EY735597

Overview
NameEY735597
Unique NameEY735597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.882e-18
Identity = 43/81 (53.09%), Postives = 61/81 (75.31%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEK 272
            +P P+E+ RL+ILKIH+R+MNL   ++L++IA+   G  GAELKA+CTEAGM A+RE R +VT +DF  AV  +M+K+  K
Sbjct:  338 VPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK 418          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLW 296
            IP P+EE R +I KIH+R MNL   +DL+K+A+   GASGA++KA+CTEAGM A+RE R  VT +DF  AV  VM K+ E++   ++ +
Sbjct:  347 IPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKEEESGEFKRAY 435          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKE 263
            +P P+   RL+ILK+H+R+MNL R +DL  IA+   GASGA+LKA+ TEAGMFA+R+RR +VTQEDF  AV  V+  E
Sbjct:  306 VPLPDFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLGAE 382          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKET 266
            +P P  E R+ I KIH+R+M L   +D K++A    GASGA++KA+CTEAGMFA+RE R  VT  DF  A+  V+KK T
Sbjct:  309 VPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKKTT 387          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.848e-16
Identity = 40/88 (45.45%), Postives = 63/88 (71.59%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKL 293
            I  P+E+ RLDILKIH+ +MNL +G+DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF+ A++ +  K+ + +  + +L
Sbjct:  316 ISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCSYDMPQL 402          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.025e-15
Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEK 272
            +P PNE+ R +ILKIH+  M L   +D++ +A   +GASGA+LKA+CTEAGMFA+R+ R  VT  DF  AV  +M  E E+
Sbjct:  319 VPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIMGVEKEE 399          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.748e-15
Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKL 293
            I  P+E+ RLDILKIH+ +MNL +G+DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF  A+  +  K+ + +  + +L
Sbjct:  316 ISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKEKCSYDMPQL 402          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.895e-15
Identity = 39/88 (44.32%), Postives = 62/88 (70.45%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKL 293
            I  P+E+ RL+ILKIH+ +MNL +G+DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF  A++ +  K+ + +  + +L
Sbjct:  316 ISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEKCSYDMPQL 402          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.133e-14
Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKL 293
            I  P+E+ RL+ILKIH+ +MNL + +DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF+ A++ +  K+ + +  + +L
Sbjct:  316 ISMPDEDGRLEILKIHTEKMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCSYDMPQL 402          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 1.933e-14
Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 3
Query:   27 LIPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNM 278
            L  NP+  ++  IL IH+ +MNL   ++L+ +    +  SGA+++A+CTEAG+ ALRERR+ VT EDF+ A   VMK + E+N+
Sbjct:  349 LFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENL 432          
The following BLAST results are available for this feature:
BLAST of EY735597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PSMR_METJA2.882e-1853.09Proteasome-activating nucleotidase OS=Methanocaldo... [more]
PSMR_METKA3.764e-1850.56Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PSMR_THEGJ3.186e-1757.69Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_ARCFU3.186e-1751.90Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PSMR_METM67.848e-1645.45Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METTH1.025e-1550.62Proteasome-activating nucleotidase OS=Methanobacte... [more]
PSMR_METM51.748e-1545.45Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METMP3.895e-1544.32Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM71.133e-1443.18Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS4_YEAST1.933e-1444.0526S protease regulatory subunit 4 homolog OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-F03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735597 ID=EY735597; Name=EY735597; organism=Citrus sinensis; type=EST; length=581bp
CACGCGTCCGCGAATTGACAGAAAGATTGATTCCAAATCCTAATGAAGAG
TCTCGTCTTGATATCCTAAAAATTCATTCAAGAAGAATGAATTTAATGCG
TGGCATTGATTTGAAGAAGATTGCCGAGAAGATGAATGGTGCATCTGGTG
CGGAGCTTAAGGCTGTGTGCACAGAAGCCGGTATGTTTGCTCTAAGAGAG
AGAAGGATCCATGTAACACAGGAAGATTTTGAGATGGCAGTGGCCAATGT
CATGAAGAAAGAAACAGAGAAGAACATGTCCTTGCGGAAGTTGTGGAAGN
TATCATTTCCATGTGCTGTGCTGTGTATTTGCTTANTTTCTGAGCAAGAT
TCANGTAGTCCCTTACGGCACTCACTCGTGTTCTGGGACATTTGCACGAT
AGGCCCTTTTAGCCTGACTGTTGTCTTTTCTTGCGCTCTAGCCTCCTAAT
GATAAACAAATTTGGCATCTATTTTATCTAAATTTAAATTCGCATGCAAT
TCTGGGAAACCTCAGTACCTCACTAAAATATGGAAAAGCCCGTCTGTGTC
TTGNTAGCAGCGGTACTATCATCGGTTTCCT
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