EY735563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY735563 vs. ExPASy Swiss-Prot
Match: RAE1_MOUSE (Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus GN=Chm PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.039e-23 Identity = 69/238 (28.99%), Postives = 120/238 (50.42%), Query Frame = 2 Query: 80 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVKFDEEGKVXGVTSE-GETAKCKKVVCDPSYLPNKVRKVGXVCXGNRY 787 R +N+D++ K + + G L+ +LI ++V++Y FK + + +G V +VP + + S + + EKR KF + +Y E+ P ++ + T T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K + + G+ K V + SYL C G +Y Sbjct: 237 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEY-EDHPDEYKAYEET--TFSEYLKTQKLTPNLQYFVLHSIAMTSE---TTSSTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIVDQFGQRIISKHFVIEDSYLSEN------TCSGVQY 461
BLAST of EY735563 vs. ExPASy Swiss-Prot
Match: RAE1_HUMAN (Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens GN=CHM PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 7.749e-23 Identity = 63/226 (27.88%), Postives = 116/226 (51.33%), Query Frame = 2 Query: 80 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVKFDEEGKVXGVTSE-GETAKCKKVVCDPSYLPNKV 751 R +N+D++ K + + G L+ +LI ++V++Y FK + + +G+V +VP + + S + + EKR KF + +Y E P ++G + +T E + L N + H++A+ + +D +K K + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K + + G+ + + + SY P + Sbjct: 225 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEY-EKYPDEYKGYE--EITFYEYLKTQKLTPNLQYIVMHSIAMTSETA---SSTIDGLKATKNFLHCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSYFPENM 443
BLAST of EY735563 vs. ExPASy Swiss-Prot
Match: RAE1_RAT (Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus GN=Chm PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 65/224 (29.02%), Postives = 117/224 (52.23%), Query Frame = 2 Query: 80 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE--NDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVKFDEEGKVXGVTSE-GETAKCKKVVCDPSYL 739 R +N+D++ + + + G L+ +LI ++V++Y FK + + +G V +VP + + S + + EKR KF + +Y+E ++ + +EG T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K V + G+ K + + SYL Sbjct: 222 RRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEG-----TTFSEYLKTQKLTPNLQYFVLHSIAMTSE---TTSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYL 436
BLAST of EY735563 vs. ExPASy Swiss-Prot
Match: RAEP_YEAST (Rab proteins geranylgeranyltransferase component A OS=Saccharomyces cerevisiae GN=MRS6 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12 Identity = 62/231 (26.84%), Postives = 103/231 (44.59%), Query Frame = 2 Query: 74 SSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIA-KYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLY-GLGELPQAFARLSAVYGGTYMLNKPECKVKFDEEGKVXGVTSEGETAKCKKVVCDPSYLPNKVRKV 760 SSRD+ +D+ PK + A L+ +LI + V +YL F+++ Y K+ T E + + KR KF +V ++ + +T T + + K+ L+ + + ++ L D LN + ++R++ Y S + G P + Y G GEL Q F R +AV G TY LN E V F+ KV + +KV+ P+ P + V Sbjct: 125 SSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNW---EAQTEIWQPYAERTMSDFLGEKFKLEKPQVFELIFSIGLCYD---LNVKVPEALQRIRRYLTSFDVY-GPFPALCSKYGGPGELSQGFCRSAAVGGATYKLN--EKLVSFNPTTKVATFQDGSKVEVSEKVIISPTQAPKDSKHV 346 The following BLAST results are available for this feature:
BLAST of EY735563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735563 ID=EY735563; Name=EY735563; organism=Citrus sinensis; type=EST; length=850bpback to top |