EY735544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.463e-51 Identity = 102/168 (60.71%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 87 MASSMISS--TTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHE 584 MASSM+S+ T VA A + AQA+MVAPF GLKS ++ P T+K+N DITSIASNGGRV CM+VWPP G KKFETLSYLPPLSD LL ++ YLL GWIPC+EFELE +V RE+H SPGY DGRY TM KLPMYGCTD VL +V + F+R++ ++++ Sbjct: 1 MASSMMSNAATAVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNK 167
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS3_FRIAG (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.829e-51 Identity = 99/161 (61.49%), Postives = 124/161 (77.02%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS ++VATA RA+ AQASMVAPF GLKS+SA P T+K ++++ SNGGRV CMKVWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRY TM KLPM+GCTDA V+K+ + E F+R++ Sbjct: 1 MASSATMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVI 160
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.829e-51 Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 99 MISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 +I S+ A A + AQASM+APFTGLKS+++ P ++K N DITSIASNGGRV CM+VWPP KK+ETLSYLP LS+E LL+E+ YLL++GW+PCLEFE E G+V RE++ SPGYYDGRY TM KLPM+GCTDAT VL +V + ++R++ Sbjct: 4 LIMSSAAAVATGTNAAQASMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRII 160
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS2_MESCR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.612e-51 Identity = 104/182 (57.14%), Postives = 131/182 (71.98%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPAS 632 MAS M + A R + AQASMVAPFTGLKS SA P TKK+N DITSIASNGGRV CM+VWPP G KKFETLSYLPPLS+E+L+KE+ YLL +GW+PCLEFE G+V REH +PGYYDGRY TM KLPM+GCTD + V+ ++ + F R++ +++ + + +A +PAS Sbjct: 1 MASMM---SNAAVVGRTTPAQASMVAPFTGLKSVSAFPVTKKSN-DITSIASNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRIIGFDN-VRQVQCISFIAYKPAS 177
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.942e-51 Identity = 94/154 (61.04%), Postives = 121/154 (78.57%), Query Frame = 3 Query: 108 STTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 S++VAT +R + AQA+MVAPFTGLKS++A P TKK N D +++ SNGGRV CMKVWPP GLKK+ETLSYLPPL++ L KE+ YLLR W+PCLEFELE G+V RE+ SPGYYDGRY TM KLPM+GCTD+ V+K++ + E ++R++ Sbjct: 5 SSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKAN-DFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRII 157
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS6_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.298e-50 Identity = 99/166 (59.64%), Postives = 126/166 (75.90%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHE 584 MASSM++ST A R AQ +MVAPF GL+SS A PAT+K NND++++ SNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE+ YLLR+ W+PC+EF E G+V RE+H SPGYYDGRY TM KLPM+GCTDA+ V+ +V + FVR++ ++++ Sbjct: 1 MASSMMAST--AAVARVGPAQTNMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNK 163
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.215e-50 Identity = 100/166 (60.24%), Postives = 124/166 (74.70%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHE 584 MASS++S+ A AS AQA+MVAPF GLKS ++ P T+K+N DITSIASNGGRV CM+VWPP G KKFETLSYLPPLSD LL ++ YLL +GWIPC+EFELE +V RE+H SPGY DGRY TM KLPMYGCTD VL +V + F+R++ ++++ Sbjct: 1 MASSLMSNAITAVVG-ASGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNK 164
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS4_FLAPR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Flaveria pringlei GN=RBCS4 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.893e-50 Identity = 95/154 (61.69%), Postives = 122/154 (79.22%), Query Frame = 3 Query: 108 STTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 S+TVAT +RA+ AQA+MVAPFTGLKS++A PATKK N D +++ SNGGRV CMKVWPP G KK+ETLSYLP L++ L KE+ YLLR+ W+PCLEFELE G+V RE+ SPGYYDGRY TM KLPM+GCTD+ V+K++ + E ++R++ Sbjct: 5 SSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKAN-DFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRII 157
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.778e-50 Identity = 98/161 (60.87%), Postives = 123/161 (76.40%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS ++VATA + AQASMVAPF GLKS+SA P T+KT ++++ SNGGRV CMKVWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRY TM KLPM+GCTDA V+K+ + E F+R++ Sbjct: 1 MASSATMLSSVATAACVAPAQASMVAPFVGLKSASAFPVTQKTVTGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVI 160
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS5_FRIAG (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Fritillaria agrestis GN=RBCS5 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.444e-50 Identity = 98/161 (60.87%), Postives = 123/161 (76.40%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS ++VATA A+ AQASMVAPF GLKS+SA P T+KT ++++ SNGGRV CMKVWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRY TM KLPM+GCT A V+K+ + E F+R++ Sbjct: 1 MASSATMLSSVATAACAAPAQASMVAPFVGLKSASAFPVTQKTATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTGAAQVVKEAAECKKEYPAAFIRVI 160 The following BLAST results are available for this feature:
BLAST of EY735544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735544 ID=EY735544; Name=EY735544; organism=Citrus sinensis; type=EST; length=919bpback to top |