EY735605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.506e-58 Identity = 101/145 (69.66%), Postives = 122/145 (84.14%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKP 447 SAFP T+KT ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE E KEYP +F+R+IGFDN RQVQC+SF+ KP Sbjct: 35 SAFPVTQKTVTGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS3_FRIAG (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.712e-57 Identity = 100/145 (68.97%), Postives = 121/145 (83.45%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKP 447 SAFP T+K ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE E KEYP +F+R+IGFDN RQVQC+SF+ KP Sbjct: 35 SAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS5_FRIAG (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Fritillaria agrestis GN=RBCS5 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.236e-57 Identity = 100/145 (68.97%), Postives = 121/145 (83.45%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKP 447 SAFP T+KT ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCT A QV+KE E KEYP +F+R+IGFDN RQVQC+SF+ KP Sbjct: 35 SAFPVTQKTATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTGAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS2_WHEAT (Ribulose bisphosphate carboxylase small chain PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.236e-57 Identity = 99/147 (67.35%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453 + P + ++ + S SNGGR++CM+VWP G+KKFETLSYLPPLS EALLK++ YL+RS W+PCLEF + G+V+REH+SSPGYYDGRYWTMWKLPM+GCTDATQVL EV EV KEYP ++VR+IGFDN RQVQC+SF+A +PPG Sbjct: 23 AGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRPPG 168
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS1_FRIAG (Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic OS=Fritillaria agrestis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.815e-57 Identity = 99/145 (68.28%), Postives = 121/145 (83.45%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKP 447 SAFP T+K ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE E KEYP +F+R+IGFDN RQVQC+SF+ +P Sbjct: 35 SAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVERP 178
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS1_WHEAT (Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 4.982e-57 Identity = 98/147 (66.67%), Postives = 124/147 (84.35%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453 + P ++++ + S+ SNGGR++CM+VWP G+KKFETLSYLPPLS EAL K++ YL+RS W+PCLEF + G+V+REH+SSPGYYDGRYWTMWKLPM+GCTDATQVL EV EV KEYP ++VR+IGFDN RQVQC+SF+A +PPG Sbjct: 23 AGLPVSRRSRGSLGSV-SNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRPPG 167
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSJ (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.194e-56 Identity = 100/147 (68.03%), Postives = 118/147 (80.27%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453 + P +++ N SNGGR++CM+VWP G+KKFETLSYLPPL+ E LLK+I YLLRS W+PCLEF + G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVLKE+ E K YP +FVRIIGFDN RQVQ ISF+A KPPG Sbjct: 23 AGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 7.194e-56 Identity = 100/147 (68.03%), Postives = 118/147 (80.27%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453 + P +++ N SNGGR++CM+VWP G+KKFETLSYLPPL+ E LLK+I YLLRS W+PCLEF + G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVLKE+ E K YP +FVRIIGFDN RQVQ ISF+A KPPG Sbjct: 23 AGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS2_ORYSJ (Ribulose bisphosphate carboxylase small chain A, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS-A PE=2 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 9.396e-56 Identity = 100/147 (68.03%), Postives = 119/147 (80.95%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453 + P ++++ N SNGGR++CM+VWP G+KKFETLSYLPPL+ E LLK+I YLLRS W+PCLEF + G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVLKE+ E K YP +FVRIIGFDN RQVQ ISF+A KPPG Sbjct: 23 AGLPVSRRSTNSGFGNVSNGGRIKCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS_ZANAE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.772e-54 Identity = 100/147 (68.03%), Postives = 119/147 (80.95%), Query Frame = 1 Query: 13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453 +AFP T+K D + + SNG RV+CM+VWPP G KKFETLSYLPPL+ E L +E+ YL+R+GWIPC+EF + G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTD++QVLKEV E K YP F RIIGFDN RQVQCISFL KP G Sbjct: 33 AAFPVTRKFA-DSSKLPSNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEF-CKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKPEG 177 The following BLAST results are available for this feature:
BLAST of EY735605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735605 ID=EY735605; Name=EY735605; organism=Citrus sinensis; type=EST; length=868bpback to top |