EY735562

Overview
NameEY735562
Unique NameEY735562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.690e-20
Identity = 50/158 (31.65%), Postives = 81/158 (51.27%), Query Frame = 1
Query:   64 MASKRINKELKDLQKDPPASCSAAT------------IMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 462
            MA +R+ KE K+L ++ P   +A              I GP  +PF GG++  ++ FP DYP  PP + F  + FHPN+  +G++C+ IL              E+WSP  ++ K+LLS+ S+L +PN +     +   M++ DR +Y    R   +K
Sbjct:    5 MALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.690e-20
Identity = 49/126 (38.89%), Postives = 72/126 (57.14%), Query Frame = 1
Query:  139 IMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVA---------------FRTKVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            I GP  +P+AGG F + +  P  YPF+PPKV                F T+++HPNI+S  G+ICLDILK++W+ +LT+  VLLS+ ++L  P P DP    +A  +  +   +  TA  WT  +A
Sbjct:   57 IKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UB2L6_HUMAN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo sapiens GN=UBE2L6 PE=1 SV=4)

HSP 1 Score: 97.8265 bits (242), Expect = 5.690e-20
Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 1
Query:   64 MASKRINKELKDLQKDPPA-----SCSAATIMG------PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 471
            MAS R+ KEL+DLQK PP      S   A ++       P   P+    F + I FPP+YPFKPP + F TK++HPN++ NG ICL I+  E W P     +VL ++  L+  PN  +PL  ++A +   +   +   A  +T ++ +
Sbjct:    2 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGV 149          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 51/138 (36.96%), Postives = 71/138 (51.45%), Query Frame = 1
Query:   79 INKELKDLQKDPPASCSA-----------ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQ 459
            + KE+  L  DPP                 TI GP  +P+AGG+F + +    D+P  PPK  F TK+FHPN+  NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y   AR  T+
Sbjct:   16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 51/138 (36.96%), Postives = 71/138 (51.45%), Query Frame = 1
Query:   79 INKELKDLQKDPPASCSA-----------ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQ 459
            + KE+  L  DPP                 TI GP  +P+AGG+F + +    D+P  PPK  F TK+FHPN+  NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y   AR  T+
Sbjct:   16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 55/155 (35.48%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSAA----------------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            S +A  R+ +E K  +KD P    A                  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  +R +YE   R+  +K+A
Sbjct:    2 SGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 55/155 (35.48%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSAA----------------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            S +A  R+ +E K  +KD P    A                  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  +R +YE   R+  +K+A
Sbjct:    2 SGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 55/155 (35.48%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSAA----------------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            S +A  R+ +E K  +KD P    A                  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  +R +YE   R+  +K+A
Sbjct:    2 SGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 55/155 (35.48%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSAA----------------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            S +A  R+ +E K  +KD P    A                  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  +R +YE   R+  +K+A
Sbjct:    2 SGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSAA----------------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            S +A  R+ +E K  +KD P    A                  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   ++  DR +YE   R+  +K++
Sbjct:    2 SGIALSRLAQERKAWRKDHPLGLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVRAQAKKFS 156          
The following BLAST results are available for this feature:
BLAST of EY735562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
UBC7_SCHPO5.690e-2031.65Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosa... [more]
UBC21_CAEEL5.690e-2038.89Probable ubiquitin-conjugating enzyme E2 21 OS=Cae... [more]
UB2L6_HUMAN5.690e-2035.81Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo s... [more]
UBE2S_RAT9.705e-2036.96Ubiquitin-conjugating enzyme E2 S OS=Rattus norveg... [more]
UBE2S_MOUSE9.705e-2036.96Ubiquitin-conjugating enzyme E2 S OS=Mus musculus ... [more]
UBC9_XENTR9.705e-2035.48SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA9.705e-2035.48SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR9.705e-2035.48SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]
UBC9_RAT9.705e-2035.48SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus ... [more]
UBC9_PAGMA9.705e-2034.84SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ub... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-B07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735562 ID=EY735562; Name=EY735562; organism=Citrus sinensis; type=EST; length=690bp
CCACGCGTCCGATAACACCAGACCCAAACTCTCAGGCCACAAAGTTTGTT
GAGAAATTCCCAGATGGCTTCAAAACGGATCAACAAGGAGTTGAAGGACC
TACAGAAGGACCCTCCTGCTTCTTGTAGCGCTGCAACAATTATGGGCCCA
TCAGACAGCCCATTTGCTGGGGGTGTATTTCTTGTATCCATTCATTTCCC
ACCTGATTATCCATTCAAGCCACCGAAGGTGGCCTTCCGTACTAAGGTTT
TCCACCCTAACATCAACAGCAATGGTAGCATCTGTCTTGACATTCTCAAG
GAGCAGTGGAGCCCTGCTTTGACAATATCCAAGGTACTTCTGTCAATTTG
CTCACTACTTACTGATCCGAACCCAGATGACCCACTTGTGCCTGAGATTG
CTCACATGTACAAGACTGACAGAGCCAAATATGAGACTACTGCTCGATCC
TGGACTCAGAAGTATGCCATGGGTTAAGAGGGGCTANGCTGTATGCCCCT
GAGAACATTAATGGCTTGTGGTCCTATTAGTAAATAATAGAAATAAGTTT
GTTTCAGATATTAAAAGACGATATTTGGTTTTGTTTACTAAGTTGTTAAA
AGGTTTTATGTGGGGGTTACTTTCAAATTTAGCATTGTTCTTCAATACTT
AAATTATAATTTACTGCAGAAAAAAAAAAAAAAAAAAAAA
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