EY735567

Overview
NameEY735567
Unique NameEY735567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735567_ssr30 microsatellite EY735567_ssr30:30..41. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY735567 vs. ExPASy Swiss-Prot
Match: TSPY2_HUMAN (Testis-specific Y-encoded protein 2 OS=Homo sapiens GN=TSPY2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.084e-16
Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 2
Query:  176 SIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGTSGHWGEKSFFTWFSD 664
            ++E+L  +Q ELE +N +A +      +K    RKP  D+R  +I+S+P FW     +HP +  L+++ED+ +  Y+ SLEVE+ K       I   F  NPYF++  +TK +  ++        +T I+W     +      E      H    +FF WFSD
Sbjct:  108 ALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEY-LVNITEYRASHSTPIEWYPDYEV------EAYRRRHHNSSLNFFNWFSD 263          
BLAST of EY735567 vs. ExPASy Swiss-Prot
Match: TSPY1_RAT (Testis-specific Y-encoded protein 1 OS=Rattus norvegicus GN=Tspy1 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.415e-16
Identity = 42/130 (32.31%), Postives = 77/130 (59.23%), Query Frame = 2
Query:  179 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKW 568
            +E+L+ +Q EL  +N   S     ++ K +++R+P +D+R  II+ IP FW  A ++HP +  ++S +D+ +  Y+ SLEVE++        + F FS NPYF ++ +TK +  L   G  +  +++I+W
Sbjct:  149 MEELELLQLELSFVNARCSGAFARIKAKVAKMRRPHFDRRKTIIQGIPGFWAKAMMNHPQMSSIISNQDEDLLSYMLSLEVEEYNPGLRMCRMMFFFSENPYFRNDIVTKDYQ-LSIIGYKESDSSTIEW 277          
BLAST of EY735567 vs. ExPASy Swiss-Prot
Match: YGNB_SCHPO (Putative nucleosome assembly protein C2D10.11C OS=Schizosaccharomyces pombe GN=SPBC2D10.11c PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.495e-13
Identity = 41/142 (28.87%), Postives = 69/142 (48.59%), Query Frame = 2
Query:  179 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS-------------------------IPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDD 529
            I  L+ +Q + + I  E  +K+L++E KY +  +P++ +R +IIK                          IP+FWLT   +   +GE+++ ED+ + R LS +   +      GY + F F  N YF +  LTKT+ + DD
Sbjct:   95 ITALKGLQKDCDAIQYEFRQKMLDLETKYEKKYQPIFSRRAEIIKGVSEPVDDELDHEEEIFQNNLPDPKGIPEFWLTCLHNVFLVGEMITPEDENVLRSLSDIRFTNLSGDVHGYKLEFEFDSNDYFTNKILTKTYYYKDD 236          
BLAST of EY735567 vs. ExPASy Swiss-Prot
Match: TSPY1_BOVIN (Testis-specific Y-encoded protein 1 OS=Bos taurus GN=TSPY1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.155e-12
Identity = 43/150 (28.67%), Postives = 77/150 (51.33%), Query Frame = 2
Query:  131 VEEENAEQ----IDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKW 568
            VEE+  E+     + + + +++ L  +Q EL    E+     ++  +K  + RK    +R+ II+ IP FW  A +SHP +  L+S++DQ    Y+  L+V+      S   + F+F  NPYF ++ + K + +LD  G     +T + W
Sbjct:  107 VEEQGQERPGGPCERQELDALQALAALQVELSSEREQNRRAYVQFMRKNHQRRKRHLARRSTIIQGIPGFWAKAIMSHPQVSVLISDQDQDFLGYMMDLKVQVRSHPPSRCKLIFSFRDNPYFLNSVIIKEY-YLDITGYRARRSTPVHW 255          
BLAST of EY735567 vs. ExPASy Swiss-Prot
Match: NAP1_DICDI (Probable nucleosome assembly protein OS=Dictyostelium discoideum GN=nap1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 42/167 (25.15%), Postives = 83/167 (49.70%), Query Frame = 2
Query:  161 SELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII----------------------------KSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEG 577
            +E++  +  L  +QD   ++ E+  +++LE+E+KY +  +P+ +KR +I+                            K IP FWL   + +  + +++ E D +   YL  +++    D +  YS+ F+FS NP+F +  ++KT    +D+   +I +T I WK+G
Sbjct:   21 TEVLDRVNALLTLQDTQNELTEQMEKEILEIEKKYLKKFQPLAEKRFEIVSGKVEPTKEDQQCKAPIQVENLKSVPTDKGIPKFWLHV-LQNTEVKDIIEECDIEALEYLVDIKIVQVGDAQD-YSLDFHFSENPFFTNTVISKTVKLEEDNELNEIVSTPINWKDG 185          
BLAST of EY735567 vs. ExPASy Swiss-Prot
Match: NP1L1_HUMAN (Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 58/198 (29.29%), Postives = 90/198 (45.45%), Query Frame = 2
Query:  203 DELEKINEEASEKV-LEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDV--KSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMG-----IPNGVNHEKKGT----SGHWGEKSFFTWFSDTQEKDTIDGIQDEVGENIKSA 727
