EY735650

Overview
NameEY735650
Unique NameEY735650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.275e-37
Identity = 74/139 (53.24%), Postives = 91/139 (65.47%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            VK+GI GFGRIG +V R  +  +DV++VAVNDPFI            S HG +K  ++KV D   L    K +     ++P  IPW+ETGA YVVESTGVFT  +KA AHL GGAKKV++SAPS DAPMFV+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVDIVAVNDPFIEPHYAAYMLKYDSTHGQFKG-DIKV-DGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSPDAPMFVMGVNHETY 139          

HSP 2 Score: 42.743 bits (99), Expect = 1.275e-37
Identity = 17/26 (65.38%), Postives = 22/26 (84.62%), Query Frame = 2
Query:  461 PELNIVSNASCATSCLAPLAHVMHDK 538
            P++  +SNASC T+CLAPLA V+HDK
Sbjct:  141 PDIEALSNASCTTNCLAPLAKVIHDK 166          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.164e-37
Identity = 76/148 (51.35%), Postives = 94/148 (63.51%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTL 476
            M  +K+GI GFGRIG +V R  +   DVE+VAVNDPFI            S HG++       +D   L+   K V  +  R+P  IPW ETGA+YVVESTGVFT  DKA AHL GGAKKVI+SAPS DAPM+V+GVN+  Y  S+ +
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIETKYAAYMLKYDSTHGIFNGEI--AQDGNDLVINGKKVKFYTERDPAVIPWKETGADYVVESTGVFTTIDKAKAHLQGGAKKVIISAPSADAPMYVMGVNEKSYDGSAVI 146          

HSP 2 Score: 35.8094 bits (81), Expect = 2.164e-37
Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = 2
Query:  473 IVSNASCATSCLAPLAHVMHDK 538
            ++S ASC T+CLAPLA V++DK
Sbjct:  145 VISQASCTTNCLAPLAKVINDK 166          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_RHIMI (Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizomucor miehei GN=GPD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.164e-37
Identity = 78/139 (56.12%), Postives = 94/139 (67.63%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            VK GI GFGRIG +V R  LL  +VE+VA+NDPFI            S HG +K   ++ KD K ++ G KP++V+  R+P  IP    GAEY+VESTGVFT K+KA AHL GGAKKVI+SAPS DAPMFVVGVN   Y
Sbjct:    3 VKAGINGFGRIGRIVLRASLLNPEVEVVAINDPFIDLEYMVYMFKYDSTHGRFKG-TVEAKDGKLVVNG-KPISVYAERDPCCIP-GRIGAEYIVESTGVFTTKEKAGAHLTGGAKKVIISAPSADAPMFVVGVNLESY 138          

HSP 2 Score: 39.6614 bits (91), Expect = 2.164e-37
Identity = 16/31 (51.61%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  464 ELNIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            ++ ++SNASC T+CLAPLA V+ D+ G   G
Sbjct:  141 DMQVISNASCTTNCLAPLAKVIDDEFGIVEG 171          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.164e-37
Identity = 76/139 (54.68%), Postives = 91/139 (65.47%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            VK+GI GFGRIG +V R  +  +DVE+VAVNDPFI            S HG +K  ++KV D   L    K V     ++P  IPW+ETGA YVVESTGVFT  +KA AHL GGAKKV++SAPS DAPMFV+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFKG-DIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFVMGVNHETY 139          

HSP 2 Score: 40.4318 bits (93), Expect = 2.164e-37
Identity = 15/25 (60.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query:  464 ELNIVSNASCATSCLAPLAHVMHDK 538
            ++ ++SN+SC T+CLAPLA V+HDK
Sbjct:  142 DIEVLSNSSCTTNCLAPLAKVIHDK 166          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_DANRE (Glyceraldehyde-3-phosphate dehydrogenase OS=Danio rerio GN=gapdh PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.164e-37
Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTL 476
            VK+GI GFGRIG LV R   L   VE+VA+NDPFI            S HG +K  E+K +  K ++ G   +TV+  R+P  I W + GA YVVESTGVFT  +KA+AH+ GGAK+VI+SAPS DAPMFV+GVN   Y  S T+
Sbjct:    2 VKVGINGFGRIGRLVTRAAFLTKKVEIVAINDPFIDLDYMVYMFQYDSTHGKYKG-EVKAEGGKLVIDGHA-ITVYSERDPANIKWGDAGATYVVESTGVFTTIEKASAHIKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLTV 144          

