EY756387

Overview
NameEY756387
Unique NameEY756387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2AX_PICAB (Histone H2AX OS=Picea abies PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23
Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 3 
Query:  255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 572
            VSRS +AGLQFPVGR+ R LK               Y AA+LEYL AEVLELAGNA++D K  RI PRH+QLA+R DEEL  L+   TIA GGV+P+IH+ L+ K S
Sbjct:   19 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKS 124
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A1_CANAL (Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 3 
Query:  258 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 572
            SRS++AGL FPVGRVHRLL++              Y  ++LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL+ L+   TIA GGV+P+IH++L+ K S
Sbjct:   17 SRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPV-YLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKS 121
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2AX_CICAR (Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 3 
Query:  255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 566
            VSRSS+AGLQFPVGR+ R LK               Y +A+LEYL AEVLELAGNA++D K  RI PRH+QLA+R DEEL  L+   TIA GGV+P+IH++L+ K
Sbjct:   20 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPV-YLSAVLEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 123
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSJ (Probable histone H2AXb OS=Oryza sativa subsp. japonica GN=Os12g0530000 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 3 
Query:  255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 566
            VSRSS+AGLQFPVGR+ R LK               Y +A+LEYL AEVLELAGNA++D K  RI PRH+QLA+R DEEL  L+   TIA GGV+P+IH++L+ K
Sbjct:   19 VSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPV-YLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPK 122
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSI (Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 3 
Query:  255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 566
            VSRSS+AGLQFPVGR+ R LK               Y +A+LEYL AEVLELAGNA++D K  RI PRH+QLA+R DEEL  L+   TIA GGV+P+IH++L+ K
Sbjct:   19 VSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPV-YLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPK 122
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A2_YEAST (Histone H2A.2 OS=Saccharomyces cerevisiae GN=HTA2 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 60/106 (56.60%), Postives = 75/106 (70.75%), Query Frame = 3 
Query:  258 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 572
            SRS++AGL FPVGRVHRLL+               Y  A+LEYL AE+LELAGNA++D K  RI PRHLQLAIR D+EL+ L+   TIA GGV+P+IH++L+ K S
Sbjct:   18 SRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPV-YLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKS 122
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A2_CANGA (Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = 3 
Query:  258 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE*FVTPSSSR 605
            +RS++AGL FPVGRVHRLL+               Y  A+LEYL AE+LELAGNA++D K  RI PRHLQLAIR D+EL+ L+   TIA GGV+P+IH++L+ K S +    PS+S+
Sbjct:   18 TRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPV-YLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK----PSASQ 129
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A1_YEAST (Histone H2A.1 OS=Saccharomyces cerevisiae GN=HTA1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 60/106 (56.60%), Postives = 75/106 (70.75%), Query Frame = 3 
Query:  258 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 572
            SRS++AGL FPVGRVHRLL+               Y  A+LEYL AE+LELAGNA++D K  RI PRHLQLAIR D+EL+ L+   TIA GGV+P+IH++L+ K S
Sbjct:   18 SRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPV-YLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKS 122
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A1_PICST (Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 3 
Query:  258 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKSS 572
            SRS++AGL FPVGRVHRLL++              Y  ++LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL+ L+   TIA GGV+P+IH++L+ K S
Sbjct:   17 SRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPV-YLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKS 121
[Close]
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A1_PICGU (Histone H2A.1 OS=Pichia guilliermondii GN=HTA1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 3 
Query:  258 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLI 560
            SRS++AGL FPVGR+HRLL++              Y  ++LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL+ L+   TIA GGV+P+IH+SL+
Sbjct:   17 SRSAKAGLTFPVGRIHRLLRKGNYAQRVGSGAPV-YLTSVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLL 117
The following BLAST results are available for this feature:
BLAST of EY756387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
H2AX_PICAB1.675e-2357.01Histone H2AX OS=Picea abies PE=2 SV=1[more]
H2A1_CANAL1.675e-2356.60Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=... [more]
H2AX_CICAR2.187e-2357.14Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1[more]
H2AXB_ORYSJ2.187e-2357.14Probable histone H2AXb OS=Oryza sativa subsp. japo... [more]
H2AXB_ORYSI2.187e-2357.14Probable histone H2AXb OS=Oryza sativa subsp. indi... [more]
H2A2_YEAST2.187e-2356.60Histone H2A.2 OS=Saccharomyces cerevisiae GN=HTA2 ... [more]
H2A2_CANGA2.187e-2352.99Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=... [more]
H2A1_YEAST2.187e-2356.60Histone H2A.1 OS=Saccharomyces cerevisiae GN=HTA1 ... [more]
H2A1_PICST2.187e-2356.60Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1[more]
H2A1_PICGU2.187e-2357.84Histone H2A.1 OS=Pichia guilliermondii GN=HTA1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-A08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756387 ID=EY756387; Name=EY756387; organism=Citrus sinensis; type=EST; length=752bp
CCACGCGTCCGCTCGTTCTCTCTCTCTCTCTCTCTCACACACAAAAATCT
CAAACGCTCGCTTTGCTTTATCTCTTTCTTTCTTCTCCGATAATTTTCAT
CTCAGAAAAAATTAAAAATAATTAAATAAATAATTAATTAATTTAAAAGA
AGCTGTAGCAATTAGGCGGGAAAATGTCGGGCAAAGGAGCCAAAGGACTG
ATAACAGGCAAAACCACCATTAACAACAACAAGGATAAGGACAAGAAGAA
ACCCGTCTCCCGTTCTTCTCGTGCTGGTCTTCAGTTCCCAGTGGGAAGGG
TCCATCGTCTACTAAAGGAAAGGGCTGCTGCTCACGGAAGGGTTGGCGCA
ACAGCTGCTGTTTATACAGCAGCCATTTTGGAATATCTAACTGCCGAAGT
GTTGGAGTTGGCAGGGAATGCTAGCAAGGATTTGAAGGTCAAACGTATTA
CTCCAAGGCATTTGCAGCTTGCTATCCGAGGAGATGAAGAACTTGACACT
CTCATTAAAGGAACCATAGCCGGTGGAGGAGTTATTCCTCATATCCACAA
GTCCCTCATCAATAAATCCTCCAAAGAGTAGTTCGTGACACCGTCATCCT
CTCGGCTTTGTTTATGTGTGTACTTTTAGCTGTGCTGAAATATCTAAATG
AGAAATGATGCCAAAGATGTGTTAATGCTAGGAATCTGCATTTCTCATCC
TCATTTCTGCAGCGACGAATATGGTGCTTGTTTTTTCCCAAAAAAAAAAA
AG
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