EY735640

Overview
NameEY735640
Unique NameEY735640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARFG1_RAT (ADP-ribosylation factor GTPase-activating protein 1 OS=Rattus norvegicus GN=Arfgap1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3
Query:  291 LKDLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEA 533
            LK++  Q +N +C +CGA +P+W S   G++ICL+C G HR LG H+S V SVT+D W D E++ M + GGN+      EA
Sbjct:   10 LKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKM-KAGGNAKFREFLEA 89          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARFG1_HUMAN (ADP-ribosylation factor GTPase-activating protein 1 OS=Homo sapiens GN=ARFGAP1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.082e-15
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 3
Query:  291 LKDLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEA 533
            LK++ +Q +N +C +CGA +P+W S   G++ICL+C G HR LG H+S V SVT+D W D E++ M + GGN+      E+
Sbjct:   10 LKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKM-KAGGNAKFREFLES 89          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARFG1_MOUSE (ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus GN=Arfgap1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 3
Query:  291 LKDLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYE 530
            LK++  Q +N +C +CGA +P+W S   G++ICL+C G HR LG H+S V SVT+D W D E++ M + GGN+      E
Sbjct:   10 LKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKM-KAGGNAKFREFLE 88          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: AGD9_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD9 OS=Arabidopsis thaliana GN=AGD9 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.171e-14
Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  294 KDLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAF-------IPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSL-RIASXKPSASLQSSFSRKIIDSFRSTNSSQKKDVGMV 752
            + L  + +N++C DC A +P WAS   G+F+C+ C  VHRSLG H+S V S  LD WS +++  M+  GGN+ A   ++         I    +    D   +  +K + +K   +E + PSL  +A+ +P  S ++ F+     S     SS K++  +V
Sbjct:   14 RKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLRTMM-FGGNNRAQVFFKQHGWNDGGKIEAKYTSRAADMYRQTLAKEV-AKAMAEETVLPSLSSVATSQPVESSENGFT-----SESPKESSLKQEAAVV 167          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: CSX2_SCHPO (Protein csx2 OS=Schizosaccharomyces pombe GN=csx2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14
Identity = 51/153 (33.33%), Postives = 82/153 (53.59%), Query Frame = 3
Query:  228 SMRNNNNRPLELGKPSSGKGRLKDLLLQRDNRICADCGAPDP-KWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRIASXKPSASLQSS 683
            S  N++++  +  K  S    LK++     ++ CADC      +W + N  V +C+ C G+HRSLGTH++K+ S+TLD ++ + VD ++   GNS  N IYE  I +   K     + E R +F++ KY  + F+K S    S  P+  L  S
Sbjct:  655 SRHNSDSKEKKQTKSPSLVKTLKEM--HSSDQSCADCNTTARVEWCAINFPVVLCIDCSGIHRSLGTHITKIRSLTLDKFNPETVD-LLYATGNSFVNEIYEGGITDWKIK--NFENQERRVQFVKDKYLYKRFIKSSF---SHDPNTGLLES 799          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARAP2_HUMAN (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=ARAP2 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDD--WSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSL 641
            NR CADC APDP WAS N+ V IC KC G HRSLG   SKV S+ +D   WS++ ++  I + GN  AN  +   + +   +   DS  E R  FI  KY+  +F K  L
Sbjct:  697 NRSCADCKAPDPDWASINLCVVICKKCAGQHRSLGPKDSKVRSLKMDASIWSNELIELFIVI-GNKRANDFWAGNLQKD-EELHMDSPVEKRKNFITQKYKEGKFRKTLL 804          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARFG2_XENTR (ADP-ribosylation factor GTPase-activating protein 2 OS=Xenopus tropicalis GN=arfgap2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.609e-14
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLD-DWSDDEVDAMIEVGGNSSANAIY 527
