EY735544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.714e-40 Identity = 76/142 (53.52%), Postives = 103/142 (72.54%), Query Frame = 3 Query: 144 AQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 + A+ VAPF GLKS++ P ++++N SNGGR+ CM+VWP G+KKFETLSYLPPLS E LLK++ YL+RS W+PCLEF + G++ REH++SPGYYDGRY TM KLPM+GC T V+ +V +V E + R++ Sbjct: 8 SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFR-KVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKEYPDPYCRII 148
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_MAIZE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.652e-38 Identity = 74/127 (58.27%), Postives = 98/127 (77.17%), Query Frame = 3 Query: 144 AQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDV 524 + A+ VAPF GLKS+++ P ++++ + ++ SNGGR+ CM+VWP G KKFETLSYLPPLS + LLK++ YLLR+GWIPCLEF + G+V RE+ SP YYDGRY TM KLPM+GC DAT V K++ Sbjct: 9 SSATAVAPFQGLKSTASLPVARRSSRSLGNV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFS-KVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKEL 133
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_SACHY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.808e-37 Identity = 72/127 (56.69%), Postives = 95/127 (74.80%), Query Frame = 3 Query: 144 AQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDV 524 + A+ APF GLKS+++ P +++ + + SNGGR+ CM+VWP G KKFETLSYLPPL+ E LLK++ YLLR+ W+PCLEF E G+V RE+ SP YYDGRY TM KLPM+GCTDA+ V K++ Sbjct: 8 SSATAAAPFQGLKSTASLPVARRSTTSLAKV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKE-GFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKEL 132
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.668e-37 Identity = 76/152 (50.00%), Postives = 105/152 (69.08%), Query Frame = 3 Query: 126 ANRASLAQASMVAPFTGLKSSSACPATKKTNNDITS----IASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 A A A++V+ FTGLKS++ P++ K +N SNGGRV CM+VWPP G KFETLSYLP L++E L+KE+ YLLR+ W+PCLEF+LE G + R+++ SPGYYDGRY M KLPM+GCT+A+ V+ +V + F+R++ Sbjct: 2 ATGAGAGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLE-GSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVI 152
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.917e-36 Identity = 72/114 (63.16%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 228 TSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 T I SNG RV CM+VWPP G KKFETLSYLPPL+ + LLKE+ YLLR GW+PCLEFEL KG+V EH+ SP YYDGRY TM KLPM+G TD V+K+V +V FVR++ Sbjct: 2 TDITSNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRVI 115
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.856e-35 Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 3 Query: 87 MASSMIS-STTVATANRASLAQ---ASMVAPFTGLKSSSACPATKKTNNDITS----IASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS+++ S+T A A A+ ++ +++V+ FTGLKS + P++K +N SNG RV CM+VWPP KKFETLSYLP L+ E L+KE+ YLL++ W+PCLEFE E G + R + SPGYYDGRY M KLPM+GCT+A+ VL +V + F+R++ Sbjct: 1 MASSIMALSSTAAVAAVAAPSKTGNSNVVSAFTGLKSMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFE-EDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVI 168
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_MARPA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.493e-30 Identity = 65/144 (45.14%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 93 SSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDV 524 +S+++S V T AS A + + +++ + T +NG RV CM+VW P KFETLSYLPPLS +AL K+I Y+++SGW PC+EF+++ G V RE PGYYDGRY TM KLPM+GCTD+ VL+++ Sbjct: 2 ASVVASAAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQ-GTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREI 144
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.407e-30 Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPA 629 M+VWPP GLKKFETLSYLPPL+ E LL E++YLL GWIP LEFE++ G+V REH SPGYYDGRY TM KLPM+G TD V+ +V +V FVR + + ++ E + +A +PA Sbjct: 1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVRFIGF-NDKREVQCISFIAYKPA 121
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS3_WHEAT (Ribulose bisphosphate carboxylase small chain clone 512 (Fragment) OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.370e-25 Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 309 SYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 +YLPPLS EALLK++ YL+RS W+PCLEF + G++ REH+ SPGYYDGRY TM KLPM+GCTDAT V+ +V +V E +VR++ Sbjct: 1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKEYPDAYVRII 86
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS2_CHLRE (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-2 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.072e-20 Identity = 64/166 (38.55%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 105 SSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEF-ELEKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHE 584 SS + A A A S V P LK PA K + + + + M VW P K FET SYLPPLSDE + ++ Y++ +GWIPCLEF E +K +V E I G YYD RY TM KLPM+GC D VL+++ +VR+V ++++ Sbjct: 8 SSVSAAVARPAR----SSVRPMAALK-----PAVK------AAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQ 158 The following BLAST results are available for this feature:
BLAST of EY735544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735544 ID=EY735544; Name=EY735544; organism=Citrus sinensis; type=EST; length=919bpback to top |