EY735605

Overview
NameEY735605
Unique NameEY735605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.506e-58
Identity = 101/145 (69.66%), Postives = 122/145 (84.14%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKP 447
            SAFP T+KT   ++++ SNGGRVQCMKVWP  GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE  E  KEYP +F+R+IGFDN RQVQC+SF+  KP
Sbjct:   35 SAFPVTQKTVTGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS3_FRIAG (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.712e-57
Identity = 100/145 (68.97%), Postives = 121/145 (83.45%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKP 447
            SAFP T+K    ++++ SNGGRVQCMKVWP  GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE  E  KEYP +F+R+IGFDN RQVQC+SF+  KP
Sbjct:   35 SAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS5_FRIAG (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Fritillaria agrestis GN=RBCS5 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.236e-57
Identity = 100/145 (68.97%), Postives = 121/145 (83.45%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKP 447
            SAFP T+KT   ++++ SNGGRVQCMKVWP  GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCT A QV+KE  E  KEYP +F+R+IGFDN RQVQC+SF+  KP
Sbjct:   35 SAFPVTQKTATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTGAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS2_WHEAT (Ribulose bisphosphate carboxylase small chain PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.236e-57
Identity = 99/147 (67.35%), Postives = 123/147 (83.67%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453
            +  P + ++ +   S  SNGGR++CM+VWP  G+KKFETLSYLPPLS EALLK++ YL+RS W+PCLEF  + G+V+REH+SSPGYYDGRYWTMWKLPM+GCTDATQVL EV EV KEYP ++VR+IGFDN RQVQC+SF+A +PPG
Sbjct:   23 AGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRPPG 168          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS1_FRIAG (Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic OS=Fritillaria agrestis GN=RBCS1 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.815e-57
Identity = 99/145 (68.28%), Postives = 121/145 (83.45%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKP 447
            SAFP T+K    ++++ SNGGRVQCMKVWP  GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE  E  KEYP +F+R+IGFDN RQVQC+SF+  +P
Sbjct:   35 SAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVERP 178          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS1_WHEAT (Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.982e-57
Identity = 98/147 (66.67%), Postives = 124/147 (84.35%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453
            +  P ++++   + S+ SNGGR++CM+VWP  G+KKFETLSYLPPLS EAL K++ YL+RS W+PCLEF  + G+V+REH+SSPGYYDGRYWTMWKLPM+GCTDATQVL EV EV KEYP ++VR+IGFDN RQVQC+SF+A +PPG
Sbjct:   23 AGLPVSRRSRGSLGSV-SNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRPPG 167          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSJ (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.194e-56
Identity = 100/147 (68.03%), Postives = 118/147 (80.27%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453
            +  P  +++ N      SNGGR++CM+VWP  G+KKFETLSYLPPL+ E LLK+I YLLRS W+PCLEF  + G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVLKE+ E  K YP +FVRIIGFDN RQVQ ISF+A KPPG
Sbjct:   23 AGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 7.194e-56
Identity = 100/147 (68.03%), Postives = 118/147 (80.27%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453
            +  P  +++ N      SNGGR++CM+VWP  G+KKFETLSYLPPL+ E LLK+I YLLRS W+PCLEF  + G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVLKE+ E  K YP +FVRIIGFDN RQVQ ISF+A KPPG
Sbjct:   23 AGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS2_ORYSJ (Ribulose bisphosphate carboxylase small chain A, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS-A PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 9.396e-56
Identity = 100/147 (68.03%), Postives = 119/147 (80.95%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453
            +  P ++++ N      SNGGR++CM+VWP  G+KKFETLSYLPPL+ E LLK+I YLLRS W+PCLEF  + G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVLKE+ E  K YP +FVRIIGFDN RQVQ ISF+A KPPG
Sbjct:   23 AGLPVSRRSTNSGFGNVSNGGRIKCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168          
BLAST of EY735605 vs. ExPASy Swiss-Prot
Match: RBS_ZANAE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.772e-54
Identity = 100/147 (68.03%), Postives = 119/147 (80.95%), Query Frame = 1
Query:   13 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVXKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 453
            +AFP T+K   D + + SNG RV+CM+VWPP G KKFETLSYLPPL+ E L +E+ YL+R+GWIPC+EF  + G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTD++QVLKEV E  K YP  F RIIGFDN RQVQCISFL  KP G
Sbjct:   33 AAFPVTRKFA-DSSKLPSNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEF-CKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKPEG 177          
The following BLAST results are available for this feature:
BLAST of EY735605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
RBS2_FRIAG4.506e-5869.66Ribulose bisphosphate carboxylase small chain 2, c... [more]
RBS3_FRIAG1.712e-5768.97Ribulose bisphosphate carboxylase small chain 3, c... [more]
RBS5_FRIAG2.236e-5768.97Ribulose bisphosphate carboxylase small chain 5, c... [more]
RBS2_WHEAT2.236e-5767.35Ribulose bisphosphate carboxylase small chain PW9,... [more]
RBS1_FRIAG3.815e-5768.28Ribulose bisphosphate carboxylase small chain 1/4,... [more]
RBS1_WHEAT4.982e-5766.67Ribulose bisphosphate carboxylase small chain PWS4... [more]
RBS1_ORYSJ7.194e-5668.03Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS1_ORYSI7.194e-5668.03Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS2_ORYSJ9.396e-5668.03Ribulose bisphosphate carboxylase small chain A, c... [more]
RBS_ZANAE1.772e-5468.03Ribulose bisphosphate carboxylase small chain, chl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735605 ID=EY735605; Name=EY735605; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGTTCTGCTTTCCCAGCAACCAAGAAGACCAACAATGACAT
TACTTCCATTGCAAGCAACGGCGGAAGAGTCCAATGCATGAAGGTGTGGC
CACCAACTGGCTTGAAGAAGTTCGAGACTCTCTCATACCTCCCGCCACTG
TCCGATGAAGCTTTGCTCAAGGAAATCAGTTACCTTCTCCGCTCCGGCTG
GATTCCCTGCTTGGAATTCGAGTTGGAGAAAGGATGGGTGTACCGTGAGC
ACCACAGCTCACCAGGATACTACGATGGACGCTACTGGACAATGTGGAAG
CTGCCCATGTATGGGTGCACAGATGCAACCCAGGTTTTGAAGGAGGTTGG
GGAGGTCCANAAGGAATACCCACATTCATTCGTCCGAATTATCGGATTTG
ACAACAAGCGTCAAGTGCAGTGCATCAGTTTCCTTGCTGCCAAGCCACCA
GGCGTCTAGGTTCCCAATTAAATTTGTGTAACCACCCATGCAATATTGTT
GATTATTATTATGTGTAACCCCCATAATGATCATTCGATCAATGGGGGTT
CGGTTTGCGTTTAATTTGTACTTAGGCTGCTGTTGCTGCTGCTCAAACTT
TTTTGGTTTGCTCCCCGACTTTGGCTTTTTTTTTTTATATATATTTTAAT
AGTTGAACAAGAGCCATGCCGCGCGGGCCAGGCGGGCCGAGGAGGGGGCA
CCGTAGCGGAGCTCGACCACGAAAAAAAACTGGGGGGGGCCTTCCAAGAA
GAAACACACGTGCTTGGGCGGCGGGTGAAGGGCGGTAGGCTTTCAATAGT
GGCGCCCCGAAAGGAGGTCCCGGCGGCTCGTTATCCACGCTGGGGCAGGG
AGAAACCTGGGCCTCCGC
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