HSP 2 Score: 38.1206 bits (87), Expect = 2.164e-37
Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  467 LNIVSNASCATSCLAPLAHVMHD 535
            L +VSNASC T+CLAPLA V++D
Sbjct:  142 LTVVSNASCTTNCLAPLAKVIND 164          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.124e-37
Identity = 73/148 (49.32%), Postives = 93/148 (62.84%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKP------VTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            M K K+GI GFGRIG L  R  + +D V++VA+NDPFI            S HG +     K+      L  EK       + VF +++P EI WAE GAEYV+ESTGVFT  +KA+AHL GGAKKV++SAPS DAPM+V+GVN+  Y
Sbjct:    1 MVKPKVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVYMFNYDSTHGRFNG---KISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIESTGVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKY 145          

HSP 2 Score: 42.3578 bits (98), Expect = 8.124e-37
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 2
Query:  458 PPELNIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            P + N++SNASC T+CLAPLA V++D+ G   G
Sbjct:  147 PAKDNVISNASCTTNCLAPLAKVINDEFGIIEG 179          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.058e-36
Identity = 74/143 (51.75%), Postives = 95/143 (66.43%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYH 461
            M   K+GI GFGRIG +V R  +  DD+++VAVNDPFI            S HG +K  ++KV  D   + G+K V  +  R+P  IPWAE+ A YVVESTGVFT  +KA AHL GGAKKV++SAPS DAPM+V+GVN+  Y+
Sbjct:    1 MAPTKVGINGFGRIGRIVFRNAIEHDDIDIVAVNDPFIETEYAAYMLKYDSTHGQFKG-DIKVLSDGLEVNGKK-VKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMYVMGVNNETYN 141          

HSP 2 Score: 38.5058 bits (88), Expect = 1.058e-36
Identity = 15/25 (60.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query:  464 ELNIVSNASCATSCLAPLAHVMHDK 538
            E +++SNASC T+CLAPLA V++D+
Sbjct:  143 EADVISNASCTTNCLAPLAKVINDE 167          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.058e-36
Identity = 74/139 (53.24%), Postives = 92/139 (66.19%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            VK+GI GFGRIG +V R  +   ++E+VAVNDPFI            S HG++K  E+K KD   L+   K V     R+P  IPW  +GAEY+VESTGVFT  +KA AHL GGAKKVI+SAPS DAPM+V+GVN+  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEIEVVAVNDPFIDPEYAAYMLKYDSSHGVFKG-EIK-KDADGLIVNGKKVKFHTERDPSAIPWKASGAEYIVESTGVFTTTEKAKAHLTGGAKKVIISAPSADAPMYVMGVNEKTY 139          

HSP 2 Score: 41.2022 bits (95), Expect = 1.058e-36
Identity = 16/23 (69.57%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  470 NIVSNASCATSCLAPLAHVMHDK 538
            +++SNASC T+CLAPLA V+HDK
Sbjct:  144 DVISNASCTTNCLAPLAKVIHDK 166          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.378e-36
Identity = 75/149 (50.34%), Postives = 98/149 (65.77%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHL-NGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTL 476
            M + K+GI GFGRIG LV R   L++ V++V+VNDPFI            S HG +   E+  ++ K  + G K ++V   R+P  IPW + GAEYVVESTGVFT  DKA AH+ N  AKKVI+SAPS DAPMFVVGVN++ Y +S ++
Sbjct:    1 MSRAKVGINGFGRIGRLVLRAAFLKNTVDVVSVNDPFIDLEYMVYMIKRDSTHGTFPG-EVSTENGKLKVNG-KLISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKVIISAPSADAPMFVVGVNENSYEKSMSV 147          

