EY735547

Overview
NameEY735547
Unique NameEY735547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735547 vs. ExPASy Swiss-Prot
Match: LOX5_MOUSE (Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.531e-21
Identity = 68/219 (31.05%), Postives = 109/219 (49.77%), Query Frame = 3
Query:   24 PIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPF---ANDGLDLWDAIKQWVTDYVNHYYPX*SLVESDEELQAWWTEIRTVGHGDKK 671
            PIAI+L + P    P    +FLP+    +   W LAK  V + D   HQ ++H LRTH  +E + IA  RQL  +HP+++LL  H R+T+ IN  AR+ L+   G+ + + + G            +   +     P+ + +RG+             + ED PF    +DGL +W+AI+ +  + V+ YY    +VE D+ELQ +  ++   G   KK
Sbjct:  323 PIAIQLNQTPGESNP----IFLPTDSKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMD------------STEDMPFYFYRDDGLLVWEAIQSFTMEVVSIYYENDQVVEEDQELQDFVKDVYVYGMRGKK 522          

HSP 2 Score: 23.8682 bits (50), Expect = 1.531e-21
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  770 FGQYTYGGYFPNRPP 814
            FGQY +  + PN PP
Sbjct:  556 FGQYDWCSWIPNAPP 570          
BLAST of EY735547 vs. ExPASy Swiss-Prot
Match: LOX5_HUMAN (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.531e-21
Identity = 68/216 (31.48%), Postives = 109/216 (50.46%), Query Frame = 3
Query:   24 PIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPX*SLVESDEELQAWWTEIRTVGHGDKK 671
            PIAI+L + P +  P    +FLPS    +   W LAK  V + D   HQ ++H LRTH  +E + IA  RQL  +HPI++LL  H R+T+ IN  AR+ L+   G+ + + + G            K   +     P+ + +RG+  ++          I  Y + +DGL +W+AI+ +  + V+ YY    +VE D ELQ +  ++   G   +K
Sbjct:  323 PIAIQLNQIPGDENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRK 522          

HSP 2 Score: 23.8682 bits (50), Expect = 1.531e-21
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  770 FGQYTYGGYFPNRPP 814
            FGQY +  + PN PP
Sbjct:  556 FGQYDWCSWIPNAPP 570          
BLAST of EY735547 vs. ExPASy Swiss-Prot
Match: LOX15_HUMAN (Arachidonate 15-lipoxygenase OS=Homo sapiens GN=ALOX15 PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 74/215 (34.42%), Postives = 99/215 (46.05%), Query Frame = 3
Query:   12 GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPX*SLVESDEELQAWWTEIRTVG 656
            G L P+ I+L  P     P    +FLP+        W LAK  V + D   H+L SH LR H   E  V+AT R L  +HPI++L+ PH RYT+EIN  AR  LV+  GI +   S G                +     P DL  RGL            L ++   +A D L LW+ I ++V   V+ +Y     V+ D ELQ W  EI  +G
Sbjct:  309 GKLLPMVIQLQLPRTGSPPP--PLFLPT---DPPMAWLLAKCWVRSSDFQLHELQSHLLRGHLMAEVIVVATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIG 506          
BLAST of EY735547 vs. ExPASy Swiss-Prot
Match: LOX12_BOVIN (Arachidonate 12-lipoxygenase, 12S-type OS=Bos taurus GN=ALOX12 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 73/215 (33.95%), Postives = 99/215 (46.05%), Query Frame = 3
Query:   12 GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPX*SLVESDEELQAWWTEIRTVG 656
            G L P+AI+L  P     P    +FLP+        W LAK  V + D   H+L SH LR H   E   +AT R L  +HP+++LL PH RYTMEIN  AR  LV+  G+ +   S G                +     P DL  RGL            L ++   +A D L LW+ + ++V   V+ +Y     V  D ELQAW  +I  +G
Sbjct:  310 GKLLPMAIQLQLPHKGSPPP--PLFLPT---DPPMTWLLAKCWVRSSDFQLHELHSHLLRGHLVAEVIAVATMRCLPSIHPMFKLLIPHLRYTMEINIRARTGLVSDSGVFDQVVSTGGGGHVELLQRAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLWEILSRYVEGIVSLHYKTDESVRDDIELQAWCRDITEIG 507          
BLAST of EY735547 vs. ExPASy Swiss-Prot
Match: LX12L_MOUSE (Arachidonate 12-lipoxygenase, leukocyte-type OS=Mus musculus GN=Alox12l PE=1 SV=4)