            DE ++I+EE  EK  +E E+K  E   P         K IP+FWLT F +   L +++ E D+ I ++L  ++V+ F D      + + F+F PN YF +  LTKT+              D    M  T   I WK+G       I     H+ +GT    +      SFF +F+  +  ++  G  D+  E I +A
Sbjct:  137 DEEDEISEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVK-FSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPES--GDLDDDAEAILAA 322          
BLAST of EY735567 vs. ExPASy Swiss-Prot
Match: NP1L1_MOUSE (Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 57/198 (28.79%), Postives = 90/198 (45.45%), Query Frame = 2
Query:  203 DELEKINEEASEKV-LEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDV--KSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMG-----IPNGVNHEKKGT----SGHWGEKSFFTWFSDTQEKDTIDGIQDEVGENIKSA 727
            DE ++++EE  EK  +E E+K  E   P         K IP+FWLT F +   L +++ E D+ I ++L  ++V+ F D      + + F+F PN YF +  LTKT+              D    M  T   I WK+G       I     H+ +GT    +      SFF +F+  +  +  +G  D+  E I +A
Sbjct:  137 DEEDEVSEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVK-FSDAGQPMSFVLEFHFEPNDYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPE--NGDLDDDAEAILAA 322          
BLAST of EY735567 vs. ExPASy Swiss-Prot
Match: NP1L1_BOVIN (Nucleosome assembly protein 1-like 1 OS=Bos taurus GN=NAP1L1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 58/198 (29.29%), Postives = 90/198 (45.45%), Query Frame = 2
Query:  203 DELEKINEEASEKV-LEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDV--KSGYSITFNFSPNPYFEDNKLTKTFTF-----------LDDDGSMKITATSIKWKEGMG-----IPNGVNHEKKGT----SGHWGEKSFFTWFSDTQEKDTIDGIQDEVGENIKSA 727
            DE ++I+EE  EK  +E E+K  E   P         K IP+FWLT F +   L +++ E D+ I ++L  ++V+ F D      + + F+F PN YF +  LTKT+              D    M  T   I WK+G       I     H+ +GT    +      SFF +F+  +  ++  G  D+  E I +A
Sbjct:  137 DEEDEISEELKEKAKVEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVK-FSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPES--GDLDDDSEAILAA 322          
The following BLAST results are available for this feature:
BLAST of EY735567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
TSPY2_HUMAN1.084e-1630.67Testis-specific Y-encoded protein 2 OS=Homo sapien... [more]
TSPY1_RAT2.415e-1632.31Testis-specific Y-encoded protein 1 OS=Rattus norv... [more]
YGNB_SCHPO9.495e-1328.87Putative nucleosome assembly protein C2D10.11C OS=... [more]
TSPY1_BOVIN6.155e-1228.67Testis-specific Y-encoded protein 1 OS=Bos taurus ... [more]
NAP1_DICDI8.038e-1225.15Probable nucleosome assembly protein OS=Dictyostel... [more]
NP1L1_HUMAN3.054e-1129.29Nucleosome assembly protein 1-like 1 OS=Homo sapie... [more]
NP1L1_MOUSE3.989e-1128.79Nucleosome assembly protein 1-like 1 OS=Mus muscul... [more]
NP1L1_BOVIN3.989e-1129.29Nucleosome assembly protein 1-like 1 OS=Bos taurus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-C03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735567 ID=EY735567; Name=EY735567; organism=Citrus sinensis; type=EST; length=850bp
CCACGCGTCCGGGGGTTTTAGGCACTCGTCGAGCGAGCGAGTTAGGGTTA
TTTAATTTTTATTTTATTTGTTTGTTATTTTAATAGCTACCAAGAGCAAA
ATGGTGGCAGACAAGGGCAAAAAAACCAAAGTTGAAGAAGAAAACGCAGA
GCAAATTGACTCAGAACTTGTTCTTTCCATCGAGAAACTCCAAGAGATCC
AAGACGAGCTTGAAAAGATTAACGAAGAGGCAAGCGAGAAAGTCTTGGAG
GTTGAGCAGAAATACAGTGAGATACGCAAGCCAGTCTATGATAAGCGAAA
TGATATCATCAAATCCATACCTGACTTCTGGTTAACTGCCTTTATTAGTC
ATCCTGCTCTCGGTGAACTTTTGAGTGAAGAGGATCAGAAGATATTCAGG
TACTTGAGCTCTCTGGAAGTGGAGGATTTTAAAGATGTCAAATCAGGATA
CTCCATCACATTTAACTTCTCCCCCAATCCCTATTTTGAAGATAACAAAC
TTACCAAGACTTTCACCTTCCTTGATGATGATGGTTCAATGAAAATTACT
GCTACATCAATCAAGTGGAAAGAGGGCATGGGCATACCAAATGGAGTTAA
TCATGAGAAGAAAGGAACAAGCGGCCATTGGGGGGAAAAAAGCTTCTTTA
CCTGGTTCAGTGATACCCAAGAGAAAGATACTATTGATGGTATCCAGGAT
GAGGTTGGAGAGAATATTAAGAGTGCACTTTAAACAAAGNNNGGNGGGGC
CGGGCGGGCGNGNGGTGCNNNNNANGAGGGNTGGGGGCGGGAGNAGGAGG
GTAAANGAGGTGACGACCCGGAAGATATGGAGCGTTTCCGGGGGGGGGTG
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