EY756579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPH (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=msbA PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11 Identity = 39/136 (28.68%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 221 RSRFGIIPQEPVLFEGTVRSNVDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622 R + ++ Q LF T+ +N+ G++ S E+I + + + + PD D+ V ++G S GQRQ + + R +LK + +L +D AT+++DS+++ IQ + + T + IAHR+ T+ ++IV+ Sbjct: 415 RKQMSLVSQNVTLFNDTLANNI-AYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVL 549
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPA (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Paris) GN=msbA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11 Identity = 39/136 (28.68%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 221 RSRFGIIPQEPVLFEGTVRSNVDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622 R + ++ Q LF T+ +N+ G++ S E+I + + + + PD D+ V ++G S GQRQ + + R +LK + +L +D AT+++DS+++ IQ + + T + IAHR+ T+ ++IV+ Sbjct: 415 RKQISLVSQNVTLFNDTLANNI-AYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVL 549
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPL (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Lens) GN=msbA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11 Identity = 39/136 (28.68%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 221 RSRFGIIPQEPVLFEGTVRSNVDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622 R + ++ Q LF T+ +N+ G++ S E+I + + + + PD D+ V ++G S GQRQ + + R +LK + +L +D AT+++DS+++ IQ + + T + IAHR+ T+ ++IV+ Sbjct: 415 RKQMSLVSQNVTLFNDTLANNI-AYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMNGRTTLIIAHRLSTIKHAHKIIVM 549
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: TAP1_RAT (Antigen peptide transporter 1 OS=Rattus norvegicus GN=Tap1 PE=1 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 4.486e-11 Identity = 36/120 (30.00%), Postives = 65/120 (54.17%), Query Frame = 2 Query: 239 IPQEPVLFEGTVRSNV--DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIRE--EFAACTIISIAHRI 586 + QEP+LF + R N+ + EEI D ++ P D+ V ++G+ S GQRQ + L R +++ RLL +D AT+++D+ +QR++ E E+A+ T++ I ++ Sbjct: 561 VGQEPLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDDATSALDAGNQLRVQRLLYESPEWASRTVLLITQQL 680 HSP 2 Score: 30.0314 bits (66), Expect = 4.486e-11 Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 1 Query: 49 VLKGITLSILGGEKIGVVGRTGSGKSTL 132 VL+G+T ++ G+ +VG GSGKST+ Sbjct: 497 VLQGLTFTLYPGKVTALVGPNGSGKSTV 524
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: NDVA_RHIRD (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium radiobacter GN=ndvA PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.513e-11 Identity = 36/137 (26.28%), Postives = 74/137 (54.01%), Query Frame = 2 Query: 221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVD 625 R+ + Q+ L ++R N+ +G+ + D E+ ++ D + ++ + + V + G+ S G+RQ + + R +LK++ +L +D AT+++D +T+A ++ + T IAHR+ TV D D V+ +D Sbjct: 408 RNSIATVFQDAGLLNRSIRENIR-LGRETATDAEVVEAAAAAAATDFIDSRINGYLTQVGERGNRLSGGERQRIAIARAILKNAPILVLDEATSALDVETEARVKAAVDALRKNRTTFIIAHRLSTVRDADLVLFLD 543 HSP 2 Score: 29.261 bits (64), Expect = 4.513e-11 Identity = 12/33 (36.36%), Postives = 21/33 (63.64%), Query Frame = 1 Query: 34 SNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132 +NT + ++ + GE + +VG TG+GK+TL Sbjct: 345 ANTKQGVHDVSFTAKAGETVAIVGPTGAGKTTL 377
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: NDVA_AGRT5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndvA PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.513e-11 Identity = 36/137 (26.28%), Postives = 74/137 (54.01%), Query Frame = 2 Query: 221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVD 625 R+ + Q+ L ++R N+ +G+ + D E+ ++ D + ++ + + V + G+ S G+RQ + + R +LK++ +L +D AT+++D +T+A ++ + T IAHR+ TV D D V+ +D Sbjct: 408 RNSIATVFQDAGLLNRSIRENIR-LGRETATDAEVVEAAAAAAATDFIDSRINGYLTQVGERGNRLSGGERQRIAIARAILKNAPILVLDEATSALDVETEARVKAAVDALRKNRTTFIIAHRLSTVRDADLVLFLD 543 HSP 2 Score: 29.261 bits (64), Expect = 4.513e-11 Identity = 12/33 (36.36%), Postives = 21/33 (63.64%), Query Frame = 1 Query: 34 SNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132 +NT + ++ + GE + +VG TG+GK+TL Sbjct: 345 ANTKQGVHDVSFTAKAGETVAIVGPTGAGKTTL 377
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: NDVA_RHIL3 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ndvA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11 Identity = 34/107 (31.78%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 305 SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVD 625 S+EE+ ++ E D + + D+ D+ V + G+ S G+RQ + + R +LK + +L +D AT+++D +T+A ++ I T IAHR+ TV + D V+ +D Sbjct: 437 SEEEMRRAAEAAAAADFIETREDRYDTHVGERGNKLSGGERQRIAIARAILKDAPILVLDEATSALDVETEARVKAAIDNLRQNRTTFIIAHRLSTVREADMVLFLD 543 The following BLAST results are available for this feature:
BLAST of EY756579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 387
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756579 ID=EY756579; Name=EY756579; organism=Citrus sinensis; type=EST; length=873bpback to top |