EY735640

Overview
NameEY735640
Unique NameEY735640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: GIT2_HUMAN (ARF GTPase-activating protein GIT2 OS=Homo sapiens GN=GIT2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.890e-18
Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  312 RDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYE------AFIPEGVSKPGP-DSSHEIRSKFIRSKYELQEFLKPSLRIASXKPSASLQSSFSRKIIDSFRSTN 722
            R + +CADC  PDP WAS N G F+C +CC VHRSLG H+S+V  +    W    +  M+E   N+ AN+I+E      A I  G  K  P D  H  +++FIR+KY++  F+    R+      +      S+++  S R+ N
Sbjct:    6 RSSEVCADCSGPDPSWASVNRGTFLCDECCSVHRSLGRHISQVRHLKHTPWPPTLLQ-MVETLYNNGANSIWEHSLLDPASIMSGRRKANPQDKVHPNKAEFIRAKYQMLAFVH---RLPCRDDDSVTAKDLSKQLHSSVRTGN 145          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: YC8E_SCHPO (Uncharacterized protein C622.14 OS=Schizosaccharomyces pombe GN=SPCC622.14 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.666e-18
Identity = 58/145 (40.00%), Postives = 82/145 (56.55%), Query Frame = 3
Query:  288 RLKDLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEA---FIPEGV--SKPGPDSSHEIRSKFIRSKYELQEFLKPSLRIASXKPSASLQSSFSRKIIDS 707
            +L  L    +N+ C DC AP+P+WAS N+G+FICL C G HR LG   S V S+T+D+WS+ +V  M+EVGGNS+A         F   G    K   D + ++R K IR++ +  E++K   R  S    AS+ SS +   I S
Sbjct:    4 KLDQLTRLPENKKCFDCDAPNPQWASCNLGIFICLDCSGQHRGLGVEKSFVRSITMDNWSERQV-KMMEVGGNSNAKTFLSTDPMFSAAGSIREKYNTDIAEDLRQK-IRAEVDGVEWVKVD-RPKSVSSHASVTSSSTVPTIPS 145          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: AGD2_ARATH (ADP-ribosylation factor GTPase-activating protein AGD2 OS=Arabidopsis thaliana GN=AGD2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.293e-17
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLD--DWSDDEVDAMIEVGGNSSANAIYEAFIPE--------------GVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRIASXKPSASL-QSSFSRKIIDSFR 713
            N  CA+C APDP WAS N+GV +C++C GVHR+LG H+SKV S+TLD   W    +D    + GN   N+++E  +                 VSKP  +    ++ K+I  KY  +  +    R A+   S+ + ++  SR I D +R
Sbjct:  479 NNTCAECNAPDPDWASLNLGVLMCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFRNL-GNGYCNSVWEELLHHLDDDSEKGSTDTLASVSKPSSEDWFTLKEKYINGKYLEKALVVKDEREANSTASSRIWEAVQSRNIRDIYR 626          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARAP3_HUMAN (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=ARAP3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.301e-17
Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  312 RDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDD--WSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKP 635
            R NR CADCG+  P WA+ N+GV IC +C G HR+LG+ +SKV S+ LD   WS++ V   I V GN  AN  +   +P G     PD++   R +FI  KY L  F KP
Sbjct:  499 RANRQCADCGSSRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSNEIVQLFI-VLGNDRANRFWAGTLPPGEGL-HPDATPGPRGEFISRKYRLGLFRKP 606          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ASAP2_HUMAN (Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=ASAP2 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 5.617e-17
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIP-EGVSKPGPDSSHEIRSKFIRSKY 611
            N +C DCGAPDP W S N+G+  C++C G+HR LG H S++ S+TLD     E+  + +  GN+  N I E  +P E   KP P S    R  +I +KY
Sbjct:  433 NDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSEL-LLAKNIGNAGFNEIMECCLPAEDSVKPNPGSDMNARKDYITAKY 530          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARAP3_MOUSE (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 OS=Mus musculus GN=Arap3 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.336e-17
Identity = 51/111 (45.95%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDD--WSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLR 644
            NR CADC A  P WA+ N+GV IC +C G HR+LG+ +SKV S+ LD   WS++ V   I V GN  AN  +   +P G     PDS+   R +FI  KY+L  F KP  R
Sbjct:  496 NRHCADCRASRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSNEIVQLFI-VLGNDRANCFWAGALPPGEGL-HPDSAPGPRGEFISRKYKLGLFRKPHPR 604          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ASAP3_HUMAN (Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=ASAP3 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.581e-17