            N+ C DCGA +P WAS   GVF+C+ C GVHRSLG H+S + S  LD +WS  ++  M +VGGN+SANA +
Sbjct:   23 NKSCFDCGAKNPSWASIPYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWFQLRCM-QVGGNASANAFF 92          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARAP1_HUMAN (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=ARAP1 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.609e-14
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDD--WSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKY 611
            NR CADCGAP P WAS N+ V IC +C G HR LG  VSKV S+ +D   W++  ++  +++ GN + N  + A +P   +   P SS   R   + +KY
Sbjct:  547 NRFCADCGAPQPDWASINLCVVICKRCAGEHRGLGAGVSKVRSLKMDRKVWTETLIELFLQL-GNGAGNRFWAANVPPSEALQ-PSSSPSTRRCHLEAKY 644          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: GCS1_YEAST (ADP-ribosylation factor GTPase-activating protein GCS1 OS=Saccharomyces cerevisiae GN=GCS1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.813e-14
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGN 506
            N+ C DCGAP+P+WA+   G FICL+C G+HR LG H+S V S+T+D +  +E+  M E GGN
Sbjct:   23 NKKCMDCGAPNPQWATPKFGAFICLECAGIHRGLGVHISFVRSITMDQFKPEELLRM-EKGGN 84          
BLAST of EY735640 vs. ExPASy Swiss-Prot
Match: ARAP2_MOUSE (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 OS=Mus musculus GN=Arap2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.813e-14
Identity = 47/110 (42.73%), Postives = 61/110 (55.45%), Query Frame = 3
Query:  318 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDD--WSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSL 641
            NR CADC APDP WAS N+ V IC KC G HRSLG    KV S+ +D   WS++ ++  I + GN  AN  +   + +   +   DS  E R  FI  KY+  +F K  L
Sbjct:  695 NRSCADCKAPDPDWASINLCVVICKKCAGQHRSLGPKDCKVRSLKMDASIWSNELIELFIVI-GNKRANDFWAGNLQKD-EELQVDSPVEKRKNFITQKYKEGKFRKTLL 802          
The following BLAST results are available for this feature:
BLAST of EY735640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
ARFG1_RAT2.360e-1545.68ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG1_HUMAN3.082e-1544.44ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG1_MOUSE6.866e-1545.00ADP-ribosylation factor GTPase-activating protein ... [more]
AGD9_ARATH1.171e-1431.06Probable ADP-ribosylation factor GTPase-activating... [more]
CSX2_SCHPO1.530e-1433.33Protein csx2 OS=Schizosaccharomyces pombe GN=csx2 ... [more]
ARAP2_HUMAN1.530e-1443.64Arf-GAP with Rho-GAP domain, ANK repeat and PH dom... [more]
ARFG2_XENTR2.609e-1453.52ADP-ribosylation factor GTPase-activating protein ... [more]
ARAP1_HUMAN2.609e-1441.00Arf-GAP with Rho-GAP domain, ANK repeat and PH dom... [more]
GCS1_YEAST5.813e-1452.38ADP-ribosylation factor GTPase-activating protein ... [more]
ARAP2_MOUSE5.813e-1442.73Arf-GAP with Rho-GAP domain, ANK repeat and PH dom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-B06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735640 ID=EY735640; Name=EY735640; organism=Citrus sinensis; type=EST; length=790bp
CACGCGTCCGAAAAAACCTCTTTTCTCTCTGTTTTTTCGCTCCCAGTTGA
AGAACCACACATTTCAATTCACAGTGGAATTATTTTTCGTGATTTTCATT
TGTGGAAGAGTTACAATCACCCTTCATTTTCTTGGCAATCAAACAAATAG
TTCCCCTACTTCCTTTTTTGGGCTTCTCTGTGAATATAGTCCTTTTTGAA
TGACTGTTGCTTGCAAGTTGGGCAATGAGTATGCGTAATAATAATAACCG
TCCATTGGAACTTGGCAAACCTTCCTCGGGTAAAGGAAGGTTAAAGGATT
TATTGCTTCAACGGGATAATCGCATTTGTGCTGATTGTGGTGCTCCAGAT
CCTAAATGGGCGTCAGCAAATATCGGAGTGTTTATATGCTTAAAATGTTG
TGGCGTGCACAGAAGCCTCGGTACGCATGTCTCGAAGGTTTTGTCTGTGA
CATTGGATGACTGGTCTGATGATGAAGTTGATGCCATGATTGAAGTTGGA
GGAAATTCATCTGCTAATGCAATTTATGAGGCTTTTATACCCGAAGGTGT
TTCAAAGCCTGGACCAGATTCCAGTCATGAGATACGTTCGAAGTTTATCA
GGTCTAAGTATGAACTTCAAGAATTTTTGAAACCTAGCTTGCGGATTGCA
TCANGAAAGCCTTCTGCCTCTCTCCAATCAAGTTTTTCTCGAAAAATTAT
AGATAGCTTTCGAAGTACAAACTCATCGCAGAAAAAAGACGTAGGCATGG
TAGAGTTTATCGGGCTTATTGAAAGTCAAAGTTGGTAAAG
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