFT  DKA AHL GGAKKV++SAPS DAPMFV+GVN+  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSQHGQFKG-DIKVEGNDLTING-KTIRFYTEKDPANIPWSETGAYYVVESTGVFTTTDKAKAHLKGGAKKVVISAPSADAPMFVMGVNNETY 139          

HSP 2 Score: 41.5874 bits (96), Expect = 2.002e-38
Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query:  464 ELNIVSNASCATSCLAPLAHVMHDK 538
            ++ ++SNASC T+CLAPLA V+HDK
Sbjct:  142 DIEVLSNASCTTNCLAPLAKVIHDK 166          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.608e-38
Identity = 77/142 (54.23%), Postives = 91/142 (64.08%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            M  +K+GI GFGRIG +V R      +VE+VAVNDPFI            S HG +      V+D   L+   + V  +  RNP EIPWAETGAEY+VESTGVFT  +KA AHL GGAKKVI+SAPS DAPMFV+GVN   Y
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAAQSCEVEVVAVNDPFIEPEYAAYMLKYDSTHGQFNGDIQTVEDG--LVVNSRNVKFYNKRNPEEIPWAETGAEYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMFVMGVNHKSY 140          

HSP 2 Score: 38.891 bits (89), Expect = 2.608e-38
Identity = 15/25 (60.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query:  464 ELNIVSNASCATSCLAPLAHVMHDK 538
            +L ++SNASC T+CLAPLA V++D+
Sbjct:  143 DLEVISNASCTTNCLAPLAKVINDE 167          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.512e-38
Identity = 74/145 (51.03%), Postives = 92/145 (63.45%), Query Frame = 3
Query:   36 GKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSS 470
            GK+KIGI GFGRIG LV R  +LR D+E+VA+NDPFI            SVH  W  H    KD    L   + +  F   +P +I W   GA+ V+ESTGVFTD  KA AHL GGAKKVI++APSNDAPM+V+GVN   Y+ ++
Sbjct:    3 GKIKIGINGFGRIGRLVMRATMLRPDIEVVAINDPFIDAEYMAYMFKYDSVHKTWPGHVNGSKDG--FLVEGRKIHTFTESDPSKINWGAAGADIVIESTGVFTDIAKATAHLTGGAKKVIITAPSNDAPMYVMGVNHEKYNPAT 145          

HSP 2 Score: 38.5058 bits (88), Expect = 7.512e-38
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  458 PPELNIVSNASCATSCLAPLAHVMHDKCG 544
            P   +I+SNASC T+CLAPLA V++ K G
Sbjct:  143 PATDHIISNASCTTNCLAPLAKVVNSKFG 171          
The following BLAST results are available for this feature:
BLAST of EY735650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 324
Match NameE-valueIdentityDescription
G3PC_PEA9.554e-5353.39Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TOBAC2.128e-5254.72Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PHYPA1.404e-4961.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_HORVU2.883e-4150.26Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ONCVO8.370e-4052.35Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchoc... [more]
G3P_TRISI3.143e-3951.41Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]
G3P_BRUMA9.053e-3951.01Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P_PHANO2.002e-3853.96Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P_ERYGR2.608e-3854.23Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]
G3PC_CHLRE7.512e-3851.03Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-C06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735650 ID=EY735650; Name=EY735650; organism=Citrus sinensis; type=EST; length=861bp
CTTGCACCGGTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATC
GGAATCTACGGATTCGGAAGAATTGGTACGCTGGTGGCAAGAGTCATCTT
GCTGAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAA
CCGATTACATGACATACATGTATAAGTACGACAGTGTTCACGGTCTATGG
AAGCACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGA
GAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGATCCCATGGG
CTGAGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGAC
AAGGATAAGGCTGCTGCCCATTTGAACGGTGGTGCTAAAAAAGTTATCCT
CTCAGCCCCCAGCAACGATGCTCCTATGTTTGTTGTGGGTGTCAATGACC
ACGACTACCACCAGAGCTCAACATTGTGTCCAATGCTAGCTGCGCCACCA
GCTGCCTTGCTCCCCTTGCTCATGTCATGCATGACAAGTGTGGGCATTGT
CGAGGGTCGTCATACCCGCTGGTCACTCTGCGTCGCGCGACCCCACCACC
CCTGCCGGGCCCCTCGCTGGCGGGATCGGCTGACGTGGAGGGGCGGGTTG
CGGCCAGCGCTCGGGCCATCGCCTGTTGGTTCTGTTCGTGGTTTGGAGAG
GGGGGGTTGCTGCTGTGGTTGTTCTCGGGGGGGGTGGTGCTGGGTGCCCT
CCCTCCCCTTCCTCTCCGCGCAACGCGTCCGTCTCCCTCGCCGTGCCCGC
GGTCGTTCCTCCGCCCCGCCCGGGCCTCCCCCCAGGCGCTCGGGCGGTGG
GCGGCGGGCCG
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