Identity = 55/160 (34.38%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  216 SWAMSMRNNNNRPLE---LGKPSSGKGR------------LKDLLLQR-----DNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIP-EGVSKPGPDSSHEIRSKFIRSKYELQEFLK 632
            +W   ++N+ +  L    LG+PS+G G             L  LL+        N  C DCGA DP W S N+GV  C++C GVHR LG   S++ S+TLD     E+   + + GN+S N + EA +P  G  KP  +S    R  +I +KY    F +
Sbjct:  384 AWVSVLQNSKDEALSSAFLGEPSAGPGSWGSAGHDGEPHDLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLALNM-GNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFAR 542          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: AGD4_ARATH (ADP-ribosylation factor GTPase-activating protein AGD4 OS=Arabidopsis thaliana GN=AGD4 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.581e-17
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLD--DWSDDEVDAMIEVGGNSSANAIYE-------------AFIPEGVSKPGPDSSHEIRSKFIRSKY 611
            N  CA+C AP+P WAS N+GV +C++C GVHR+LG H+SKV S++LD   W    +D    + GN   N+++E             A     VSKP P+ S  ++ K+I  KY
Sbjct:  479 NNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLSLDVKVWEPTILDLFRNL-GNVYCNSLWEGLLHLDDDCEDGSALSHASVSKPCPEDSFSVKEKYILGKY 590          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ASAP2_MOUSE (Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 OS=Mus musculus GN=Asap2 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.251e-16
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIP-EGVSKPGPDSSHEIRSKFIRSKY 611
            N +C DCGAPDP W S N+G+  C++C G+HR LG H S++ S+TLD     E+  + +  GN+  N I E  +P E   KP P S    R  +I +KY
Sbjct:  436 NDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSEL-LLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKY 533          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: AGD3_ARATH (ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.634e-16
Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLD--DWSDDEVDAMIEVGGNSSANAIYEAFIPEG-------------------VSKPGPDSSHEIRSKFIRSKYELQEFLKPS 638
            N  CADCGAP+P WAS N+GV +C++C GVHR+LG H+SKV S+TLD   W +  V ++ +  GN+ AN ++E  +                        KP       I+ K+I++KY  + F++ S
Sbjct:  513 NDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVW-EPSVISLFQALGNTFANTVWEELLHSRSAIHFDPGLTVSDKSRVMVTGKPSYADMISIKEKYIQAKYAEKLFVRRS 639          
The following BLAST results are available for this feature:
BLAST of EY735640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GIT2_HUMAN3.890e-1836.11ARF GTPase-activating protein GIT2 OS=Homo sapiens... [more]
YC8E_SCHPO8.666e-1840.00Uncharacterized protein C622.14 OS=Schizosaccharom... [more]
AGD2_ARATH3.293e-1734.90ADP-ribosylation factor GTPase-activating protein ... [more]
ARAP3_HUMAN4.301e-1745.45Arf-GAP with Rho-GAP domain, ANK repeat and PH dom... [more]
ASAP2_HUMAN5.617e-1742.42Arf-GAP with SH3 domain, ANK repeat and PH domain-... [more]
ARAP3_MOUSE7.336e-1745.95Arf-GAP with Rho-GAP domain, ANK repeat and PH dom... [more]
ASAP3_HUMAN9.581e-1734.38Arf-GAP with SH3 domain, ANK repeat and PH domain-... [more]
AGD4_ARATH9.581e-1739.82ADP-ribosylation factor GTPase-activating protein ... [more]
ASAP2_MOUSE1.251e-1642.42Arf-GAP with SH3 domain, ANK repeat and PH domain-... [more]
AGD3_ARATH1.634e-1636.72ADP-ribosylation factor GTPase-activating protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-B06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735640 ID=EY735640; Name=EY735640; organism=Citrus sinensis; type=EST; length=790bp
CACGCGTCCGAAAAAACCTCTTTTCTCTCTGTTTTTTCGCTCCCAGTTGA
AGAACCACACATTTCAATTCACAGTGGAATTATTTTTCGTGATTTTCATT
TGTGGAAGAGTTACAATCACCCTTCATTTTCTTGGCAATCAAACAAATAG
TTCCCCTACTTCCTTTTTTGGGCTTCTCTGTGAATATAGTCCTTTTTGAA
TGACTGTTGCTTGCAAGTTGGGCAATGAGTATGCGTAATAATAATAACCG
TCCATTGGAACTTGGCAAACCTTCCTCGGGTAAAGGAAGGTTAAAGGATT
TATTGCTTCAACGGGATAATCGCATTTGTGCTGATTGTGGTGCTCCAGAT
CCTAAATGGGCGTCAGCAAATATCGGAGTGTTTATATGCTTAAAATGTTG
TGGCGTGCACAGAAGCCTCGGTACGCATGTCTCGAAGGTTTTGTCTGTGA
CATTGGATGACTGGTCTGATGATGAAGTTGATGCCATGATTGAAGTTGGA
GGAAATTCATCTGCTAATGCAATTTATGAGGCTTTTATACCCGAAGGTGT
TTCAAAGCCTGGACCAGATTCCAGTCATGAGATACGTTCGAAGTTTATCA
GGTCTAAGTATGAACTTCAAGAATTTTTGAAACCTAGCTTGCGGATTGCA
TCANGAAAGCCTTCTGCCTCTCTCCAATCAAGTTTTTCTCGAAAAATTAT
AGATAGCTTTCGAAGTACAAACTCATCGCAGAAAAAAGACGTAGGCATGG
TAGAGTTTATCGGGCTTATTGAAAGTCAAAGTTGGTAAAG
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