EY735544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS7_ACECL (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Acetabularia cliftonii GN=RBCS-7 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.980e-18 Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 M VW P K FET SYLPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTD + VL D+ ++R+V Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLV 151
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS3_ACEAT (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia acetabulum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.449e-17 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTDA+ VL ++ ++R+V Sbjct: 43 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLV 150
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS2_ACEAT (Ribulose bisphosphate carboxylase small chain 2, chloroplastic (Fragment) OS=Acetabularia acetabulum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.892e-17 Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTD + VL ++ ++R+V ++ + + S + P S Y P Sbjct: 34 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDAN-RQVQISGFLVHRPPSATDYRLP 168
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_ACEAT (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Acetabularia acetabulum GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.892e-17 Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTD + VL ++ ++R+V ++ + + S + P S Y P Sbjct: 43 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDAN-RQVQISGFLVHRPPSATDYRLP 177
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_ACECL (Ribulose bisphosphate carboxylase small chain 1 (Fragment) OS=Acetabularia cliftonii GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 309 SYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 SYLPPL+DE + K++ Y+L + W PCLEF ++ + ++ I G Y D RY TM KLPM+GCTD + VL ++ ++R+V ++ + + S + P S Y P Sbjct: 2 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDAN-RQVQISGFLVHRPPSATDYRLP 121
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_SINAL (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Sinapis alba GN=RBCS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12 Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 3 Query: 396 ELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 ELE G+V REH +PGYYDGRY TM KLP++GCTD+ VLK+V + E F+R++ Sbjct: 1 ELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRII 58 The following BLAST results are available for this feature:
BLAST of EY735544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735544 ID=EY735544; Name=EY735544; organism=Citrus sinensis; type=EST; length=919bpback to top |