HSP 2 Score: 42.3578 bits (98), Expect = 1.378e-36
Identity = 17/24 (70.83%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  467 LNIVSNASCATSCLAPLAHVMHDK 538
            +++VSNASC T+CLAPLA V+HDK
Sbjct:  145 MSVVSNASCTTNCLAPLAKVIHDK 168          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.795e-36
Identity = 70/146 (47.95%), Postives = 96/146 (65.75%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSS 470
            M  + +GI GFGRIG LV R  L +  +++VA+NDPFI            S HG +K  E+ ++D K L+  +  ++VF    P EIPW + GA+YVVESTGVF   DKA++H+ GGAK+V++SAPS DAPMFV+GVN+  +  SS
Sbjct:    1 MSDLCVGINGFGRIGRLVLRACLQKG-IKVVAINDPFIDLQYMVYMFKYDSTHGRYKG-EVSMEDGK-LIVDDHSISVFQCMKPHEIPWGKAGADYVVESTGVFLSIDKASSHIQGGAKRVVVSAPSPDAPMFVMGVNEDKFDPSS 143          

HSP 2 Score: 44.2838 bits (103), Expect = 1.795e-36
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  458 PPELNIVSNASCATSCLAPLAHVMHDKCG 544
            P  + IVSNASC T+CLAPLA V+HD  G
Sbjct:  141 PSSMTIVSNASCTTNCLAPLAKVIHDNFG 169          
The following BLAST results are available for this feature:
BLAST of EY735650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 324
Match NameE-valueIdentityDescription
G3P_COCHE1.275e-3753.24Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_COLLN2.164e-3751.35Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_RHIMI2.164e-3756.12Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizom... [more]
G3P_CURLU2.164e-3754.68Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3P_DANRE2.164e-3751.72Glyceraldehyde-3-phosphate dehydrogenase OS=Danio ... [more]
G3P1_GLORO8.124e-3749.32Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragme... [more]
G3P_SCLSC1.058e-3651.75Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_CLAPU1.058e-3653.24Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]
G3P_SCHMA1.378e-3650.34Glyceraldehyde-3-phosphate dehydrogenase OS=Schist... [more]
G3P_ONCMY1.795e-3647.95Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorh... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-C06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735650 ID=EY735650; Name=EY735650; organism=Citrus sinensis; type=EST; length=861bp
CTTGCACCGGTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATC
GGAATCTACGGATTCGGAAGAATTGGTACGCTGGTGGCAAGAGTCATCTT
GCTGAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAA
CCGATTACATGACATACATGTATAAGTACGACAGTGTTCACGGTCTATGG
AAGCACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGA
GAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGATCCCATGGG
CTGAGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGAC
AAGGATAAGGCTGCTGCCCATTTGAACGGTGGTGCTAAAAAAGTTATCCT
CTCAGCCCCCAGCAACGATGCTCCTATGTTTGTTGTGGGTGTCAATGACC
ACGACTACCACCAGAGCTCAACATTGTGTCCAATGCTAGCTGCGCCACCA
GCTGCCTTGCTCCCCTTGCTCATGTCATGCATGACAAGTGTGGGCATTGT
CGAGGGTCGTCATACCCGCTGGTCACTCTGCGTCGCGCGACCCCACCACC
CCTGCCGGGCCCCTCGCTGGCGGGATCGGCTGACGTGGAGGGGCGGGTTG
CGGCCAGCGCTCGGGCCATCGCCTGTTGGTTCTGTTCGTGGTTTGGAGAG
GGGGGGTTGCTGCTGTGGTTGTTCTCGGGGGGGGTGGTGCTGGGTGCCCT
CCCTCCCCTTCCTCTCCGCGCAACGCGTCCGTCTCCCTCGCCGTGCCCGC
GGTCGTTCCTCCGCCCCGCCCGGGCCTCCCCCCAGGCGCTCGGGCGGTGG
GCGGCGGGCCG
back to top