EY735626

Overview
NameEY735626
Unique NameEY735626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735626 vs. ExPASy Swiss-Prot
Match: VA0D2_DROME (Probable V-type proton ATPase subunit d 2 OS=Drosophila melanogaster GN=CG4624 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.849e-41
Identity = 82/203 (40.39%), Postives = 126/203 (62.07%), Query Frame = 2 
Query:   77 AMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTL-KLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYEAYVAELYRFCRNWGGGPAEI 682
            +M FN   GYLEA+ RG++ G+L  +DY NL QCE+L+D+ + +  T+YG     E S   +  ++E+C   +L+ +Y ++   +TEPL+TF+E+I Y  MIDNV L+V G  + R ++ LL  CHPLG FD +  + VA N  EL+  VL+DTP+A +    +  E L  +++EI+R  LY AY+ + Y +C   GG  A +
Sbjct:    2 SMIFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSA-PSVEVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLRMCHPLGEFDQLGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYCSQLGGNTANV 203
The following BLAST results are available for this feature:
BLAST of EY735626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
VA0D2_DROME2.849e-4140.39Probable V-type proton ATPase subunit d 2 OS=Droso... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-H12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735626 ID=EY735626; Name=EY735626; organism=Citrus sinensis; type=EST; length=855bp
CCACGCGTCCGAGATCACATCACAACGAACAAACAATCGCACCGCTCTCT
CCTTCGCGAAGATGTACGGGTTCGAAGCGATGACGTTTAACATACACGGC
GGATACTTGGAGGCGATCGTGAGGGGCTACCGTGCGGGGCTCTTGACGGC
CGCCGATTACAACAATTTGTGCCAGTGCGAAACACTTGACGACATCAAGA
TGCACCTCTCCGCCACCGAATATGGTCCTTACCTCCAAAACGAACCTTCC
CCATTGCATACTACTACAATTGTGGAGAAATGCACTCTGAAACTGGTTGA
TGAGTATAAGCACATGCTGTGCCAAGCCACTGAGCCCCTGTCAACATTTT
TAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCTTGATTGTT
ACTGGAACCTTGCATGAGAGAGATGTTCAAGAACTGTTGGAGAAATGTCA
CCCTTTGGGCATGTTTGACAGCATTGCTACACTGGCGGTTGCTCAGAACA
TGCGGGAGCTTTATAGATTGGTGCTTGTTGATACACCATTAGCACCATAC
TTTTCTGAATGTATCACATCAGAGGACTTGGATGACATGAACATTGAAAT
AATGAGGAATACTCTCTACGAGGCATACGTAGCAGAGCTTTACAGGTTTT
GTCGGAACTGGGGTGGTGGACCGGCCGAGATCGCGTCGGAGCGCTGAGCG
TTGCGGGGCCGGCGGAGGAGCGGGCGCGGTGGCGGAGCCGGGGTGGGCCT
GGAGCCCCCCGGGATNATGGGGGGGGGTGTACCCCGGCGGGGGGTGCGGG
GGTCCGAGTGGTCTGAGGGACGGGCCGGGCGTGNAGGATCTGGGGGGCGT
GGGGG
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