EY735562

Overview
NameEY735562
Unique NameEY735562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC9_MESAU (SUMO-conjugating enzyme UBC9 OS=Mesocricetus auratus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSAA----------------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 465
            S +A  R+ +E K  +KD P    A                  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI+++ + I  LL +PN  +P   E   +Y  +R +YE   R+  +K+
Sbjct:    2 SGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITINQLFIGIQELLNEPNIQEPAQAEAYTIYCQNRVEYEKRFRAQAKKF 155          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  145 GPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            GP DS + GGV+ V +     YP+K P + F  K++HPN++  +GS+CLD++ + WSP   +  +  + +  LL  PNP DPL  E A +   D+  YE   + + ++YA
Sbjct:   38 GPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYA 147          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   64 MASKRINKELKDLQKDPPASCSAAT----------------IMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 465
            ++S R+++E K+ ++D P    A                  I G + + + GGV+ + + F  DYP KPPK  F    FHPN+  +G++CL IL E+  W P++TI  VLL I  LL +PNP  P      H++ T++ +Y+   ++ ++ Y
Sbjct:    4 ISSARLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVY 155          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 50/151 (33.11%), Postives = 78/151 (51.66%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSAA------------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 435
            +  AS  + K+LKDL K P    SA             TI+GP D+ + GG F   + FP +YP  PP V F + ++HPN+ S+G +C+ IL              E+W+P  T+  ++LSI S+L+ PN + P   E A  ++  R +++
Sbjct:    2 ASQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFK 152          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSA----------------ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            S +A+ R+ +E K  +KD P    A                  I G  D+ + GG++ + + F  D+P  PPK  F   +FHPN+  +G++CL +L E   W P+++I ++L+ I  LL  PN +DP   E   +Y  +RA+YE   +    KYA
Sbjct:    2 SGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 1
Query:   55 NSQMASKRINKELKDLQKDPPASCSAA------------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 435
            NSQ A   + K+LKDL K P    SA             TI+GP D+ + GG F   + FP +YP  PP V F + ++HPN+  +G +C+ IL              E+W+P  T+  ++LSI S+L+ PN + P   E A  ++  R +++
Sbjct:    2 NSQ-ACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFK 152          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 45/136 (33.09%), Postives = 73/136 (53.68%), Query Frame = 1
Query:   67 ASKRINKELKDLQKDPPASC---SAATIMG------PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 447
            A  R+ K+L +L           SA  IM       P +  + GG F  S +  P++P +PPKV    KV+HPNI+  G++CL+IL+E W P L+++ V++ +  L  +PN  DPL  + AH    +R +++   +
Sbjct:   25 AQLRVQKDLSELSLPSTMKTHFPSAEDIMNFELTVRPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVK 160          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UB2L6_BOVIN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos taurus GN=UBE2L6 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 48/147 (32.65%), Postives = 80/147 (54.42%), Query Frame = 1
Query:   67 ASKRINKELKDLQKDPPAS----CSAA-------TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 471
            ASKR+ KEL+DLQK+ P      CS          ++ P   P+    F + I FP +YPF+PP V F T+++HPN++ +G +CL I+ K+ W  +    +VL ++  L+  P P  P+  E+A     D   ++  A+ +T ++ +
Sbjct:    3 ASKRVAKELEDLQKELPKYLRNLCSEEDNVLVWHALLLPERPPYNLKAFRLCISFPREYPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKNWKASTRTCQVLEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQEFTLQFGV 149          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 1
Query:  139 IMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 468
            I GP +S +    F + I    DYP+  PKV F T + H N+N  G ICL+ILK+  W+ +L I  ++ SI  LL  PNP+DP   E+A +Y+ D+  Y+   R + + ++
Sbjct:   43 IKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIRDYCKTHS 153          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 49/148 (33.11%), Postives = 79/148 (53.38%), Query Frame = 1
Query:   64 MASKRINKELKDLQKDPPA-----SCSAATIMG------PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 471
            MASKR+ KEL+ L K+ P      S   A ++       P   P+    F V I FP +YPFKPP + F TK++HPN+  +G +CL ++  E W P     +VL ++  L++ PN ++P+  E+A +   +   +   A  +T K+ +
Sbjct:    2 MASKRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLLPDQLPYGLKAFQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKKAEEFTLKFGV 149          
The following BLAST results are available for this feature:
BLAST of EY735562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
UBC9_MESAU9.084e-1833.12SUMO-conjugating enzyme UBC9 OS=Mesocricetus aurat... [more]
UBC4_WHEAT9.084e-1836.36Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum... [more]
UBC9_DICDI1.186e-1732.24Sumo-conjugating enzyme ubc9 OS=Dictyostelium disc... [more]
UBC7_ARATH1.186e-1733.11Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis t... [more]
UBC9_CAEEL2.643e-1732.26SUMO-conjugating enzyme UBC9 OS=Caenorhabditis ele... [more]
UBC13_ARATH2.643e-1733.55Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis ... [more]
UBC12_YARLI2.643e-1733.09NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolyt... [more]
UB2L6_BOVIN2.643e-1732.65Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos ta... [more]
UBC1_MIMIV4.508e-1737.84Probable ubiquitin-conjugating enzyme E2 L460 OS=A... [more]
UB2L6_MOUSE4.508e-1733.11Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus mu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-B07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735562 ID=EY735562; Name=EY735562; organism=Citrus sinensis; type=EST; length=690bp
CCACGCGTCCGATAACACCAGACCCAAACTCTCAGGCCACAAAGTTTGTT
GAGAAATTCCCAGATGGCTTCAAAACGGATCAACAAGGAGTTGAAGGACC
TACAGAAGGACCCTCCTGCTTCTTGTAGCGCTGCAACAATTATGGGCCCA
TCAGACAGCCCATTTGCTGGGGGTGTATTTCTTGTATCCATTCATTTCCC
ACCTGATTATCCATTCAAGCCACCGAAGGTGGCCTTCCGTACTAAGGTTT
TCCACCCTAACATCAACAGCAATGGTAGCATCTGTCTTGACATTCTCAAG
GAGCAGTGGAGCCCTGCTTTGACAATATCCAAGGTACTTCTGTCAATTTG
CTCACTACTTACTGATCCGAACCCAGATGACCCACTTGTGCCTGAGATTG
CTCACATGTACAAGACTGACAGAGCCAAATATGAGACTACTGCTCGATCC
TGGACTCAGAAGTATGCCATGGGTTAAGAGGGGCTANGCTGTATGCCCCT
GAGAACATTAATGGCTTGTGGTCCTATTAGTAAATAATAGAAATAAGTTT
GTTTCAGATATTAAAAGACGATATTTGGTTTTGTTTACTAAGTTGTTAAA
AGGTTTTATGTGGGGGTTACTTTCAAATTTAGCATTGTTCTTCAATACTT
AAATTATAATTTACTGCAGAAAAAAAAAAAAAAAAAAAAA
back to top