HSP 1 Score: 102.834 bits (255), Expect = 2.493e-21
Identity = 71/215 (33.02%), Postives = 96/215 (44.65%), Query Frame = 3
Query:   12 GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPX*SLVESDEELQAWWTEIRTVG 656
            G L PIAI+L  P     P    +F P     +   W LAK  V + D   H+L +H LR H   E + +AT R L  +HP+++LL PH  YTMEIN  AR  L++  G  +   S G                +     P DL  RGL            L I+   +A D L LW  + ++V    + YY     V+ D ELQ+W  EI  +G
Sbjct:  310 GQLLPIAIQLELPKTGSTPP--PIFTPLDPPMD---WLLAKCWVRSSDLQLHELQAHLLRGHLVAEVFAVATMRCLPSVHPVFKLLVPHLLYTMEINVRARSDLISERGFFDKVMSTGGGGHLDLLKQAGAFLTYSSLCPPDDLAERGL------------LDIDTCFYAKDALQLWQVMNRYVVGMFDLYYKTDQAVQDDYELQSWCQEITEIG 507          
BLAST of EY735547 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 9.646e-21
Identity = 68/217 (31.34%), Postives = 109/217 (50.23%), Query Frame = 3
Query:   24 PIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGL-AVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPX*SLVESDEELQAWWTEIRTVGHGDKK 671
            PIAI+L + P    P    +FLP+    +   W LAK  V + D   HQ ++H LRTH  +E + IA  RQL  +HP+++LL  H R+T+ IN  AR+ L    G+ + + + G            +   +     P+ + +RG+   ED          I  Y + +DGL +W+AI+ + T+ V+ YY    +VE D+ELQ +  ++   G   +K
Sbjct:  322 PIAIQLNQTPGEKNP----IFLPTDSKYD---WLLAKIWVRSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLNCEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMDNTED----------IPYYFYRDDGLLVWEAIQSFTTEVVSIYYEDDQVVEEDQELQDFVKDVYVYGMRGRK 521          

HSP 2 Score: 23.8682 bits (50), Expect = 9.646e-21
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  770 FGQYTYGGYFPNRPP 814
            FGQY +  + PN PP
Sbjct:  555 FGQYDWCSWIPNAPP 569          
BLAST of EY735547 vs. ExPASy Swiss-Prot
Match: LOX5_MESAU (Arachidonate 5-lipoxygenase OS=Mesocricetus auratus GN=ALOX5 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.670e-20
Identity = 67/217 (30.88%), Postives = 109/217 (50.23%), Query Frame = 3
Query:   24 PIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGL-AVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPX*SLVESDEELQAWWTEIRTVGHGDKK 671
            PIAI+L + P    P    +FLPS    +   W LAK  V + D   HQ ++H L TH  +E + IA  RQL  +HPI++LL  H R+T+ IN  AR+ L+   G+ + + + G            +   +     P+ + +RG+ + ED          I  Y + +DGL +W+AI+ + ++ V+ YY    +V  D+ELQ +  ++   G   +K
Sbjct:  322 PIAIQLNQAPGEKNP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLCTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMDSTED----------IPYYFYRDDGLLVWEAIQSFTSEVVSIYYEDDQVVMEDQELQDFVKDVYVYGMRGRK 521          

HSP 2 Score: 23.8682 bits (50), Expect = 4.670e-20
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  770 FGQYTYGGYFPNRPP 814
            FGQY +  + PN PP
Sbjct:  555 FGQYDWCSWIPNAPP 569          
The following BLAST results are available for this feature:
BLAST of EY735547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LOX5_MOUSE1.531e-2131.05Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alo... [more]
LOX5_HUMAN1.531e-2131.48Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
LOX15_HUMAN1.909e-2134.42Arachidonate 15-lipoxygenase OS=Homo sapiens GN=AL... [more]
LOX12_BOVIN1.909e-2133.95Arachidonate 12-lipoxygenase, 12S-type OS=Bos taur... [more]
LX12L_MOUSE2.493e-2133.02Arachidonate 12-lipoxygenase, leukocyte-type OS=Mu... [more]
LOX5_RAT9.646e-2131.34Arachidonate 5-lipoxygenase OS=Rattus norvegicus G... [more]
LOX5_MESAU4.670e-2030.88Arachidonate 5-lipoxygenase OS=Mesocricetus auratu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-A04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735547 ID=EY735547; Name=EY735547; organism=Citrus sinensis; type=EST; length=851bp
CCACGCGTCCGGGCACATTGAGACCAATAGCTATTGAGCTCACTCGGCCT
CCAATGAATGGCAAGCCACAATGGAAACAAGTGTTTTTACCTTCTTGGCA
CTCTACTGAGTGCTGGCTTTGGAAGCTAGCCAAAGCTCATGTCCTTGCTC
ATGATGCTGGCTATCACCAGCTTGTCAGCCATTGGTTAAGAACTCATTGT
TGCACAGAACCTTACGTAATAGCAACCAATCGGCAACTCAGCGTGATGCA
TCCAATCTATAGATTGTTGGATCCTCATTTTCGATACACAATGGAGATCA
ATGGTTTGGCTCGACAAGCTCTTGTTAATGCTGATGGAATCATTGAAAGC
TCATTCTCACCTGGAAAGTACTCTATGGAATTCAGCTCTGTTGCCTATGA
CAAGCAATGGCGCTTTGACCATGAAGCACTCCCCAAAGACCTAATTAGCC
GGGGATTGGCTGTTGAAGATCCAAGTGCTCCACATGGCTTGAAGCTAACA
ATTGAAGACTATCCTTTTGCCAATGATGGCCTTGATCTCTGGGATGCCAT
AAAACAATGGGTTACCGATTATGTTAATCACTACTACCCTNGATAAAGCC
TTGTAGAATCTGATGAAGAGCTCCAAGCTTGGTGGACTGAAATTCGAACT
GTGGGACACGGTGACAAGAAACATGAACCTTGGTGGCCTGTCTTGANNAC
CCCTAANGGGATTATTGAAATCATCACAACTATTGTTTGGGTAAACATCT
GGTCACACGCAGCTGTTACTTCGGCCAATACACTTACGGAGGCTATTTCC
CCAATAGGCCACCACTGCCAGATGCAACATGCCACTGAAGATCATCTGAT
G
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