EY735544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 7.356e-54 Identity = 103/161 (63.98%), Postives = 128/161 (79.50%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++SS VAT R + AQASMVAPFTGLKS+++ P ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+V RE++ SPGYYDGRY TM KLPM+GCTDAT VL +V + ++R++ Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRII 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.639e-53 Identity = 103/184 (55.98%), Postives = 140/184 (76.09%), Query Frame = 3 Query: 87 MASSMISSTTVAT--ANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPAS 632 MASSM+S+ VAT A+R++ AQASMVAPFTGLKS SA P T+K++ND++++ SNGG+V CM+VWPP G KKFETLSYLPPLS+E+LLKE+ YLL +GW+PCLEFE G+V REH +PGYYDGRY TM KLPM+GCTD + V+ ++ + F+R++ +++ + + +A +PAS Sbjct: 1 MASSMLSNAAVATTAASRSAGAQASMVAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDN-VRQVQCVSFIAYKPAS 183
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.140e-53 Identity = 103/161 (63.98%), Postives = 124/161 (77.02%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++S+ TVAT A+ AQASM+A F GLKS+++ P T+K + DITSIASNGGRV CM VWPP KK+ETLSYLP LSDE LLKEI YLL+ GW+PCLEFE E G+V REHH SPGYYDGRY TM KLPM+GCTDAT VL +V + ++R++ Sbjct: 1 MASSVMSTATVATG--ANAAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRII 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.140e-53 Identity = 103/161 (63.98%), Postives = 125/161 (77.64%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++SS VAT+ A AQASMVAPFTGLKS+++ P ++K N DITSIASNGGRV CM+VWPP G KK+ETLSYLP L+DE LLKEI YLL GW+PCLEFE E G+V RE+H SP YYDGRY TM KLPM+GCTDAT VL ++ + ++R++ Sbjct: 1 MASSVMSSAAVATSTNA--AQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRII 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.795e-53 Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 3 Query: 93 SSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 +SMISS+ V T +RAS Q++ VAPF GLKS + P KK N DITSI SNGGRV CM+VWPP G KKFETLSYLPPL+ + LLKE+ YLLR GW+PCLEFELEKG+V REH+ SPGYYDGRY TM KLPM+G TDA+ VLK++ +V FVR++ Sbjct: 2 ASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRII 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.651e-53 Identity = 106/161 (65.84%), Postives = 121/161 (75.16%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASSMISS V T NRA A VAPFTGLKS + P T+KTNNDI SIASNGGRV CM+VWP TG KKFETLSYLP L D L KE+ YLLR GWIPCLEFELE G+V RE+H SPGYYDGRY TM KLP++GCTDA+ VLK++ + F+R++ Sbjct: 1 MASSMISSPAVTTVNRAG---AGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRII 157
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.651e-53 Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 3 Query: 93 SSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 +SMISS+ V T +RAS Q++ VAPF GLKS + P KK N DITSI SNGGRV CM+VWPP G KKFETLSYLPPL+ + LLKE+ YLLR GW+PCLEFELEKG+V REH+ SPGYYDGRY TM KLPM+G TDA+ VLK++ +V FVR++ Sbjct: 2 ASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRII 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.651e-53 Identity = 102/162 (62.96%), Postives = 127/162 (78.40%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQA-SMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS+ISS VAT R ++ QA SM+APFTGLKS++ P ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP L+DE LLKE+ YLL++GW+PCLEFE E G+V RE+H SPGYYDGRY TM KLPM+GCTDAT VL +V + ++R++ Sbjct: 1 MASSVISSAAVAT--RTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRII 160
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.768e-53 Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDV 524 MASS++SS VAT R++ AQASMVAPFTGLKS+++ P ++KTN DITSIASNGGRV CM+VWPP +KK+ETLSYLP LS E LL EI YLL++GW+PCLEFE E G+V REH SPGYYDGRY TM KLPM+GCTDAT V +V Sbjct: 1 MASSIMSSAAVAT--RSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEV 144
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 8.133e-53 Identity = 103/161 (63.98%), Postives = 123/161 (76.40%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS+ISS VAT R ++AQASMVAPF GLKS+ + P + K N DITSIASNGGRV CM+VWPP G KK+ETLSYLP L+DE LLKEI YLL GW+PCLEFE E G+V RE+H SP YYDGRY TM KLPM+GCTDAT VL ++ + ++R++ Sbjct: 1 MASSVISSAAVAT--RTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRII 159 The following BLAST results are available for this feature:
BLAST of EY735544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735544 ID=EY735544; Name=EY735544; organism=Citrus sinensis; type=EST; length=919bpback to top |