EY756387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica GN=OsI_012923 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22 Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINK 566 VSRSS+AGLQFPVGR+ R LK Y +A+LEYL AEVLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+I + L+ K Sbjct: 19 VSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPV-YLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPK 122
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSK 575 V+RS RAGLQFPVGR+ R LK+ Y AA+LEYL AEVLELAGNA++D K RI PRHL LA+R DEEL L+ G TIA GGV+P+I+ L+ K ++ Sbjct: 25 VTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPV-YLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTE 131
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22 Identity = 62/109 (56.88%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE 578 VSRS +AGLQFPVGR+ R LK+ X Y AA+LEYL AEVLELAGNA++D K RI PRH+ LAIR DEEL L+ G TIA GGV+P+I+ L+ K + E Sbjct: 29 VSRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPV-YLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKTAE 136
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A6_WHEAT (Protein H2A.6 OS=Triticum aestivum GN=H2A-3 PE=2 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 1.200e-21 Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 572 V+RS +AGLQFPVGR+ R LK+ Y AA+LEYL AEVLELAGNA+KD K RI PRHL LA+R D+EL L+ G TIA GGVIP+I+ L+ K + Sbjct: 13 VTRSVKAGLQFPVGRIGRYLKKGRYAQAVGSGAPV-YLAAVLEYLAAEVLELAGNAAKDNKKTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLPKKA 118
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A2_PEA (Histone H2A.2 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.568e-21 Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE*FVTPSS 599 V+RS RAGLQFPVGR+ R LK+ Y AA+LEYL AEVLELAGNA++D K RI+PRHL LA+R D EL L+ G TIA GGV+P+I+ L+ K ++ P S Sbjct: 24 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPV-YLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRTESAASAPKS 138
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.568e-21 Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSK 575 V+RS RAGLQFPVGR+ R LK+ Y AA+LEYL AEVLELAGNA++D K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K ++ Sbjct: 24 VTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPV-YLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A_PETCR (Histone H2A OS=Petroselinum crispum PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21 Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE 578 V+RS +AGLQFPVGR+ R LK+ Y AA+LEYL AEVLELAGNA++D K RI PRHL LA+R DEEL L+ G T A GGV+P+I+ L+ K + E Sbjct: 23 VTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPV-YLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKTAE 130
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2AW_MOUSE (Core histone macro-H2A.2 OS=Mus musculus GN=H2afy2 PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21 Identity = 56/105 (53.33%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 566 +SRS+RAG+ FPVGR+ R LK+ Y AA++EYL AE+LELAGNA++D K RI PRH+ LA+ DEEL+ L+KG TIA GGV+P IH L+ K Sbjct: 13 LSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPV-YMAAVIEYLAAEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAK 116
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2AW_HUMAN (Core histone macro-H2A.2 OS=Homo sapiens GN=H2AFY2 PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21 Identity = 56/105 (53.33%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 566 +SRS+RAG+ FPVGR+ R LK+ Y AA++EYL AE+LELAGNA++D K RI PRH+ LA+ DEEL+ L+KG TIA GGV+P IH L+ K Sbjct: 13 LSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPV-YMAAVIEYLAAEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAK 116
BLAST of EY756387 vs. ExPASy Swiss-Prot
Match: H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21 Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 3 Query: 255 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 572 V++S +AGLQFPVGR+ R LK+ Y AA+LEYL AEVLELAGNA++D K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K S Sbjct: 22 VTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPI-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKS 127 The following BLAST results are available for this feature:
BLAST of EY756387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756387 ID=EY756387; Name=EY756387; organism=Citrus sinensis; type=EST; length=752bpback to top |